RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 H3BPC8 53 aa12.02□□□□□ -0.49
PDCD4-205ENST00000467574 A8MUN3 132 aa11.97□□□□□ -0.49
PDCD4-205ENST00000467574 FAM236AA0A1B0GUQ0 79 aa11.96□□□□□ -0.49
PDCD4-205ENST00000467574 FAM236BA0A1B0GV22 79 aa11.96□□□□□ -0.49
PDCD4-205ENST00000467574 TRAV7A0A075B6U4 112 aa11.86□□□□□ -0.51
PDCD4-205ENST00000467574 KRTAP19-1Q8IUB9 90 aa11.85□□□□□ -0.51
PDCD4-205ENST00000467574 SMIM20Q8N5G0 67 aa11.85□□□□□ -0.51
PDCD4-205ENST00000467574 NDUFC1O43677 76 aa11.82□□□□□ -0.52
PDCD4-205ENST00000467574 FCGBPQ9Y6R7 5405 aaPredicted RBP11.81□□□□□ -0.52
PDCD4-205ENST00000467574 DMAC1Q96GE9 116 aa11.79□□□□□ -0.52
PDCD4-205ENST00000467574 KRTAP19-6Q3LI70 58 aa11.72□□□□□ -0.53
PDCD4-205ENST00000467574 SPRR2GQ9BYE4 73 aa11.72□□□□□ -0.53
PDCD4-205ENST00000467574 H0YAA0 97 aa11.7□□□□□ -0.54
PDCD4-205ENST00000467574 KRTAP19-8Q3LI54 63 aa11.61□□□□□ -0.55
PDCD4-205ENST00000467574 SNURFQ9Y675 71 aa11.6□□□□□ -0.55
PDCD4-205ENST00000467574 MT1BP07438 61 aa11.59□□□□□ -0.55
PDCD4-205ENST00000467574 SERP2Q8N6R1 65 aa11.58□□□□□ -0.56
PDCD4-205ENST00000467574 CRIPTQ9P021 101 aa11.58□□□□□ -0.56
PDCD4-205ENST00000467574 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.55□□□□□ -0.56
PDCD4-205ENST00000467574 ADM2Q7Z4H4 148 aa11.55□□□□□ -0.56
PDCD4-205ENST00000467574 Q5VV11 94 aa11.51□□□□□ -0.57
PDCD4-205ENST00000467574 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
PDCD4-205ENST00000467574 ACYP2P14621 99 aa11.48□□□□□ -0.57
PDCD4-205ENST00000467574 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
PDCD4-205ENST00000467574 P0C880 135 aa11.39□□□□□ -0.59
PDCD4-205ENST00000467574 KRTAP3-2Q9BYR7 98 aa11.37□□□□□ -0.59
PDCD4-205ENST00000467574 COX7CP15954 63 aa11.31□□□□□ -0.6
PDCD4-205ENST00000467574 KRTAP9-7A8MTY7 169 aa11.28□□□□□ -0.6
PDCD4-205ENST00000467574 MACF1Q9UPN3 7388 aaKnown RBP11.28□□□□□ -0.6
PDCD4-205ENST00000467574 CHKB-CPT1BH3BT56 60 aa11.25□□□□□ -0.61
PDCD4-205ENST00000467574 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
PDCD4-205ENST00000467574 A6NN06 94 aa11.23□□□□□ -0.61
PDCD4-205ENST00000467574 KRTAP10-5P60370 271 aa11.22□□□□□ -0.61
PDCD4-205ENST00000467574 R4GN34 69 aa11.2□□□□□ -0.62
PDCD4-205ENST00000467574 CYSTM1Q9H1C7 97 aa11.18□□□□□ -0.62
PDCD4-205ENST00000467574 M0QZ58 72 aa11.15□□□□□ -0.62
PDCD4-205ENST00000467574 H7BZZ5 65 aa11.12□□□□□ -0.63
PDCD4-205ENST00000467574 SYNE2Q8WXH0 6885 aaKnown RBP11.09□□□□□ -0.63
PDCD4-205ENST00000467574 COA5Q86WW8 74 aa11.07□□□□□ -0.64
PDCD4-205ENST00000467574 ANAPC13Q9BS18 74 aa11.05□□□□□ -0.64
PDCD4-205ENST00000467574 PLAC4Q8WY50 150 aa10.96□□□□□ -0.65
PDCD4-205ENST00000467574 MT1XP80297 61 aa10.95□□□□□ -0.66
PDCD4-205ENST00000467574 LINC01554Q52M75 96 aa10.95□□□□□ -0.66
PDCD4-205ENST00000467574 KRTAP6-3Q3LI67 103 aa10.89□□□□□ -0.67
PDCD4-205ENST00000467574 CCDC179H3BU77 68 aa10.88□□□□□ -0.67
PDCD4-205ENST00000467574 PRO2289Q9P1D8 64 aa10.84□□□□□ -0.67
PDCD4-205ENST00000467574 KRTAP13-4Q3LI77 160 aa10.8□□□□□ -0.68
PDCD4-205ENST00000467574 SEC61GP60059 68 aa10.65□□□□□ -0.7
PDCD4-205ENST00000467574 KMT2DO14686 5537 aa10.64□□□□□ -0.71
PDCD4-205ENST00000467574 SERP1Q9Y6X1 66 aa10.64□□□□□ -0.71
PDCD4-205ENST00000467574 ATP5EP56381 51 aaPredicted RBP10.61□□□□□ -0.71
PDCD4-205ENST00000467574 KRTAP12-2P59991 146 aa10.59□□□□□ -0.71
PDCD4-205ENST00000467574 MUC12Q9UKN1 5478 aa10.57□□□□□ -0.72
PDCD4-205ENST00000467574 KRTAP5-9P26371 169 aa10.57□□□□□ -0.72
PDCD4-205ENST00000467574 A0A1B0GU33 70 aa10.5□□□□□ -0.73
PDCD4-205ENST00000467574 SPATA8Q6RVD6 105 aa10.48□□□□□ -0.73
PDCD4-205ENST00000467574 TMEM258P61165 79 aa10.46□□□□□ -0.73
PDCD4-205ENST00000467574 A0A1B0GU69 56 aa10.44□□□□□ -0.74
PDCD4-205ENST00000467574 KRTAP10-7P60409 375 aaPredicted RBP10.44□□□□□ -0.74
PDCD4-205ENST00000467574 NEBP20929 6669 aa10.43□□□□□ -0.74
PDCD4-205ENST00000467574 A0A0D9SG42 100 aa10.41□□□□□ -0.74
PDCD4-205ENST00000467574 KRTAP10-12P60413 245 aa10.38□□□□□ -0.75
PDCD4-205ENST00000467574 MDN1Q9NU22 5596 aa10.37□□□□□ -0.75
PDCD4-205ENST00000467574 KRTAP4-8A0A0G2JLE6 195 aa10.34□□□□□ -0.75
PDCD4-205ENST00000467574 KRTAP8-1Q8IUC2 63 aa10.34□□□□□ -0.75
PDCD4-205ENST00000467574 KRTAP4-8Q9BYQ9 185 aa10.34□□□□□ -0.75
PDCD4-205ENST00000467574 CAMK2N1Q7Z7J9 78 aa10.33□□□□□ -0.76
PDCD4-205ENST00000467574 SPRR2FQ96RM1 72 aa10.28□□□□□ -0.76
PDCD4-205ENST00000467574 KRTAP12-1P59990 96 aa10.27□□□□□ -0.77
PDCD4-205ENST00000467574 LINC01558Q9Y6Z2 57 aa10.25□□□□□ -0.77
PDCD4-205ENST00000467574 SPINT4Q6UDR6 99 aa10.21□□□□□ -0.77
PDCD4-205ENST00000467574 PRR15LQ9BU68 103 aa10.19□□□□□ -0.78
PDCD4-205ENST00000467574 SMIM26A0A096LP01 95 aa10.18□□□□□ -0.78
PDCD4-205ENST00000467574 A8MU10 97 aa10.17□□□□□ -0.78
PDCD4-205ENST00000467574 SPRR2EP22531 72 aa10.05□□□□□ -0.8
PDCD4-205ENST00000467574 SPRR2BP35325 72 aa10.05□□□□□ -0.8
PDCD4-205ENST00000467574 SPRR2AP35326 72 aa10.05□□□□□ -0.8
PDCD4-205ENST00000467574 LCE1AQ5T7P2 110 aa10.01□□□□□ -0.81
PDCD4-205ENST00000467574 KRTAP20-1Q3LI63 56 aa9.91□□□□□ -0.82
PDCD4-205ENST00000467574 UQCR11O14957 56 aa9.89□□□□□ -0.83
PDCD4-205ENST00000467574 C10orf95Q9H7T3 257 aa9.8□□□□□ -0.84
PDCD4-205ENST00000467574 Q1T7F1 81 aa9.79□□□□□ -0.84
PDCD4-205ENST00000467574 KRTAP19-7Q3SYF9 63 aa9.78□□□□□ -0.84
PDCD4-205ENST00000467574 V9GYY9 64 aa9.78□□□□□ -0.84
PDCD4-205ENST00000467574 KRTAP2-3P0C7H8 128 aa9.73□□□□□ -0.85
PDCD4-205ENST00000467574 PCP4P48539 62 aa9.73□□□□□ -0.85
PDCD4-205ENST00000467574 KRTAP2-4Q9BYR9 128 aa9.73□□□□□ -0.85
PDCD4-205ENST00000467574 PSPHP1O15172 72 aa9.72□□□□□ -0.85
PDCD4-205ENST00000467574 MIR22HGQ0VDD5 57 aa9.71□□□□□ -0.86
PDCD4-205ENST00000467574 SPRR2DP22532 72 aa9.7□□□□□ -0.86
PDCD4-205ENST00000467574 MT1EP04732 61 aa9.67□□□□□ -0.86
PDCD4-205ENST00000467574 TNP1P09430 55 aa9.62□□□□□ -0.87
PDCD4-205ENST00000467574 KRTAP19-5Q3LI72 72 aa9.59□□□□□ -0.87
PDCD4-205ENST00000467574 RPS28P62857 69 aaKnown RBP9.54□□□□□ -0.88
PDCD4-205ENST00000467574 LCE3AQ5TA76 89 aa9.54□□□□□ -0.88
PDCD4-205ENST00000467574 LCE5AQ5TCM9 118 aa9.5□□□□□ -0.89
PDCD4-205ENST00000467574 KRTAP19-3Q7Z4W3 81 aa9.5□□□□□ -0.89
PDCD4-205ENST00000467574 KRTAP2-2Q9BYT5 123 aa9.44□□□□□ -0.9
PDCD4-205ENST00000467574 KRTAP2-1Q9BYU5 128 aa9.44□□□□□ -0.9
PDCD4-205ENST00000467574 LCE3BQ5TA77 95 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms