RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 DMBT1Q9UGM3 2413 aaPredicted RBP3.66□□□□□ -1.82
CDKL5-203ENST00000463994 KMT2CQ8NEZ4 4911 aaKnown RBP3.66□□□□□ -1.82
CDKL5-203ENST00000463994 A0A1B0GVY2 172 aa3.66□□□□□ -1.82
CDKL5-203ENST00000463994 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
CDKL5-203ENST00000463994 DNAH8Q96JB1 4490 aa3.64□□□□□ -1.83
CDKL5-203ENST00000463994 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
CDKL5-203ENST00000463994 DNAH17Q9UFH2 4485 aa3.62□□□□□ -1.83
CDKL5-203ENST00000463994 STARD9Q9P2P6 4700 aa3.61□□□□□ -1.83
CDKL5-203ENST00000463994 VPS13DQ5THJ4 4388 aa3.61□□□□□ -1.83
CDKL5-203ENST00000463994 HERC2O95714 4834 aa3.6□□□□□ -1.83
CDKL5-203ENST00000463994 KRTAP12-1P59990 96 aa3.59□□□□□ -1.83
CDKL5-203ENST00000463994 STAB2Q8WWQ8 2551 aa3.59□□□□□ -1.83
CDKL5-203ENST00000463994 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
CDKL5-203ENST00000463994 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
CDKL5-203ENST00000463994 DNAH11Q96DT5 4516 aa3.56□□□□□ -1.84
CDKL5-203ENST00000463994 FAT2Q9NYQ8 4349 aa3.54□□□□□ -1.84
CDKL5-203ENST00000463994 KRTAP17-1Q9BYP8 105 aa3.54□□□□□ -1.84
CDKL5-203ENST00000463994 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
CDKL5-203ENST00000463994 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
CDKL5-203ENST00000463994 HECTD4Q9Y4D8 3996 aa3.52□□□□□ -1.85
CDKL5-203ENST00000463994 HYDINQ4G0P3 5121 aa3.52□□□□□ -1.85
CDKL5-203ENST00000463994 DNAH2Q9P225 4427 aa3.51□□□□□ -1.85
CDKL5-203ENST00000463994 RPS29P62273 56 aaKnown RBP3.51□□□□□ -1.85
CDKL5-203ENST00000463994 R4GN34 69 aa3.49□□□□□ -1.85
CDKL5-203ENST00000463994 KRTAP10-2P60368 255 aa3.48□□□□□ -1.85
CDKL5-203ENST00000463994 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
CDKL5-203ENST00000463994 M0QZ58 72 aa3.46□□□□□ -1.86
CDKL5-203ENST00000463994 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
CDKL5-203ENST00000463994 INE1O15225 51 aa3.45□□□□□ -1.86
CDKL5-203ENST00000463994 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
CDKL5-203ENST00000463994 RYR1P21817 5038 aa3.45□□□□□ -1.86
CDKL5-203ENST00000463994 KMT2AQ03164 3969 aa3.44□□□□□ -1.86
CDKL5-203ENST00000463994 C9orf92A6NGG3 77 aa3.44□□□□□ -1.86
CDKL5-203ENST00000463994 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
CDKL5-203ENST00000463994 Q5VSD8 79 aa3.41□□□□□ -1.86
CDKL5-203ENST00000463994 PKD1P98161 4303 aa3.41□□□□□ -1.86
CDKL5-203ENST00000463994 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
CDKL5-203ENST00000463994 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
CDKL5-203ENST00000463994 PKHD1P08F94 4074 aa3.4□□□□□ -1.87
CDKL5-203ENST00000463994 KRTAP4-5Q9BYR2 181 aa3.39□□□□□ -1.87
CDKL5-203ENST00000463994 HSPG2P98160 4391 aa3.38□□□□□ -1.87
CDKL5-203ENST00000463994 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
CDKL5-203ENST00000463994 APOBP04114 4563 aaKnown RBP3.37□□□□□ -1.87
CDKL5-203ENST00000463994 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
CDKL5-203ENST00000463994 KIAA1109Q2LD37 5005 aa3.36□□□□□ -1.87
CDKL5-203ENST00000463994 LRP1BQ9NZR2 4599 aa3.35□□□□□ -1.87
CDKL5-203ENST00000463994 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
CDKL5-203ENST00000463994 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
CDKL5-203ENST00000463994 DNAH5Q8TE73 4624 aa3.33□□□□□ -1.88
CDKL5-203ENST00000463994 KRTAP9-6A0A140TA67 174 aa3.33□□□□□ -1.88
CDKL5-203ENST00000463994 KRTAP10-4P60372 401 aaPredicted RBP3.31□□□□□ -1.88
CDKL5-203ENST00000463994 ABCA13Q86UQ4 5058 aa3.3□□□□□ -1.88
CDKL5-203ENST00000463994 MYCBP2O75592 4640 aa3.3□□□□□ -1.88
CDKL5-203ENST00000463994 KRTAP4-8A0A0G2JLE6 195 aa3.29□□□□□ -1.88
CDKL5-203ENST00000463994 SMR3BP02814 79 aaPredicted RBP3.27□□□□□ -1.89
CDKL5-203ENST00000463994 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
CDKL5-203ENST00000463994 KRTAP9-8Q9BYQ0 159 aa3.23□□□□□ -1.89
CDKL5-203ENST00000463994 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
CDKL5-203ENST00000463994 MT1HL1P0DM35 61 aa3.22□□□□□ -1.89
CDKL5-203ENST00000463994 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
CDKL5-203ENST00000463994 FAT1Q14517 4588 aa3.2□□□□□ -1.9
CDKL5-203ENST00000463994 FAT3Q8TDW7 4589 aa3.18□□□□□ -1.9
CDKL5-203ENST00000463994 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
CDKL5-203ENST00000463994 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
CDKL5-203ENST00000463994 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
CDKL5-203ENST00000463994 TNXBP22105 4242 aa3.11□□□□□ -1.91
CDKL5-203ENST00000463994 TNP1P09430 55 aa3.1□□□□□ -1.91
CDKL5-203ENST00000463994 HERC1Q15751 4861 aa3.1□□□□□ -1.91
CDKL5-203ENST00000463994 LRP1Q07954 4544 aaKnown RBP3.1□□□□□ -1.91
CDKL5-203ENST00000463994 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
CDKL5-203ENST00000463994 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
CDKL5-203ENST00000463994 LCE5AQ5TCM9 118 aa3.02□□□□□ -1.93
CDKL5-203ENST00000463994 KRTAP4-9Q9BYQ8 210 aa3.02□□□□□ -1.93
CDKL5-203ENST00000463994 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
CDKL5-203ENST00000463994 MUC17Q685J3 4493 aa3□□□□□ -1.93
CDKL5-203ENST00000463994 RNF213Q63HN8 5207 aa2.91□□□□□ -1.94
CDKL5-203ENST00000463994 KRTAP10-10P60014 251 aa2.89□□□□□ -1.95
CDKL5-203ENST00000463994 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
CDKL5-203ENST00000463994 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
CDKL5-203ENST00000463994 LRP2P98164 4655 aa2.84□□□□□ -1.96
CDKL5-203ENST00000463994 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
CDKL5-203ENST00000463994 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
CDKL5-203ENST00000463994 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CDKL5-203ENST00000463994 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
CDKL5-203ENST00000463994 LPAP08519 4548 aa2.81□□□□□ -1.96
CDKL5-203ENST00000463994 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
CDKL5-203ENST00000463994 KRTAP4-1Q9BYQ7 146 aa2.8□□□□□ -1.96
CDKL5-203ENST00000463994 FLGP20930 4061 aaPredicted RBP2.8□□□□□ -1.96
CDKL5-203ENST00000463994 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
CDKL5-203ENST00000463994 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
CDKL5-203ENST00000463994 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
CDKL5-203ENST00000463994 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
CDKL5-203ENST00000463994 KRTAP19-4Q3LI73 84 aa2.75□□□□□ -1.97
CDKL5-203ENST00000463994 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
CDKL5-203ENST00000463994 MT1HP80294 61 aa2.73□□□□□ -1.97
CDKL5-203ENST00000463994 KRTAP19-1Q8IUB9 90 aa2.73□□□□□ -1.97
CDKL5-203ENST00000463994 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
CDKL5-203ENST00000463994 SPRR2GQ9BYE4 73 aa2.66□□□□□ -1.98
CDKL5-203ENST00000463994 M0R2T5 61 aa2.65□□□□□ -1.98
CDKL5-203ENST00000463994 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms