RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
ABCF3-207ENST00000468892 S4R3F8 94 aa9.4□□□□□ -0.9
ABCF3-207ENST00000468892 LINC01558Q9Y6Z2 57 aa9.37□□□□□ -0.91
ABCF3-207ENST00000468892 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
ABCF3-207ENST00000468892 PRR15LQ9BU68 103 aa9.32□□□□□ -0.92
ABCF3-207ENST00000468892 LCA10Q71F78 164 aa9.31□□□□□ -0.92
ABCF3-207ENST00000468892 SEC61GP60059 68 aa9.28□□□□□ -0.92
ABCF3-207ENST00000468892 A0A1B0GU69 56 aa9.25□□□□□ -0.93
ABCF3-207ENST00000468892 PSPHP1O15172 72 aa9.24□□□□□ -0.93
ABCF3-207ENST00000468892 CSAG1Q6PB30 78 aa9.24□□□□□ -0.93
ABCF3-207ENST00000468892 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
ABCF3-207ENST00000468892 KRTAP19-2Q3LHN2 52 aa9.16□□□□□ -0.94
ABCF3-207ENST00000468892 Q5VV11 94 aa9.15□□□□□ -0.94
ABCF3-207ENST00000468892 KRTAP9-2Q9BYQ4 174 aa9.04□□□□□ -0.96
ABCF3-207ENST00000468892 A6NED7 52 aa9.03□□□□□ -0.96
ABCF3-207ENST00000468892 H0YAA0 97 aa9.01□□□□□ -0.97
ABCF3-207ENST00000468892 UQCR11O14957 56 aa8.99□□□□□ -0.97
ABCF3-207ENST00000468892 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
ABCF3-207ENST00000468892 A0A1B0GU33 70 aa8.96□□□□□ -0.98
ABCF3-207ENST00000468892 ADM2Q7Z4H4 148 aa8.96□□□□□ -0.98
ABCF3-207ENST00000468892 KRTAP9-6A0A140TA67 174 aa8.93□□□□□ -0.98
ABCF3-207ENST00000468892 MUC2Q02817 5179 aa8.91□□□□□ -0.98
ABCF3-207ENST00000468892 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
ABCF3-207ENST00000468892 BRK1Q8WUW1 75 aa8.91□□□□□ -0.98
ABCF3-207ENST00000468892 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
ABCF3-207ENST00000468892 KRTAP10-6P60371 365 aaPredicted RBP8.9□□□□□ -0.98
ABCF3-207ENST00000468892 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
ABCF3-207ENST00000468892 FLGP20930 4061 aaPredicted RBP8.87□□□□□ -0.99
ABCF3-207ENST00000468892 M0R2T5 61 aa8.86□□□□□ -0.99
ABCF3-207ENST00000468892 CDC42SE1Q9NRR8 79 aa8.86□□□□□ -0.99
ABCF3-207ENST00000468892 P0C880 135 aa8.84□□□□□ -0.99
ABCF3-207ENST00000468892 SPATA8Q6RVD6 105 aa8.84□□□□□ -0.99
ABCF3-207ENST00000468892 MT1HP80294 61 aa8.83□□□□□ -1
ABCF3-207ENST00000468892 M0QZ58 72 aa8.77□□□□□ -1.01
ABCF3-207ENST00000468892 PRO0628Q9UI54 55 aa8.75□□□□□ -1.01
ABCF3-207ENST00000468892 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
ABCF3-207ENST00000468892 R4GN34 69 aa8.69□□□□□ -1.02
ABCF3-207ENST00000468892 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
ABCF3-207ENST00000468892 A8MU10 97 aa8.62□□□□□ -1.03
ABCF3-207ENST00000468892 KRTAP13-4Q3LI77 160 aa8.62□□□□□ -1.03
ABCF3-207ENST00000468892 K7ERS5 55 aa8.6□□□□□ -1.03
ABCF3-207ENST00000468892 A0A0D9SG42 100 aa8.55□□□□□ -1.04
ABCF3-207ENST00000468892 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
ABCF3-207ENST00000468892 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
ABCF3-207ENST00000468892 KRTAP9-8Q9BYQ0 159 aa8.49□□□□□ -1.05
ABCF3-207ENST00000468892 FSIP2Q5CZC0 6907 aa8.48□□□□□ -1.05
ABCF3-207ENST00000468892 MT2AP02795 61 aa8.48□□□□□ -1.05
ABCF3-207ENST00000468892 LINC01554Q52M75 96 aa8.48□□□□□ -1.05
ABCF3-207ENST00000468892 PMAIP1Q13794 54 aa8.46□□□□□ -1.06
ABCF3-207ENST00000468892 CRCT1Q9UGL9 99 aa8.46□□□□□ -1.06
ABCF3-207ENST00000468892 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
ABCF3-207ENST00000468892 MT1FP04733 61 aa8.41□□□□□ -1.06
ABCF3-207ENST00000468892 A6NN06 94 aa8.4□□□□□ -1.06
ABCF3-207ENST00000468892 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
ABCF3-207ENST00000468892 SPRR2GQ9BYE4 73 aa8.37□□□□□ -1.07
ABCF3-207ENST00000468892 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
ABCF3-207ENST00000468892 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
ABCF3-207ENST00000468892 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
ABCF3-207ENST00000468892 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
ABCF3-207ENST00000468892 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
ABCF3-207ENST00000468892 CAMK2N1Q7Z7J9 78 aa8.16□□□□□ -1.1
ABCF3-207ENST00000468892 KRTAP19-8Q3LI54 63 aa8.15□□□□□ -1.1
ABCF3-207ENST00000468892 ROMO1P60602 79 aa8.13□□□□□ -1.11
ABCF3-207ENST00000468892 KTN1-AS1Q86SY8 53 aa8.1□□□□□ -1.11
ABCF3-207ENST00000468892 SVIPQ8NHG7 77 aa7.97□□□□□ -1.13
ABCF3-207ENST00000468892 KRTAP9-7A8MTY7 169 aa7.97□□□□□ -1.13
ABCF3-207ENST00000468892 MT1BP07438 61 aa7.97□□□□□ -1.13
ABCF3-207ENST00000468892 LCE2BO14633 110 aa7.92□□□□□ -1.14
ABCF3-207ENST00000468892 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
ABCF3-207ENST00000468892 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.87□□□□□ -1.15
ABCF3-207ENST00000468892 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
ABCF3-207ENST00000468892 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
ABCF3-207ENST00000468892 PRAC1Q96KF2 57 aa7.8□□□□□ -1.16
ABCF3-207ENST00000468892 TNP1P09430 55 aa7.77□□□□□ -1.17
ABCF3-207ENST00000468892 SSPOA2VEC9 5147 aa7.73□□□□□ -1.17
ABCF3-207ENST00000468892 MT1XP80297 61 aa7.72□□□□□ -1.17
ABCF3-207ENST00000468892 KRTAP10-5P60370 271 aa7.71□□□□□ -1.18
ABCF3-207ENST00000468892 USH2AO75445 5202 aa7.69□□□□□ -1.18
ABCF3-207ENST00000468892 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
ABCF3-207ENST00000468892 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
ABCF3-207ENST00000468892 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
ABCF3-207ENST00000468892 KRTAP19-6Q3LI70 58 aa7.51□□□□□ -1.21
ABCF3-207ENST00000468892 SYNE2Q8WXH0 6885 aaKnown RBP7.45□□□□□ -1.22
ABCF3-207ENST00000468892 MACF1Q9UPN3 7388 aaKnown RBP7.42□□□□□ -1.22
ABCF3-207ENST00000468892 KRTAP10-12P60413 245 aa7.41□□□□□ -1.22
ABCF3-207ENST00000468892 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
ABCF3-207ENST00000468892 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
ABCF3-207ENST00000468892 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
ABCF3-207ENST00000468892 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
ABCF3-207ENST00000468892 NEBP20929 6669 aa7.09□□□□□ -1.27
ABCF3-207ENST00000468892 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
ABCF3-207ENST00000468892 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
ABCF3-207ENST00000468892 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
ABCF3-207ENST00000468892 KRTAP19-5Q3LI72 72 aa7□□□□□ -1.29
ABCF3-207ENST00000468892 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
ABCF3-207ENST00000468892 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.29
ABCF3-207ENST00000468892 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
ABCF3-207ENST00000468892 KRTAP19-7Q3SYF9 63 aa6.87□□□□□ -1.31
ABCF3-207ENST00000468892 KRTAP19-4Q3LI73 84 aa6.81□□□□□ -1.32
ABCF3-207ENST00000468892 MT1EP04732 61 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 642.2 ms