RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
SREBF1-209ENST00000470247 NDUFC1O43677 76 aa5.47□□□□□ -1.53
SREBF1-209ENST00000470247 LCA10Q71F78 164 aa5.43□□□□□ -1.54
SREBF1-209ENST00000470247 S4R3F8 94 aa5.43□□□□□ -1.54
SREBF1-209ENST00000470247 M0R2T5 61 aa5.41□□□□□ -1.54
SREBF1-209ENST00000470247 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
SREBF1-209ENST00000470247 ACYP2P14621 99 aa5.4□□□□□ -1.54
SREBF1-209ENST00000470247 PCP4P48539 62 aa5.38□□□□□ -1.55
SREBF1-209ENST00000470247 KRTAP9-8Q9BYQ0 159 aa5.36□□□□□ -1.55
SREBF1-209ENST00000470247 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
SREBF1-209ENST00000470247 CSAG1Q6PB30 78 aa5.34□□□□□ -1.55
SREBF1-209ENST00000470247 H3BS24 57 aa5.31□□□□□ -1.56
SREBF1-209ENST00000470247 TMEM258P61165 79 aa5.31□□□□□ -1.56
SREBF1-209ENST00000470247 COA5Q86WW8 74 aa5.31□□□□□ -1.56
SREBF1-209ENST00000470247 MT2AP02795 61 aa5.3□□□□□ -1.56
SREBF1-209ENST00000470247 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
SREBF1-209ENST00000470247 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
SREBF1-209ENST00000470247 ATP5EP56381 51 aaPredicted RBP5.28□□□□□ -1.56
SREBF1-209ENST00000470247 MT1FP04733 61 aa5.27□□□□□ -1.57
SREBF1-209ENST00000470247 CHKB-CPT1BH3BT56 60 aa5.26□□□□□ -1.57
SREBF1-209ENST00000470247 H0YAA0 97 aa5.22□□□□□ -1.57
SREBF1-209ENST00000470247 SPTSSBQ8NFR3 76 aa5.21□□□□□ -1.58
SREBF1-209ENST00000470247 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
SREBF1-209ENST00000470247 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
SREBF1-209ENST00000470247 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
SREBF1-209ENST00000470247 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
SREBF1-209ENST00000470247 P0C880 135 aa5.14□□□□□ -1.59
SREBF1-209ENST00000470247 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
SREBF1-209ENST00000470247 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
SREBF1-209ENST00000470247 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
SREBF1-209ENST00000470247 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
SREBF1-209ENST00000470247 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
SREBF1-209ENST00000470247 SEC61GP60059 68 aa5□□□□□ -1.61
SREBF1-209ENST00000470247 A0A1B0GU69 56 aa4.99□□□□□ -1.61
SREBF1-209ENST00000470247 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
SREBF1-209ENST00000470247 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
SREBF1-209ENST00000470247 SMIM26A0A096LP01 95 aa4.98□□□□□ -1.61
SREBF1-209ENST00000470247 M0QZ58 72 aa4.97□□□□□ -1.61
SREBF1-209ENST00000470247 KRTAP13-4Q3LI77 160 aa4.97□□□□□ -1.61
SREBF1-209ENST00000470247 R4GN34 69 aa4.97□□□□□ -1.61
SREBF1-209ENST00000470247 Q1T7F1 81 aa4.96□□□□□ -1.62
SREBF1-209ENST00000470247 MT1BP07438 61 aa4.95□□□□□ -1.62
SREBF1-209ENST00000470247 A0A1B0GU33 70 aa4.94□□□□□ -1.62
SREBF1-209ENST00000470247 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
SREBF1-209ENST00000470247 V9GYY9 64 aa4.91□□□□□ -1.62
SREBF1-209ENST00000470247 Q5VV11 94 aa4.9□□□□□ -1.63
SREBF1-209ENST00000470247 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
SREBF1-209ENST00000470247 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
SREBF1-209ENST00000470247 PSPHP1O15172 72 aa4.87□□□□□ -1.63
SREBF1-209ENST00000470247 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
SREBF1-209ENST00000470247 USH2AO75445 5202 aa4.87□□□□□ -1.63
SREBF1-209ENST00000470247 A6NN06 94 aa4.82□□□□□ -1.64
SREBF1-209ENST00000470247 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
SREBF1-209ENST00000470247 UQCR11O14957 56 aa4.8□□□□□ -1.64
SREBF1-209ENST00000470247 A0A0D9SG42 100 aa4.79□□□□□ -1.64
SREBF1-209ENST00000470247 A8MU10 97 aa4.79□□□□□ -1.64
SREBF1-209ENST00000470247 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
SREBF1-209ENST00000470247 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
SREBF1-209ENST00000470247 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
SREBF1-209ENST00000470247 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
SREBF1-209ENST00000470247 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
SREBF1-209ENST00000470247 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
SREBF1-209ENST00000470247 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
SREBF1-209ENST00000470247 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
SREBF1-209ENST00000470247 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
SREBF1-209ENST00000470247 MT1XP80297 61 aa4.72□□□□□ -1.65
SREBF1-209ENST00000470247 A6NED7 52 aa4.69□□□□□ -1.66
SREBF1-209ENST00000470247 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
SREBF1-209ENST00000470247 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
SREBF1-209ENST00000470247 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
SREBF1-209ENST00000470247 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
SREBF1-209ENST00000470247 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
SREBF1-209ENST00000470247 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
SREBF1-209ENST00000470247 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.67
SREBF1-209ENST00000470247 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
SREBF1-209ENST00000470247 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
SREBF1-209ENST00000470247 K7ERS5 55 aa4.5□□□□□ -1.69
SREBF1-209ENST00000470247 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
SREBF1-209ENST00000470247 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
SREBF1-209ENST00000470247 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
SREBF1-209ENST00000470247 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
SREBF1-209ENST00000470247 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
SREBF1-209ENST00000470247 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
SREBF1-209ENST00000470247 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
SREBF1-209ENST00000470247 TNP1P09430 55 aa4.37□□□□□ -1.71
SREBF1-209ENST00000470247 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
SREBF1-209ENST00000470247 ROMO1P60602 79 aa4.33□□□□□ -1.72
SREBF1-209ENST00000470247 KMT2DO14686 5537 aa4.32□□□□□ -1.72
SREBF1-209ENST00000470247 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
SREBF1-209ENST00000470247 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
SREBF1-209ENST00000470247 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
SREBF1-209ENST00000470247 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
SREBF1-209ENST00000470247 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
SREBF1-209ENST00000470247 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
SREBF1-209ENST00000470247 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
SREBF1-209ENST00000470247 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
SREBF1-209ENST00000470247 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
SREBF1-209ENST00000470247 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
SREBF1-209ENST00000470247 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
SREBF1-209ENST00000470247 NEBP20929 6669 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms