RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 CEP290O15078 2479 aa-0.76□□□□□ -2.53
SMC4-208ENST00000467468 IGLV5-48A0A075B6I7 105 aa-0.76□□□□□ -2.53
SMC4-208ENST00000467468 DEFB1P60022 68 aa-0.76□□□□□ -2.53
SMC4-208ENST00000467468 DEFB110Q30KQ9 67 aa-0.76□□□□□ -2.53
SMC4-208ENST00000467468 BOD1L1Q8NFC6 3051 aa-0.77□□□□□ -2.53
SMC4-208ENST00000467468 MT1GP13640 62 aa-0.77□□□□□ -2.53
SMC4-208ENST00000467468 A0A087WWC5 75 aa-0.79□□□□□ -2.54
SMC4-208ENST00000467468 MT1FP04733 61 aa-0.8□□□□□ -2.54
SMC4-208ENST00000467468 SFTA3P0C7M3 94 aa-0.8□□□□□ -2.54
SMC4-208ENST00000467468 ADGRG4Q8IZF6 3080 aa-0.8□□□□□ -2.54
SMC4-208ENST00000467468 SMR3BP02814 79 aaPredicted RBP-0.81□□□□□ -2.54
SMC4-208ENST00000467468 ZFHX4Q86UP3 3567 aa-0.82□□□□□ -2.54
SMC4-208ENST00000467468 ATMQ13315 3056 aa-0.82□□□□□ -2.54
SMC4-208ENST00000467468 ABCA6Q8N139 1617 aa-0.82□□□□□ -2.54
SMC4-208ENST00000467468 CSMD2Q7Z408 3487 aa-0.83□□□□□ -2.54
SMC4-208ENST00000467468 DNAH7Q8WXX0 4024 aa-0.83□□□□□ -2.54
SMC4-208ENST00000467468 DNAH1Q9P2D7 4330 aa-0.83□□□□□ -2.54
SMC4-208ENST00000467468 MMP24-AS1A0A0U1RRL7 71 aa-0.83□□□□□ -2.54
SMC4-208ENST00000467468 TIAM1Q13009 1591 aa-0.83□□□□□ -2.54
SMC4-208ENST00000467468 PRUNE2Q8WUY3 3088 aa-0.84□□□□□ -2.54
SMC4-208ENST00000467468 LRBAP50851 2863 aa-0.84□□□□□ -2.54
SMC4-208ENST00000467468 M0R1W7 72 aa-0.84□□□□□ -2.54
SMC4-208ENST00000467468 MT1LQ93083 61 aa-0.84□□□□□ -2.54
SMC4-208ENST00000467468 NOP10Q9NPE3 64 aaKnown RBP-0.84□□□□□ -2.54
SMC4-208ENST00000467468 RELNP78509 3460 aa-0.84□□□□□ -2.54
SMC4-208ENST00000467468 CRYBG3Q68DQ2 2970 aa-0.84□□□□□ -2.54
SMC4-208ENST00000467468 CCDC180Q9P1Z9 1646 aa-0.85□□□□□ -2.55
SMC4-208ENST00000467468 DYNC1H1Q14204 4646 aaKnown RBP-0.85□□□□□ -2.55
SMC4-208ENST00000467468 TRIOO75962 3097 aa-0.85□□□□□ -2.55
SMC4-208ENST00000467468 MT1EP04732 61 aa-0.85□□□□□ -2.55
SMC4-208ENST00000467468 CROCC2H7BZ55 1655 aa-0.85□□□□□ -2.55
SMC4-208ENST00000467468 SERF2P84101 59 aa-0.86□□□□□ -2.55
SMC4-208ENST00000467468 LY75O60449 1722 aa-0.86□□□□□ -2.55
SMC4-208ENST00000467468 CDC42BPAQ5VT25 1732 aa-0.86□□□□□ -2.55
SMC4-208ENST00000467468 DNAH8Q96JB1 4490 aa-0.87□□□□□ -2.55
SMC4-208ENST00000467468 RPS29P62273 56 aaKnown RBP-0.87□□□□□ -2.55
SMC4-208ENST00000467468 NMES1Q9C002 83 aa-0.87□□□□□ -2.55
SMC4-208ENST00000467468 SMG1Q96Q15 3661 aaKnown RBP-0.88□□□□□ -2.55
SMC4-208ENST00000467468 SPENQ96T58 3664 aaKnown RBP-0.88□□□□□ -2.55
SMC4-208ENST00000467468 DNAH5Q8TE73 4624 aa-0.88□□□□□ -2.55
SMC4-208ENST00000467468 CMYA5Q8N3K9 4069 aa-0.89□□□□□ -2.55
SMC4-208ENST00000467468 MGAQ8IWI9 3026 aa-0.89□□□□□ -2.55
SMC4-208ENST00000467468 TNP1P09430 55 aa-0.89□□□□□ -2.55
SMC4-208ENST00000467468 FRYQ5TBA9 3013 aa-0.89□□□□□ -2.55
SMC4-208ENST00000467468 CSMD1Q96PZ7 3565 aa-0.9□□□□□ -2.55
SMC4-208ENST00000467468 FREM2Q5SZK8 3169 aa-0.9□□□□□ -2.55
SMC4-208ENST00000467468 C5orf42Q9H799 3197 aa-0.9□□□□□ -2.55
SMC4-208ENST00000467468 RANBP2P49792 3224 aaKnown RBP-0.9□□□□□ -2.55
SMC4-208ENST00000467468 GLI2P10070 1586 aa-0.9□□□□□ -2.55
SMC4-208ENST00000467468 DEFB4AO15263 64 aa-0.9□□□□□ -2.55
SMC4-208ENST00000467468 KRTAP19-5Q3LI72 72 aa-0.9□□□□□ -2.55
SMC4-208ENST00000467468 LOC400499M0QZD8 3231 aa-0.91□□□□□ -2.55
SMC4-208ENST00000467468 CEP250Q9BV73 2442 aa-0.91□□□□□ -2.56
SMC4-208ENST00000467468 IGIPA6NJ69 53 aa-0.91□□□□□ -2.56
SMC4-208ENST00000467468 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.91□□□□□ -2.56
SMC4-208ENST00000467468 CEP350Q5VT06 3117 aa-0.92□□□□□ -2.56
SMC4-208ENST00000467468 TMEM167BQ9NRX6 74 aa-0.93□□□□□ -2.56
SMC4-208ENST00000467468 EEA1Q15075 1411 aa-0.93□□□□□ -2.56
SMC4-208ENST00000467468 SPEGQ15772 3267 aa-0.93□□□□□ -2.56
SMC4-208ENST00000467468 DCHS1Q96JQ0 3298 aa-0.93□□□□□ -2.56
SMC4-208ENST00000467468 DNAH17Q9UFH2 4485 aa-0.93□□□□□ -2.56
SMC4-208ENST00000467468 TRRAPQ9Y4A5 3859 aa-0.94□□□□□ -2.56
SMC4-208ENST00000467468 CLPSL2Q6UWE3 100 aa-0.94□□□□□ -2.56
SMC4-208ENST00000467468 LINC00308Q8TCZ7 52 aa-0.95□□□□□ -2.56
SMC4-208ENST00000467468 ABCA10Q8WWZ4 1543 aa-0.95□□□□□ -2.56
SMC4-208ENST00000467468 EP400Q96L91 3159 aa-0.96□□□□□ -2.56
SMC4-208ENST00000467468 S100ZQ8WXG8 99 aa-0.96□□□□□ -2.56
SMC4-208ENST00000467468 ALS2Q96Q42 1657 aa-0.97□□□□□ -2.56
SMC4-208ENST00000467468 DMDP11532 3685 aa-0.97□□□□□ -2.56
SMC4-208ENST00000467468 SMIM31A0A1B0GVY4 71 aa-0.97□□□□□ -2.56
SMC4-208ENST00000467468 MAST1Q9Y2H9 1570 aa-0.99□□□□□ -2.57
SMC4-208ENST00000467468 SMIM5Q71RC9 77 aa-1□□□□□ -2.57
SMC4-208ENST00000467468 ABRACLQ9P1F3 81 aa-1□□□□□ -2.57
SMC4-208ENST00000467468 CPS1P31327 1500 aa-1□□□□□ -2.57
SMC4-208ENST00000467468 CFAP54Q96N23 3096 aa-1□□□□□ -2.57
SMC4-208ENST00000467468 WDFY4Q6ZS81 3184 aa-1□□□□□ -2.57
SMC4-208ENST00000467468 M0QY20 66 aa-1.01□□□□□ -2.57
SMC4-208ENST00000467468 FRYLO94915 3013 aa-1.01□□□□□ -2.57
SMC4-208ENST00000467468 UGGT1Q9NYU2 1555 aa-1.01□□□□□ -2.57
SMC4-208ENST00000467468 MUC3AQ02505 3323 aa-1.01□□□□□ -2.57
SMC4-208ENST00000467468 USP34Q70CQ2 3546 aa-1.02□□□□□ -2.57
SMC4-208ENST00000467468 TTTY10Q9BZA0 68 aa-1.02□□□□□ -2.57
SMC4-208ENST00000467468 DNAH10Q8IVF4 4471 aa-1.02□□□□□ -2.57
SMC4-208ENST00000467468 UNC80Q8N2C7 3258 aa-1.03□□□□□ -2.57
SMC4-208ENST00000467468 DEFB136Q30KP8 78 aa-1.03□□□□□ -2.57
SMC4-208ENST00000467468 KAAG1Q9UBP8 84 aa-1.03□□□□□ -2.57
SMC4-208ENST00000467468 H0YGX0 51 aa-1.04□□□□□ -2.58
SMC4-208ENST00000467468 M0QZ58 72 aa-1.04□□□□□ -2.58
SMC4-208ENST00000467468 VCANP13611 3396 aa-1.04□□□□□ -2.58
SMC4-208ENST00000467468 SZT2Q5T011 3432 aa-1.05□□□□□ -2.58
SMC4-208ENST00000467468 SMIM27A0A1W2PRY6 76 aa-1.05□□□□□ -2.58
SMC4-208ENST00000467468 A8MTW9 85 aa-1.05□□□□□ -2.58
SMC4-208ENST00000467468 WDFY3Q8IZQ1 3526 aa-1.06□□□□□ -2.58
SMC4-208ENST00000467468 LINC01546A6NGU7 62 aa-1.06□□□□□ -2.58
SMC4-208ENST00000467468 A0A1B0GUL6 1792 aa-1.06□□□□□ -2.58
SMC4-208ENST00000467468 SPTBN5Q9NRC6 3674 aaKnown RBP-1.07□□□□□ -2.58
SMC4-208ENST00000467468 MKI67P46013 3256 aaKnown RBP-1.07□□□□□ -2.58
SMC4-208ENST00000467468 EFCAB6Q5THR3 1501 aa-1.08□□□□□ -2.58
SMC4-208ENST00000467468 PRXQ9BXM0 1461 aa-1.08□□□□□ -2.58
SMC4-208ENST00000467468 CFAP47Q6ZTR5 3102 aa-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms