RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 SERP2Q8N6R1 65 aa10.65□□□□□ -0.7
PDLIM7-206ENST00000463411 H1FX-AS1Q4G0G2 97 aa10.61□□□□□ -0.71
PDLIM7-206ENST00000463411 FCGBPQ9Y6R7 5405 aaPredicted RBP10.59□□□□□ -0.71
PDLIM7-206ENST00000463411 COX7CP15954 63 aa10.51□□□□□ -0.73
PDLIM7-206ENST00000463411 C4orf26Q17RF5 130 aa10.51□□□□□ -0.73
PDLIM7-206ENST00000463411 KLKP1Q107X0 134 aa10.49□□□□□ -0.73
PDLIM7-206ENST00000463411 ANAPC13Q9BS18 74 aa10.46□□□□□ -0.73
PDLIM7-206ENST00000463411 KRTAP19-6Q3LI70 58 aa10.45□□□□□ -0.74
PDLIM7-206ENST00000463411 C20orf197Q8N268 126 aa10.45□□□□□ -0.74
PDLIM7-206ENST00000463411 SNURFQ9Y675 71 aa10.41□□□□□ -0.74
PDLIM7-206ENST00000463411 KRTAP3-1Q9BYR8 98 aa10.4□□□□□ -0.74
PDLIM7-206ENST00000463411 MACF1Q9UPN3 7388 aaKnown RBP10.37□□□□□ -0.75
PDLIM7-206ENST00000463411 A8MUN3 132 aa10.35□□□□□ -0.75
PDLIM7-206ENST00000463411 NDUFC1O43677 76 aa10.28□□□□□ -0.76
PDLIM7-206ENST00000463411 SPANXA2-OT1Q8N9U9 137 aa10.27□□□□□ -0.77
PDLIM7-206ENST00000463411 DMAC1Q96GE9 116 aa10.27□□□□□ -0.77
PDLIM7-206ENST00000463411 SYNE2Q8WXH0 6885 aaKnown RBP10.26□□□□□ -0.77
PDLIM7-206ENST00000463411 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
PDLIM7-206ENST00000463411 S4R3F8 94 aa10.22□□□□□ -0.77
PDLIM7-206ENST00000463411 H7BZZ5 65 aa10.2□□□□□ -0.78
PDLIM7-206ENST00000463411 CYSTM1Q9H1C7 97 aa10.19□□□□□ -0.78
PDLIM7-206ENST00000463411 CSAG1Q6PB30 78 aa10.16□□□□□ -0.78
PDLIM7-206ENST00000463411 ACYP2P14621 99 aa10.13□□□□□ -0.79
PDLIM7-206ENST00000463411 LCA10Q71F78 164 aa10.13□□□□□ -0.79
PDLIM7-206ENST00000463411 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
PDLIM7-206ENST00000463411 KRTAP6-3Q3LI67 103 aa10.03□□□□□ -0.8
PDLIM7-206ENST00000463411 Q5VV11 94 aa10.02□□□□□ -0.81
PDLIM7-206ENST00000463411 SPRR2GQ9BYE4 73 aa9.99□□□□□ -0.81
PDLIM7-206ENST00000463411 A6NN06 94 aa9.97□□□□□ -0.81
PDLIM7-206ENST00000463411 ATP5EP56381 51 aaPredicted RBP9.97□□□□□ -0.81
PDLIM7-206ENST00000463411 MT1BP07438 61 aa9.95□□□□□ -0.82
PDLIM7-206ENST00000463411 TMEM258P61165 79 aa9.94□□□□□ -0.82
PDLIM7-206ENST00000463411 KRTAP19-8Q3LI54 63 aa9.93□□□□□ -0.82
PDLIM7-206ENST00000463411 PCP4P48539 62 aa9.91□□□□□ -0.82
PDLIM7-206ENST00000463411 CHKB-CPT1BH3BT56 60 aa9.9□□□□□ -0.82
PDLIM7-206ENST00000463411 COA5Q86WW8 74 aa9.89□□□□□ -0.83
PDLIM7-206ENST00000463411 SPTSSBQ8NFR3 76 aa9.89□□□□□ -0.83
PDLIM7-206ENST00000463411 H0YAA0 97 aa9.84□□□□□ -0.83
PDLIM7-206ENST00000463411 CRIPTQ9P021 101 aa9.83□□□□□ -0.84
PDLIM7-206ENST00000463411 KRTAP10-5P60370 271 aa9.79□□□□□ -0.84
PDLIM7-206ENST00000463411 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
PDLIM7-206ENST00000463411 NEBP20929 6669 aa9.66□□□□□ -0.86
PDLIM7-206ENST00000463411 SERP1Q9Y6X1 66 aa9.62□□□□□ -0.87
PDLIM7-206ENST00000463411 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
PDLIM7-206ENST00000463411 MUC12Q9UKN1 5478 aa9.54□□□□□ -0.88
PDLIM7-206ENST00000463411 P0C880 135 aa9.53□□□□□ -0.88
PDLIM7-206ENST00000463411 KRTAP5-9P26371 169 aa9.5□□□□□ -0.89
PDLIM7-206ENST00000463411 SEC61GP60059 68 aa9.45□□□□□ -0.9
PDLIM7-206ENST00000463411 PRO2289Q9P1D8 64 aa9.45□□□□□ -0.9
PDLIM7-206ENST00000463411 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
PDLIM7-206ENST00000463411 KRTAP20-1Q3LI63 56 aa9.39□□□□□ -0.91
PDLIM7-206ENST00000463411 PLAC4Q8WY50 150 aa9.39□□□□□ -0.91
PDLIM7-206ENST00000463411 LINC01558Q9Y6Z2 57 aa9.39□□□□□ -0.91
PDLIM7-206ENST00000463411 R4GN34 69 aa9.38□□□□□ -0.91
PDLIM7-206ENST00000463411 A0A1B0GU69 56 aa9.36□□□□□ -0.91
PDLIM7-206ENST00000463411 M0QZ58 72 aa9.33□□□□□ -0.92
PDLIM7-206ENST00000463411 KMT2DO14686 5537 aa9.32□□□□□ -0.92
PDLIM7-206ENST00000463411 MT1XP80297 61 aa9.3□□□□□ -0.92
PDLIM7-206ENST00000463411 PRR15LQ9BU68 103 aa9.3□□□□□ -0.92
PDLIM7-206ENST00000463411 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
PDLIM7-206ENST00000463411 V9GYY9 64 aa9.27□□□□□ -0.93
PDLIM7-206ENST00000463411 MDN1Q9NU22 5596 aa9.25□□□□□ -0.93
PDLIM7-206ENST00000463411 Q1T7F1 81 aa9.24□□□□□ -0.93
PDLIM7-206ENST00000463411 A0A1B0GU33 70 aa9.23□□□□□ -0.93
PDLIM7-206ENST00000463411 SPRR2FQ96RM1 72 aa9.22□□□□□ -0.93
PDLIM7-206ENST00000463411 KRTAP13-4Q3LI77 160 aa9.18□□□□□ -0.94
PDLIM7-206ENST00000463411 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
PDLIM7-206ENST00000463411 KRTAP8-1Q8IUC2 63 aa9.16□□□□□ -0.94
PDLIM7-206ENST00000463411 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
PDLIM7-206ENST00000463411 SPRR2EP22531 72 aa9.13□□□□□ -0.95
PDLIM7-206ENST00000463411 SPRR2BP35325 72 aa9.13□□□□□ -0.95
PDLIM7-206ENST00000463411 SPRR2AP35326 72 aa9.13□□□□□ -0.95
PDLIM7-206ENST00000463411 KRTAP2-3P0C7H8 128 aa9.09□□□□□ -0.95
PDLIM7-206ENST00000463411 KRTAP2-4Q9BYR9 128 aa9.09□□□□□ -0.95
PDLIM7-206ENST00000463411 SPATA8Q6RVD6 105 aa9.06□□□□□ -0.96
PDLIM7-206ENST00000463411 UQCR11O14957 56 aa9.01□□□□□ -0.97
PDLIM7-206ENST00000463411 PSPHP1O15172 72 aa9.01□□□□□ -0.97
PDLIM7-206ENST00000463411 LCE1AQ5T7P2 110 aa8.95□□□□□ -0.98
PDLIM7-206ENST00000463411 KRTAP4-8A0A0G2JLE6 195 aa8.93□□□□□ -0.98
PDLIM7-206ENST00000463411 KRTAP4-8Q9BYQ9 185 aa8.93□□□□□ -0.98
PDLIM7-206ENST00000463411 A0A0D9SG42 100 aa8.92□□□□□ -0.98
PDLIM7-206ENST00000463411 KRTAP10-7P60409 375 aaPredicted RBP8.87□□□□□ -0.99
PDLIM7-206ENST00000463411 A8MU10 97 aa8.85□□□□□ -0.99
PDLIM7-206ENST00000463411 KRTAP10-12P60413 245 aa8.85□□□□□ -0.99
PDLIM7-206ENST00000463411 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
PDLIM7-206ENST00000463411 SPRR2DP22532 72 aa8.83□□□□□ -1
PDLIM7-206ENST00000463411 KRTAP12-1P59990 96 aa8.83□□□□□ -1
PDLIM7-206ENST00000463411 KRTAP2-2Q9BYT5 123 aa8.79□□□□□ -1
PDLIM7-206ENST00000463411 KRTAP2-1Q9BYU5 128 aa8.79□□□□□ -1
PDLIM7-206ENST00000463411 A6NED7 52 aa8.77□□□□□ -1.01
PDLIM7-206ENST00000463411 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
PDLIM7-206ENST00000463411 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
PDLIM7-206ENST00000463411 LCE3BQ5TA77 95 aa8.59□□□□□ -1.03
PDLIM7-206ENST00000463411 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
PDLIM7-206ENST00000463411 K7ERS5 55 aa8.56□□□□□ -1.04
PDLIM7-206ENST00000463411 C10orf95Q9H7T3 257 aa8.38□□□□□ -1.07
PDLIM7-206ENST00000463411 KRTAP19-7Q3SYF9 63 aa8.31□□□□□ -1.08
PDLIM7-206ENST00000463411 BRK1Q8WUW1 75 aa8.28□□□□□ -1.08
PDLIM7-206ENST00000463411 MT1EP04732 61 aa8.27□□□□□ -1.09
PDLIM7-206ENST00000463411 LCE5AQ5TCM9 118 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms