RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 A0A0D9SG42 100 aa4.24□□□□□ -1.73
TPM3-215ENST00000469717 KRTAP3-3Q9BYR6 98 aa4.23□□□□□ -1.73
TPM3-215ENST00000469717 KRTAP3-2Q9BYR7 98 aa4.23□□□□□ -1.73
TPM3-215ENST00000469717 LCE2DQ5TA82 110 aaPredicted RBP4.23□□□□□ -1.73
TPM3-215ENST00000469717 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
TPM3-215ENST00000469717 FAT1Q14517 4588 aa4.22□□□□□ -1.73
TPM3-215ENST00000469717 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.73
TPM3-215ENST00000469717 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
TPM3-215ENST00000469717 MYCBP2O75592 4640 aa4.16□□□□□ -1.74
TPM3-215ENST00000469717 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
TPM3-215ENST00000469717 HSPG2P98160 4391 aa4.13□□□□□ -1.75
TPM3-215ENST00000469717 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
TPM3-215ENST00000469717 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
TPM3-215ENST00000469717 DYNC1H1Q14204 4646 aaKnown RBP4.12□□□□□ -1.75
TPM3-215ENST00000469717 A0A1B0GVY2 172 aa4.09□□□□□ -1.75
TPM3-215ENST00000469717 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
TPM3-215ENST00000469717 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
TPM3-215ENST00000469717 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
TPM3-215ENST00000469717 LRP1Q07954 4544 aaKnown RBP4.07□□□□□ -1.76
TPM3-215ENST00000469717 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
TPM3-215ENST00000469717 RYR3Q15413 4870 aa4.06□□□□□ -1.76
TPM3-215ENST00000469717 KRTAP10-8P60410 259 aa4.05□□□□□ -1.76
TPM3-215ENST00000469717 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
TPM3-215ENST00000469717 M0R2T5 61 aa4.04□□□□□ -1.76
TPM3-215ENST00000469717 KIAA1109Q2LD37 5005 aa4.04□□□□□ -1.76
TPM3-215ENST00000469717 S4R3F8 94 aa4.04□□□□□ -1.76
TPM3-215ENST00000469717 LPAP08519 4548 aa4.03□□□□□ -1.76
TPM3-215ENST00000469717 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
TPM3-215ENST00000469717 KRTAP4-5Q9BYR2 181 aa4.01□□□□□ -1.77
TPM3-215ENST00000469717 RYR2Q92736 4967 aa3.99□□□□□ -1.77
TPM3-215ENST00000469717 FAT3Q8TDW7 4589 aa3.99□□□□□ -1.77
TPM3-215ENST00000469717 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
TPM3-215ENST00000469717 RYR1P21817 5038 aa3.95□□□□□ -1.78
TPM3-215ENST00000469717 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
TPM3-215ENST00000469717 TNXBP22105 4242 aa3.92□□□□□ -1.78
TPM3-215ENST00000469717 XP32Q5T750 250 aa3.92□□□□□ -1.78
TPM3-215ENST00000469717 LRP2P98164 4655 aa3.91□□□□□ -1.78
TPM3-215ENST00000469717 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
TPM3-215ENST00000469717 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
TPM3-215ENST00000469717 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
TPM3-215ENST00000469717 M0QZ58 72 aa3.79□□□□□ -1.8
TPM3-215ENST00000469717 LORP23490 312 aaPredicted RBP3.77□□□□□ -1.81
TPM3-215ENST00000469717 HERC2O95714 4834 aa3.76□□□□□ -1.81
TPM3-215ENST00000469717 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
TPM3-215ENST00000469717 BIRC6Q9NR09 4857 aa3.76□□□□□ -1.81
TPM3-215ENST00000469717 KRTAP17-1Q9BYP8 105 aa3.75□□□□□ -1.81
TPM3-215ENST00000469717 R4GN34 69 aa3.73□□□□□ -1.81
TPM3-215ENST00000469717 ABCA13Q86UQ4 5058 aa3.73□□□□□ -1.81
TPM3-215ENST00000469717 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
TPM3-215ENST00000469717 MUC2Q02817 5179 aa3.64□□□□□ -1.83
TPM3-215ENST00000469717 LCE2BO14633 110 aa3.6□□□□□ -1.83
TPM3-215ENST00000469717 MUC17Q685J3 4493 aa3.59□□□□□ -1.84
TPM3-215ENST00000469717 KRTAP10-10P60014 251 aa3.59□□□□□ -1.84
TPM3-215ENST00000469717 HERC1Q15751 4861 aa3.58□□□□□ -1.84
TPM3-215ENST00000469717 INE1O15225 51 aa3.57□□□□□ -1.84
TPM3-215ENST00000469717 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
TPM3-215ENST00000469717 RNF213Q63HN8 5207 aa3.55□□□□□ -1.84
TPM3-215ENST00000469717 KRTAP4-1Q9BYQ7 146 aa3.54□□□□□ -1.84
TPM3-215ENST00000469717 LCE2CQ5TA81 110 aa3.53□□□□□ -1.84
TPM3-215ENST00000469717 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
TPM3-215ENST00000469717 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
TPM3-215ENST00000469717 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
TPM3-215ENST00000469717 FAT4Q6V0I7 4981 aa3.44□□□□□ -1.86
TPM3-215ENST00000469717 KRTAP19-2Q3LHN2 52 aa3.42□□□□□ -1.86
TPM3-215ENST00000469717 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
TPM3-215ENST00000469717 TNP1P09430 55 aa3.42□□□□□ -1.86
TPM3-215ENST00000469717 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
TPM3-215ENST00000469717 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
TPM3-215ENST00000469717 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.87
TPM3-215ENST00000469717 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
TPM3-215ENST00000469717 MT1HP80294 61 aa3.24□□□□□ -1.89
TPM3-215ENST00000469717 KRTAP19-1Q8IUB9 90 aa3.22□□□□□ -1.89
TPM3-215ENST00000469717 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
TPM3-215ENST00000469717 MT2AP02795 61 aa3.15□□□□□ -1.91
TPM3-215ENST00000469717 MT1FP04733 61 aa3.14□□□□□ -1.91
TPM3-215ENST00000469717 KRTAP8-1Q8IUC2 63 aa3.11□□□□□ -1.91
TPM3-215ENST00000469717 KMT2DO14686 5537 aa3.11□□□□□ -1.91
TPM3-215ENST00000469717 KRTAP12-3P60328 96 aa3.09□□□□□ -1.92
TPM3-215ENST00000469717 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
TPM3-215ENST00000469717 USH2AO75445 5202 aa3.07□□□□□ -1.92
TPM3-215ENST00000469717 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
TPM3-215ENST00000469717 MT1XP80297 61 aa3.05□□□□□ -1.92
TPM3-215ENST00000469717 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
TPM3-215ENST00000469717 MT1BP07438 61 aa3.01□□□□□ -1.93
TPM3-215ENST00000469717 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
TPM3-215ENST00000469717 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
TPM3-215ENST00000469717 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
TPM3-215ENST00000469717 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
TPM3-215ENST00000469717 CRCT1Q9UGL9 99 aa2.94□□□□□ -1.94
TPM3-215ENST00000469717 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
TPM3-215ENST00000469717 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
TPM3-215ENST00000469717 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
TPM3-215ENST00000469717 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.94
TPM3-215ENST00000469717 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
TPM3-215ENST00000469717 KRTAP4-7Q9BYR0 210 aa2.89□□□□□ -1.95
TPM3-215ENST00000469717 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
TPM3-215ENST00000469717 KRTAP4-8A0A0G2JLE6 195 aa2.87□□□□□ -1.95
TPM3-215ENST00000469717 KRTAP4-8Q9BYQ9 185 aa2.87□□□□□ -1.95
TPM3-215ENST00000469717 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
TPM3-215ENST00000469717 KRTAP9-2Q9BYQ4 174 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms