RNA–Protein interactions for RNA: ENST00000464048.1

DENND4B-204, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-204ENST00000464048 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
DENND4B-204ENST00000464048 RBM12B-AS1Q9P1G2 102 aa6.73□□□□□ -1.33
DENND4B-204ENST00000464048 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
DENND4B-204ENST00000464048 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.34
DENND4B-204ENST00000464048 MT1HP80294 61 aa6.67□□□□□ -1.34
DENND4B-204ENST00000464048 SPTSSBQ8NFR3 76 aa6.65□□□□□ -1.34
DENND4B-204ENST00000464048 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
DENND4B-204ENST00000464048 V9GYY9 64 aa6.64□□□□□ -1.35
DENND4B-204ENST00000464048 Q1T7F1 81 aa6.6□□□□□ -1.35
DENND4B-204ENST00000464048 S4R3F8 94 aa6.58□□□□□ -1.36
DENND4B-204ENST00000464048 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
DENND4B-204ENST00000464048 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
DENND4B-204ENST00000464048 M0R2T5 61 aa6.54□□□□□ -1.36
DENND4B-204ENST00000464048 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
DENND4B-204ENST00000464048 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
DENND4B-204ENST00000464048 LCA10Q71F78 164 aa6.52□□□□□ -1.37
DENND4B-204ENST00000464048 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
DENND4B-204ENST00000464048 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
DENND4B-204ENST00000464048 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
DENND4B-204ENST00000464048 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
DENND4B-204ENST00000464048 A0A1B0GU69 56 aa6.45□□□□□ -1.38
DENND4B-204ENST00000464048 SEC61GP60059 68 aa6.45□□□□□ -1.38
DENND4B-204ENST00000464048 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
DENND4B-204ENST00000464048 PSPHP1O15172 72 aa6.42□□□□□ -1.38
DENND4B-204ENST00000464048 Q5VV11 94 aa6.39□□□□□ -1.39
DENND4B-204ENST00000464048 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
DENND4B-204ENST00000464048 H0YAA0 97 aa6.33□□□□□ -1.4
DENND4B-204ENST00000464048 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
DENND4B-204ENST00000464048 A6NED7 52 aa6.27□□□□□ -1.41
DENND4B-204ENST00000464048 UQCR11O14957 56 aa6.26□□□□□ -1.41
DENND4B-204ENST00000464048 MT2AP02795 61 aa6.26□□□□□ -1.41
DENND4B-204ENST00000464048 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
DENND4B-204ENST00000464048 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
DENND4B-204ENST00000464048 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
DENND4B-204ENST00000464048 A0A1B0GU33 70 aa6.24□□□□□ -1.41
DENND4B-204ENST00000464048 MT1FP04733 61 aa6.19□□□□□ -1.42
DENND4B-204ENST00000464048 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
DENND4B-204ENST00000464048 P0C880 135 aa6.18□□□□□ -1.42
DENND4B-204ENST00000464048 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
DENND4B-204ENST00000464048 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
DENND4B-204ENST00000464048 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
DENND4B-204ENST00000464048 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
DENND4B-204ENST00000464048 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
DENND4B-204ENST00000464048 M0QZ58 72 aa6.13□□□□□ -1.43
DENND4B-204ENST00000464048 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
DENND4B-204ENST00000464048 USH2AO75445 5202 aa6.11□□□□□ -1.43
DENND4B-204ENST00000464048 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
DENND4B-204ENST00000464048 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
DENND4B-204ENST00000464048 R4GN34 69 aa6.06□□□□□ -1.44
DENND4B-204ENST00000464048 KRTAP13-4Q3LI77 160 aa6.05□□□□□ -1.44
DENND4B-204ENST00000464048 LCE2BO14633 110 aa6.03□□□□□ -1.44
DENND4B-204ENST00000464048 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
DENND4B-204ENST00000464048 A8MU10 97 aa6.01□□□□□ -1.45
DENND4B-204ENST00000464048 K7ERS5 55 aa5.96□□□□□ -1.46
DENND4B-204ENST00000464048 A0A0D9SG42 100 aa5.95□□□□□ -1.46
DENND4B-204ENST00000464048 A6NN06 94 aa5.9□□□□□ -1.46
DENND4B-204ENST00000464048 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.46
DENND4B-204ENST00000464048 LINC01554Q52M75 96 aa5.89□□□□□ -1.47
DENND4B-204ENST00000464048 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
DENND4B-204ENST00000464048 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
DENND4B-204ENST00000464048 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
DENND4B-204ENST00000464048 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
DENND4B-204ENST00000464048 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
DENND4B-204ENST00000464048 SPINT4Q6UDR6 99 aa5.84□□□□□ -1.47
DENND4B-204ENST00000464048 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
DENND4B-204ENST00000464048 KRTAP19-8Q3LI54 63 aa5.82□□□□□ -1.48
DENND4B-204ENST00000464048 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
DENND4B-204ENST00000464048 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
DENND4B-204ENST00000464048 MT1BP07438 61 aa5.74□□□□□ -1.49
DENND4B-204ENST00000464048 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
DENND4B-204ENST00000464048 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
DENND4B-204ENST00000464048 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
DENND4B-204ENST00000464048 ROMO1P60602 79 aa5.66□□□□□ -1.5
DENND4B-204ENST00000464048 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
DENND4B-204ENST00000464048 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
DENND4B-204ENST00000464048 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
DENND4B-204ENST00000464048 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
DENND4B-204ENST00000464048 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
DENND4B-204ENST00000464048 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
DENND4B-204ENST00000464048 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
DENND4B-204ENST00000464048 MT1XP80297 61 aa5.44□□□□□ -1.54
DENND4B-204ENST00000464048 TNP1P09430 55 aa5.43□□□□□ -1.54
DENND4B-204ENST00000464048 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
DENND4B-204ENST00000464048 NEBP20929 6669 aa5.34□□□□□ -1.55
DENND4B-204ENST00000464048 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
DENND4B-204ENST00000464048 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
DENND4B-204ENST00000464048 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
DENND4B-204ENST00000464048 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
DENND4B-204ENST00000464048 KMT2DO14686 5537 aa5.24□□□□□ -1.57
DENND4B-204ENST00000464048 H3BS24 57 aa5.21□□□□□ -1.58
DENND4B-204ENST00000464048 KRTAP10-12P60413 245 aa5.21□□□□□ -1.58
DENND4B-204ENST00000464048 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
DENND4B-204ENST00000464048 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
DENND4B-204ENST00000464048 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
DENND4B-204ENST00000464048 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
DENND4B-204ENST00000464048 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
DENND4B-204ENST00000464048 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
DENND4B-204ENST00000464048 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
DENND4B-204ENST00000464048 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
DENND4B-204ENST00000464048 SPRR2EP22531 72 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms