RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SERP2Q8N6R1 65 aa3.05□□□□□ -1.92
USP39-213ENST00000467885 TRAV22A0A0B4J277 110 aa3.04□□□□□ -1.92
USP39-213ENST00000467885 H0Y9P7 68 aa3.04□□□□□ -1.92
USP39-213ENST00000467885 HRES1P13985 223 aa3.04□□□□□ -1.92
USP39-213ENST00000467885 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
USP39-213ENST00000467885 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
USP39-213ENST00000467885 LINC00208Q96KT6 92 aa3.04□□□□□ -1.92
USP39-213ENST00000467885 MUC2Q02817 5179 aa3.04□□□□□ -1.92
USP39-213ENST00000467885 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
USP39-213ENST00000467885 IGKV2D-30A0A075B6S6 120 aa3.02□□□□□ -1.93
USP39-213ENST00000467885 A0A0U1RQV1 116 aa3.02□□□□□ -1.93
USP39-213ENST00000467885 H3BPC8 53 aa3.02□□□□□ -1.93
USP39-213ENST00000467885 MP68P56378 58 aa3.02□□□□□ -1.93
USP39-213ENST00000467885 LOC101927531A0A1B0GV80 90 aa3.01□□□□□ -1.93
USP39-213ENST00000467885 COX7CP15954 63 aa3.01□□□□□ -1.93
USP39-213ENST00000467885 KLKP1Q107X0 134 aa3.01□□□□□ -1.93
USP39-213ENST00000467885 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
USP39-213ENST00000467885 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
USP39-213ENST00000467885 C7orf65Q6ZTY9 151 aa3□□□□□ -1.93
USP39-213ENST00000467885 KRTAP10-7P60409 375 aaPredicted RBP2.99□□□□□ -1.93
USP39-213ENST00000467885 C4orf26Q17RF5 130 aa2.99□□□□□ -1.93
USP39-213ENST00000467885 C20orf197Q8N268 126 aa2.99□□□□□ -1.93
USP39-213ENST00000467885 ANAPC13Q9BS18 74 aa2.99□□□□□ -1.93
USP39-213ENST00000467885 SNURFQ9Y675 71 aa2.99□□□□□ -1.93
USP39-213ENST00000467885 COX6B2Q6YFQ2 88 aa2.98□□□□□ -1.93
USP39-213ENST00000467885 CCDC179H3BU77 68 aa2.96□□□□□ -1.94
USP39-213ENST00000467885 CYSTM1Q9H1C7 97 aa2.96□□□□□ -1.94
USP39-213ENST00000467885 RBM12B-AS1Q9P1G2 102 aa2.95□□□□□ -1.94
USP39-213ENST00000467885 H1FX-AS1Q4G0G2 97 aa2.94□□□□□ -1.94
USP39-213ENST00000467885 FAT4Q6V0I7 4981 aa2.93□□□□□ -1.94
USP39-213ENST00000467885 H7BZZ5 65 aa2.93□□□□□ -1.94
USP39-213ENST00000467885 MT1HP80294 61 aa2.93□□□□□ -1.94
USP39-213ENST00000467885 KRTAP10-6P60371 365 aaPredicted RBP2.92□□□□□ -1.94
USP39-213ENST00000467885 NDUFC1O43677 76 aa2.91□□□□□ -1.94
USP39-213ENST00000467885 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
USP39-213ENST00000467885 FAM236DA0A1B0GTK5 79 aa2.9□□□□□ -1.95
USP39-213ENST00000467885 FAM236CP0DP71 79 aa2.9□□□□□ -1.95
USP39-213ENST00000467885 A8MUN3 132 aa2.89□□□□□ -1.95
USP39-213ENST00000467885 DMAC1Q96GE9 116 aa2.89□□□□□ -1.95
USP39-213ENST00000467885 ACYP2P14621 99 aa2.88□□□□□ -1.95
USP39-213ENST00000467885 LCA10Q71F78 164 aa2.87□□□□□ -1.95
USP39-213ENST00000467885 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
USP39-213ENST00000467885 SMIM26A0A096LP01 95 aa2.85□□□□□ -1.95
USP39-213ENST00000467885 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
USP39-213ENST00000467885 S4R3F8 94 aa2.84□□□□□ -1.95
USP39-213ENST00000467885 CSAG1Q6PB30 78 aa2.83□□□□□ -1.96
USP39-213ENST00000467885 M0R2T5 61 aa2.82□□□□□ -1.96
USP39-213ENST00000467885 TMEM258P61165 79 aa2.81□□□□□ -1.96
USP39-213ENST00000467885 COA5Q86WW8 74 aa2.8□□□□□ -1.96
USP39-213ENST00000467885 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
USP39-213ENST00000467885 MT2AP02795 61 aa2.78□□□□□ -1.96
USP39-213ENST00000467885 ATP5EP56381 51 aaPredicted RBP2.78□□□□□ -1.96
USP39-213ENST00000467885 CHKB-CPT1BH3BT56 60 aa2.77□□□□□ -1.97
USP39-213ENST00000467885 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
USP39-213ENST00000467885 H0YAA0 97 aa2.76□□□□□ -1.97
USP39-213ENST00000467885 MT1FP04733 61 aa2.76□□□□□ -1.97
USP39-213ENST00000467885 PSPHP1O15172 72 aa2.75□□□□□ -1.97
USP39-213ENST00000467885 RPS28P62857 69 aaKnown RBP2.75□□□□□ -1.97
USP39-213ENST00000467885 SPTSSBQ8NFR3 76 aa2.75□□□□□ -1.97
USP39-213ENST00000467885 SERP1Q9Y6X1 66 aa2.75□□□□□ -1.97
USP39-213ENST00000467885 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
USP39-213ENST00000467885 P0C880 135 aa2.73□□□□□ -1.97
USP39-213ENST00000467885 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
USP39-213ENST00000467885 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
USP39-213ENST00000467885 LINC01558Q9Y6Z2 57 aa2.69□□□□□ -1.98
USP39-213ENST00000467885 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
USP39-213ENST00000467885 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
USP39-213ENST00000467885 Q1T7F1 81 aa2.66□□□□□ -1.98
USP39-213ENST00000467885 CAMK2N1Q7Z7J9 78 aa2.66□□□□□ -1.98
USP39-213ENST00000467885 A0A1B0GU69 56 aa2.65□□□□□ -1.99
USP39-213ENST00000467885 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
USP39-213ENST00000467885 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
USP39-213ENST00000467885 KRTAP19-8Q3LI54 63 aa2.64□□□□□ -1.99
USP39-213ENST00000467885 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
USP39-213ENST00000467885 A0A1B0GU33 70 aa2.63□□□□□ -1.99
USP39-213ENST00000467885 M0QZ58 72 aa2.63□□□□□ -1.99
USP39-213ENST00000467885 MT1BP07438 61 aa2.61□□□□□ -1.99
USP39-213ENST00000467885 R4GN34 69 aa2.61□□□□□ -1.99
USP39-213ENST00000467885 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
USP39-213ENST00000467885 Q5VV11 94 aa2.59□□□□□ -1.99
USP39-213ENST00000467885 PRR15LQ9BU68 103 aa2.59□□□□□ -1.99
USP39-213ENST00000467885 LUZP6Q538Z0 58 aa2.58□□□□□ -2
USP39-213ENST00000467885 USH2AO75445 5202 aa2.57□□□□□ -2
USP39-213ENST00000467885 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
USP39-213ENST00000467885 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
USP39-213ENST00000467885 FSIP2Q5CZC0 6907 aa2.56□□□□□ -2
USP39-213ENST00000467885 A8MU10 97 aa2.55□□□□□ -2
USP39-213ENST00000467885 UQCR11O14957 56 aa2.55□□□□□ -2
USP39-213ENST00000467885 KRTAP5-9P26371 169 aa2.55□□□□□ -2
USP39-213ENST00000467885 LINC01554Q52M75 96 aa2.55□□□□□ -2
USP39-213ENST00000467885 A6NN06 94 aa2.54□□□□□ -2
USP39-213ENST00000467885 A0A0D9SG42 100 aa2.53□□□□□ -2
USP39-213ENST00000467885 A6NED7 52 aa2.53□□□□□ -2
USP39-213ENST00000467885 K7ERS5 55 aa2.53□□□□□ -2
USP39-213ENST00000467885 KRTAP12-1P59990 96 aa2.53□□□□□ -2
USP39-213ENST00000467885 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
USP39-213ENST00000467885 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
USP39-213ENST00000467885 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
USP39-213ENST00000467885 KRTAP12-2P59991 146 aa2.51□□□□□ -2.01
USP39-213ENST00000467885 CRCT1Q9UGL9 99 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms