RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 SCGB1A1P11684 91 aa11.9□□□□□ -0.5
SMC4-206ENST00000465903 KRTAP19-1Q8IUB9 90 aa11.9□□□□□ -0.5
SMC4-206ENST00000465903 FAM236AA0A1B0GUQ0 79 aa11.85□□□□□ -0.51
SMC4-206ENST00000465903 FAM236BA0A1B0GV22 79 aa11.85□□□□□ -0.51
SMC4-206ENST00000465903 H3BPC8 53 aa11.85□□□□□ -0.51
SMC4-206ENST00000465903 A8MUN3 132 aa11.82□□□□□ -0.52
SMC4-206ENST00000465903 FCGBPQ9Y6R7 5405 aaPredicted RBP11.75□□□□□ -0.53
SMC4-206ENST00000465903 KRTAP19-6Q3LI70 58 aa11.75□□□□□ -0.53
SMC4-206ENST00000465903 NDUFC1O43677 76 aa11.73□□□□□ -0.53
SMC4-206ENST00000465903 SPRR2GQ9BYE4 73 aa11.67□□□□□ -0.54
SMC4-206ENST00000465903 TRAV7A0A075B6U4 112 aa11.66□□□□□ -0.54
SMC4-206ENST00000465903 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.64□□□□□ -0.55
SMC4-206ENST00000465903 SMIM20Q8N5G0 67 aa11.64□□□□□ -0.55
SMC4-206ENST00000465903 DMAC1Q96GE9 116 aa11.61□□□□□ -0.55
SMC4-206ENST00000465903 H0YAA0 97 aa11.59□□□□□ -0.55
SMC4-206ENST00000465903 KRTAP19-8Q3LI54 63 aa11.58□□□□□ -0.56
SMC4-206ENST00000465903 MT1BP07438 61 aa11.57□□□□□ -0.56
SMC4-206ENST00000465903 CRIPTQ9P021 101 aa11.53□□□□□ -0.56
SMC4-206ENST00000465903 Q5VV11 94 aa11.49□□□□□ -0.57
SMC4-206ENST00000465903 ADM2Q7Z4H4 148 aa11.48□□□□□ -0.57
SMC4-206ENST00000465903 SNURFQ9Y675 71 aa11.41□□□□□ -0.58
SMC4-206ENST00000465903 KRTAP9-7A8MTY7 169 aa11.4□□□□□ -0.58
SMC4-206ENST00000465903 ACYP2P14621 99 aa11.37□□□□□ -0.59
SMC4-206ENST00000465903 SERP2Q8N6R1 65 aa11.35□□□□□ -0.59
SMC4-206ENST00000465903 C20orf197Q8N268 126 aa11.3□□□□□ -0.6
SMC4-206ENST00000465903 P0C880 135 aa11.29□□□□□ -0.6
SMC4-206ENST00000465903 MACF1Q9UPN3 7388 aaKnown RBP11.27□□□□□ -0.61
SMC4-206ENST00000465903 A6NN06 94 aa11.26□□□□□ -0.61
SMC4-206ENST00000465903 KRTAP10-5P60370 271 aa11.22□□□□□ -0.61
SMC4-206ENST00000465903 SPANXA2-OT1Q8N9U9 137 aa11.21□□□□□ -0.61
SMC4-206ENST00000465903 SPTSSBQ8NFR3 76 aa11.13□□□□□ -0.63
SMC4-206ENST00000465903 R4GN34 69 aa11.13□□□□□ -0.63
SMC4-206ENST00000465903 CHKB-CPT1BH3BT56 60 aa11.11□□□□□ -0.63
SMC4-206ENST00000465903 SYNE2Q8WXH0 6885 aaKnown RBP11.08□□□□□ -0.63
SMC4-206ENST00000465903 M0QZ58 72 aa11.08□□□□□ -0.64
SMC4-206ENST00000465903 COX7CP15954 63 aa11.08□□□□□ -0.64
SMC4-206ENST00000465903 KRTAP6-3Q3LI67 103 aa10.98□□□□□ -0.65
SMC4-206ENST00000465903 PLAC4Q8WY50 150 aa10.96□□□□□ -0.65
SMC4-206ENST00000465903 CYSTM1Q9H1C7 97 aa10.93□□□□□ -0.66
SMC4-206ENST00000465903 MT1XP80297 61 aa10.89□□□□□ -0.67
SMC4-206ENST00000465903 LINC01554Q52M75 96 aa10.89□□□□□ -0.67
SMC4-206ENST00000465903 H7BZZ5 65 aa10.88□□□□□ -0.67
SMC4-206ENST00000465903 COA5Q86WW8 74 aa10.88□□□□□ -0.67
SMC4-206ENST00000465903 PRO2289Q9P1D8 64 aa10.8□□□□□ -0.68
SMC4-206ENST00000465903 ANAPC13Q9BS18 74 aa10.79□□□□□ -0.68
SMC4-206ENST00000465903 KRTAP13-4Q3LI77 160 aa10.67□□□□□ -0.7
SMC4-206ENST00000465903 CCDC179H3BU77 68 aa10.63□□□□□ -0.71
SMC4-206ENST00000465903 KRTAP5-9P26371 169 aa10.59□□□□□ -0.71
SMC4-206ENST00000465903 KRTAP12-2P59991 146 aa10.55□□□□□ -0.72
SMC4-206ENST00000465903 SEC61GP60059 68 aa10.53□□□□□ -0.72
SMC4-206ENST00000465903 SERP1Q9Y6X1 66 aa10.53□□□□□ -0.72
SMC4-206ENST00000465903 KMT2DO14686 5537 aa10.52□□□□□ -0.72
SMC4-206ENST00000465903 MUC12Q9UKN1 5478 aa10.5□□□□□ -0.73
SMC4-206ENST00000465903 KRTAP10-7P60409 375 aaPredicted RBP10.41□□□□□ -0.74
SMC4-206ENST00000465903 NEBP20929 6669 aa10.41□□□□□ -0.74
SMC4-206ENST00000465903 A0A1B0GU33 70 aa10.39□□□□□ -0.75
SMC4-206ENST00000465903 SPATA8Q6RVD6 105 aa10.38□□□□□ -0.75
SMC4-206ENST00000465903 KRTAP4-8A0A0G2JLE6 195 aa10.37□□□□□ -0.75
SMC4-206ENST00000465903 KRTAP4-8Q9BYQ9 185 aa10.37□□□□□ -0.75
SMC4-206ENST00000465903 KRTAP10-12P60413 245 aa10.35□□□□□ -0.75
SMC4-206ENST00000465903 KRTAP8-1Q8IUC2 63 aa10.35□□□□□ -0.75
SMC4-206ENST00000465903 ATP5EP56381 51 aaPredicted RBP10.33□□□□□ -0.76
SMC4-206ENST00000465903 SPRR2FQ96RM1 72 aa10.31□□□□□ -0.76
SMC4-206ENST00000465903 A0A0D9SG42 100 aa10.3□□□□□ -0.76
SMC4-206ENST00000465903 A0A1B0GU69 56 aa10.29□□□□□ -0.76
SMC4-206ENST00000465903 CAMK2N1Q7Z7J9 78 aa10.26□□□□□ -0.77
SMC4-206ENST00000465903 MDN1Q9NU22 5596 aa10.2□□□□□ -0.78
SMC4-206ENST00000465903 TMEM258P61165 79 aa10.18□□□□□ -0.78
SMC4-206ENST00000465903 KRTAP12-1P59990 96 aa10.16□□□□□ -0.78
SMC4-206ENST00000465903 SPINT4Q6UDR6 99 aa10.15□□□□□ -0.78
SMC4-206ENST00000465903 SPRR2EP22531 72 aa10.09□□□□□ -0.79
SMC4-206ENST00000465903 SPRR2BP35325 72 aa10.09□□□□□ -0.79
SMC4-206ENST00000465903 SPRR2AP35326 72 aa10.09□□□□□ -0.79
SMC4-206ENST00000465903 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
SMC4-206ENST00000465903 SMIM26A0A096LP01 95 aa10.06□□□□□ -0.8
SMC4-206ENST00000465903 A8MU10 97 aa10.05□□□□□ -0.8
SMC4-206ENST00000465903 LCE1AQ5T7P2 110 aa10.04□□□□□ -0.8
SMC4-206ENST00000465903 PRR15LQ9BU68 103 aa10.02□□□□□ -0.81
SMC4-206ENST00000465903 KRTAP20-1Q3LI63 56 aa10.01□□□□□ -0.81
SMC4-206ENST00000465903 KRTAP2-3P0C7H8 128 aa9.84□□□□□ -0.83
SMC4-206ENST00000465903 KRTAP2-4Q9BYR9 128 aa9.84□□□□□ -0.83
SMC4-206ENST00000465903 SPRR2DP22532 72 aa9.75□□□□□ -0.85
SMC4-206ENST00000465903 KRTAP19-7Q3SYF9 63 aa9.75□□□□□ -0.85
SMC4-206ENST00000465903 UQCR11O14957 56 aa9.73□□□□□ -0.85
SMC4-206ENST00000465903 C10orf95Q9H7T3 257 aa9.72□□□□□ -0.85
SMC4-206ENST00000465903 MT1EP04732 61 aa9.63□□□□□ -0.87
SMC4-206ENST00000465903 Q1T7F1 81 aa9.57□□□□□ -0.88
SMC4-206ENST00000465903 V9GYY9 64 aa9.56□□□□□ -0.88
SMC4-206ENST00000465903 TNP1P09430 55 aa9.55□□□□□ -0.88
SMC4-206ENST00000465903 MIR22HGQ0VDD5 57 aa9.55□□□□□ -0.88
SMC4-206ENST00000465903 KRTAP19-5Q3LI72 72 aa9.55□□□□□ -0.88
SMC4-206ENST00000465903 KRTAP2-2Q9BYT5 123 aa9.55□□□□□ -0.88
SMC4-206ENST00000465903 KRTAP2-1Q9BYU5 128 aa9.55□□□□□ -0.88
SMC4-206ENST00000465903 PSPHP1O15172 72 aa9.51□□□□□ -0.89
SMC4-206ENST00000465903 KRTAP19-3Q7Z4W3 81 aa9.49□□□□□ -0.89
SMC4-206ENST00000465903 LCE3BQ5TA77 95 aa9.48□□□□□ -0.89
SMC4-206ENST00000465903 LCE5AQ5TCM9 118 aa9.48□□□□□ -0.89
SMC4-206ENST00000465903 LCE3AQ5TA76 89 aa9.46□□□□□ -0.9
SMC4-206ENST00000465903 PCP4P48539 62 aa9.4□□□□□ -0.9
SMC4-206ENST00000465903 MT1GP13640 62 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms