RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
SMC1A-205ENST00000469129 LPAP08519 4548 aa4.82□□□□□ -1.64
SMC1A-205ENST00000469129 PSPHP1O15172 72 aa4.81□□□□□ -1.64
SMC1A-205ENST00000469129 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
SMC1A-205ENST00000469129 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
SMC1A-205ENST00000469129 Q5VV11 94 aa4.78□□□□□ -1.64
SMC1A-205ENST00000469129 A0A1B0GU69 56 aa4.77□□□□□ -1.65
SMC1A-205ENST00000469129 SEC61GP60059 68 aa4.75□□□□□ -1.65
SMC1A-205ENST00000469129 S4R3F8 94 aa4.75□□□□□ -1.65
SMC1A-205ENST00000469129 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
SMC1A-205ENST00000469129 H1FX-AS1Q4G0G2 97 aa4.74□□□□□ -1.65
SMC1A-205ENST00000469129 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
SMC1A-205ENST00000469129 A6NED7 52 aa4.72□□□□□ -1.65
SMC1A-205ENST00000469129 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
SMC1A-205ENST00000469129 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
SMC1A-205ENST00000469129 LCA10Q71F78 164 aa4.69□□□□□ -1.66
SMC1A-205ENST00000469129 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
SMC1A-205ENST00000469129 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
SMC1A-205ENST00000469129 UQCR11O14957 56 aa4.65□□□□□ -1.67
SMC1A-205ENST00000469129 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
SMC1A-205ENST00000469129 CSAG1Q6PB30 78 aa4.62□□□□□ -1.67
SMC1A-205ENST00000469129 KRTAP4-1Q9BYQ7 146 aa4.61□□□□□ -1.67
SMC1A-205ENST00000469129 MUC2Q02817 5179 aa4.6□□□□□ -1.67
SMC1A-205ENST00000469129 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
SMC1A-205ENST00000469129 A0A1B0GU33 70 aa4.58□□□□□ -1.68
SMC1A-205ENST00000469129 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
SMC1A-205ENST00000469129 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
SMC1A-205ENST00000469129 H0YAA0 97 aa4.55□□□□□ -1.68
SMC1A-205ENST00000469129 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
SMC1A-205ENST00000469129 A8MU10 97 aa4.51□□□□□ -1.69
SMC1A-205ENST00000469129 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
SMC1A-205ENST00000469129 ADM2Q7Z4H4 148 aa4.51□□□□□ -1.69
SMC1A-205ENST00000469129 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
SMC1A-205ENST00000469129 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
SMC1A-205ENST00000469129 P0C880 135 aa4.46□□□□□ -1.7
SMC1A-205ENST00000469129 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
SMC1A-205ENST00000469129 K7ERS5 55 aa4.44□□□□□ -1.7
SMC1A-205ENST00000469129 M0QZ58 72 aa4.44□□□□□ -1.7
SMC1A-205ENST00000469129 A6NN06 94 aa4.41□□□□□ -1.7
SMC1A-205ENST00000469129 KRTAP13-4Q3LI77 160 aa4.39□□□□□ -1.71
SMC1A-205ENST00000469129 LCE2CQ5TA81 110 aa4.38□□□□□ -1.71
SMC1A-205ENST00000469129 R4GN34 69 aa4.38□□□□□ -1.71
SMC1A-205ENST00000469129 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
SMC1A-205ENST00000469129 A0A0D9SG42 100 aa4.35□□□□□ -1.71
SMC1A-205ENST00000469129 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
SMC1A-205ENST00000469129 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
SMC1A-205ENST00000469129 M0R2T5 61 aa4.33□□□□□ -1.72
SMC1A-205ENST00000469129 MT1HP80294 61 aa4.32□□□□□ -1.72
SMC1A-205ENST00000469129 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
SMC1A-205ENST00000469129 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
SMC1A-205ENST00000469129 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
SMC1A-205ENST00000469129 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
SMC1A-205ENST00000469129 LORP23490 312 aaPredicted RBP4.25□□□□□ -1.73
SMC1A-205ENST00000469129 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
SMC1A-205ENST00000469129 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
SMC1A-205ENST00000469129 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
SMC1A-205ENST00000469129 ROMO1P60602 79 aa4.21□□□□□ -1.74
SMC1A-205ENST00000469129 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
SMC1A-205ENST00000469129 MT2AP02795 61 aa4.18□□□□□ -1.74
SMC1A-205ENST00000469129 KRTAP10-10P60014 251 aa4.16□□□□□ -1.74
SMC1A-205ENST00000469129 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
SMC1A-205ENST00000469129 MT1FP04733 61 aa4.14□□□□□ -1.75
SMC1A-205ENST00000469129 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
SMC1A-205ENST00000469129 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
SMC1A-205ENST00000469129 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
SMC1A-205ENST00000469129 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.75
SMC1A-205ENST00000469129 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
SMC1A-205ENST00000469129 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
SMC1A-205ENST00000469129 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
SMC1A-205ENST00000469129 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
SMC1A-205ENST00000469129 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
SMC1A-205ENST00000469129 LCE3BQ5TA77 95 aa4□□□□□ -1.77
SMC1A-205ENST00000469129 KRTAP9-3Q9BYQ3 159 aa4□□□□□ -1.77
SMC1A-205ENST00000469129 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
SMC1A-205ENST00000469129 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
SMC1A-205ENST00000469129 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
SMC1A-205ENST00000469129 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
SMC1A-205ENST00000469129 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
SMC1A-205ENST00000469129 MT1BP07438 61 aa3.94□□□□□ -1.78
SMC1A-205ENST00000469129 TNP1P09430 55 aa3.94□□□□□ -1.78
SMC1A-205ENST00000469129 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
SMC1A-205ENST00000469129 USH2AO75445 5202 aa3.92□□□□□ -1.78
SMC1A-205ENST00000469129 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
SMC1A-205ENST00000469129 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
SMC1A-205ENST00000469129 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
SMC1A-205ENST00000469129 MT1XP80297 61 aa3.84□□□□□ -1.79
SMC1A-205ENST00000469129 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
SMC1A-205ENST00000469129 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
SMC1A-205ENST00000469129 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
SMC1A-205ENST00000469129 KRTAP19-6Q3LI70 58 aa3.77□□□□□ -1.81
SMC1A-205ENST00000469129 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
SMC1A-205ENST00000469129 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
SMC1A-205ENST00000469129 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
SMC1A-205ENST00000469129 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
SMC1A-205ENST00000469129 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
SMC1A-205ENST00000469129 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
SMC1A-205ENST00000469129 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
SMC1A-205ENST00000469129 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
SMC1A-205ENST00000469129 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
SMC1A-205ENST00000469129 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms