RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
CDC42BPA-210ENST00000462553 FAM240AA0A1B0GVK7 77 aa3.78□□□□□ -1.8
CDC42BPA-210ENST00000462553 A0A1B0GV90 55 aa3.77□□□□□ -1.81
CDC42BPA-210ENST00000462553 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
CDC42BPA-210ENST00000462553 ACYP1P07311 99 aa3.75□□□□□ -1.81
CDC42BPA-210ENST00000462553 C4orf26Q17RF5 130 aa3.73□□□□□ -1.81
CDC42BPA-210ENST00000462553 ATP5EP2Q5VTU8 51 aa3.73□□□□□ -1.81
CDC42BPA-210ENST00000462553 TP53AIP1Q9HCN2 124 aa3.73□□□□□ -1.81
CDC42BPA-210ENST00000462553 A0A087WVE0 104 aa3.69□□□□□ -1.82
CDC42BPA-210ENST00000462553 LINC00643Q86TS7 51 aa3.69□□□□□ -1.82
CDC42BPA-210ENST00000462553 TRAV22A0A0B4J277 110 aa3.68□□□□□ -1.82
CDC42BPA-210ENST00000462553 HIST1H4AP62805 103 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-210ENST00000462553 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-210ENST00000462553 C1orf64Q8NEQ6 169 aa3.67□□□□□ -1.82
CDC42BPA-210ENST00000462553 CYP4F30PQ9H0H9 118 aa3.67□□□□□ -1.82
CDC42BPA-210ENST00000462553 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
CDC42BPA-210ENST00000462553 S4R3F8 94 aa3.65□□□□□ -1.83
CDC42BPA-210ENST00000462553 LOC101927531A0A1B0GV80 90 aa3.64□□□□□ -1.83
CDC42BPA-210ENST00000462553 UQCRQO14949 82 aa3.64□□□□□ -1.83
CDC42BPA-210ENST00000462553 C5orf47Q569G3 176 aa3.64□□□□□ -1.83
CDC42BPA-210ENST00000462553 LCA10Q71F78 164 aa3.64□□□□□ -1.83
CDC42BPA-210ENST00000462553 KMT2DO14686 5537 aa3.64□□□□□ -1.83
CDC42BPA-210ENST00000462553 H0Y9P7 68 aa3.63□□□□□ -1.83
CDC42BPA-210ENST00000462553 OCR1Q9BZK8 76 aa3.62□□□□□ -1.83
CDC42BPA-210ENST00000462553 MT1BP07438 61 aa3.61□□□□□ -1.83
CDC42BPA-210ENST00000462553 ATOX1O00244 68 aa3.6□□□□□ -1.83
CDC42BPA-210ENST00000462553 J3QR89 54 aa3.59□□□□□ -1.83
CDC42BPA-210ENST00000462553 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
CDC42BPA-210ENST00000462553 A6NN06 94 aa3.58□□□□□ -1.84
CDC42BPA-210ENST00000462553 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-210ENST00000462553 KLKP1Q107X0 134 aa3.58□□□□□ -1.84
CDC42BPA-210ENST00000462553 CSAG1Q6PB30 78 aa3.58□□□□□ -1.84
CDC42BPA-210ENST00000462553 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
CDC42BPA-210ENST00000462553 LINC00208Q96KT6 92 aa3.57□□□□□ -1.84
CDC42BPA-210ENST00000462553 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
CDC42BPA-210ENST00000462553 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
CDC42BPA-210ENST00000462553 FAM236AA0A1B0GUQ0 79 aa3.54□□□□□ -1.84
CDC42BPA-210ENST00000462553 FAM236BA0A1B0GV22 79 aa3.54□□□□□ -1.84
CDC42BPA-210ENST00000462553 Q5VV11 94 aa3.54□□□□□ -1.84
CDC42BPA-210ENST00000462553 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
CDC42BPA-210ENST00000462553 MT-ATP8P03928 68 aa3.53□□□□□ -1.84
CDC42BPA-210ENST00000462553 MP68P56378 58 aa3.53□□□□□ -1.84
CDC42BPA-210ENST00000462553 A8MUN3 132 aa3.52□□□□□ -1.85
CDC42BPA-210ENST00000462553 H3BPC8 53 aa3.51□□□□□ -1.85
CDC42BPA-210ENST00000462553 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CDC42BPA-210ENST00000462553 IMUPQ9GZP8 106 aa3.51□□□□□ -1.85
CDC42BPA-210ENST00000462553 K7ERU9 68 aa3.5□□□□□ -1.85
CDC42BPA-210ENST00000462553 H0YAA0 97 aa3.48□□□□□ -1.85
CDC42BPA-210ENST00000462553 NDUFC1O43677 76 aa3.48□□□□□ -1.85
CDC42BPA-210ENST00000462553 SCGB1A1P11684 91 aa3.48□□□□□ -1.85
CDC42BPA-210ENST00000462553 DMAC1Q96GE9 116 aa3.47□□□□□ -1.85
CDC42BPA-210ENST00000462553 TRAV7A0A075B6U4 112 aa3.45□□□□□ -1.86
CDC42BPA-210ENST00000462553 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
CDC42BPA-210ENST00000462553 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
CDC42BPA-210ENST00000462553 ADM2Q7Z4H4 148 aa3.44□□□□□ -1.86
CDC42BPA-210ENST00000462553 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
CDC42BPA-210ENST00000462553 CRIPTQ9P021 101 aa3.44□□□□□ -1.86
CDC42BPA-210ENST00000462553 SMIM20Q8N5G0 67 aa3.42□□□□□ -1.86
CDC42BPA-210ENST00000462553 P0C880 135 aa3.4□□□□□ -1.87
CDC42BPA-210ENST00000462553 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
CDC42BPA-210ENST00000462553 SPRR2EP22531 72 aa3.38□□□□□ -1.87
CDC42BPA-210ENST00000462553 SPRR2BP35325 72 aa3.38□□□□□ -1.87
CDC42BPA-210ENST00000462553 SPRR2AP35326 72 aa3.38□□□□□ -1.87
CDC42BPA-210ENST00000462553 SNURFQ9Y675 71 aa3.38□□□□□ -1.87
CDC42BPA-210ENST00000462553 ACYP2P14621 99 aa3.35□□□□□ -1.87
CDC42BPA-210ENST00000462553 MT1XP80297 61 aa3.34□□□□□ -1.87
CDC42BPA-210ENST00000462553 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
CDC42BPA-210ENST00000462553 C20orf197Q8N268 126 aa3.34□□□□□ -1.87
CDC42BPA-210ENST00000462553 SERP2Q8N6R1 65 aa3.34□□□□□ -1.87
CDC42BPA-210ENST00000462553 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
CDC42BPA-210ENST00000462553 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
CDC42BPA-210ENST00000462553 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
CDC42BPA-210ENST00000462553 R4GN34 69 aa3.32□□□□□ -1.88
CDC42BPA-210ENST00000462553 M0QZ58 72 aa3.31□□□□□ -1.88
CDC42BPA-210ENST00000462553 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
CDC42BPA-210ENST00000462553 CHKB-CPT1BH3BT56 60 aa3.27□□□□□ -1.89
CDC42BPA-210ENST00000462553 SPRR2DP22532 72 aa3.27□□□□□ -1.89
CDC42BPA-210ENST00000462553 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
CDC42BPA-210ENST00000462553 SPTSSBQ8NFR3 76 aa3.27□□□□□ -1.89
CDC42BPA-210ENST00000462553 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
CDC42BPA-210ENST00000462553 COX7CP15954 63 aa3.26□□□□□ -1.89
CDC42BPA-210ENST00000462553 CYSTM1Q9H1C7 97 aa3.26□□□□□ -1.89
CDC42BPA-210ENST00000462553 PLAC4Q8WY50 150 aa3.25□□□□□ -1.89
CDC42BPA-210ENST00000462553 LINC01554Q52M75 96 aa3.24□□□□□ -1.89
CDC42BPA-210ENST00000462553 COA5Q86WW8 74 aa3.24□□□□□ -1.89
CDC42BPA-210ENST00000462553 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
CDC42BPA-210ENST00000462553 H7BZZ5 65 aa3.23□□□□□ -1.89
CDC42BPA-210ENST00000462553 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
CDC42BPA-210ENST00000462553 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
CDC42BPA-210ENST00000462553 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
CDC42BPA-210ENST00000462553 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
CDC42BPA-210ENST00000462553 ANAPC13Q9BS18 74 aa3.15□□□□□ -1.91
CDC42BPA-210ENST00000462553 CCDC179H3BU77 68 aa3.13□□□□□ -1.91
CDC42BPA-210ENST00000462553 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
CDC42BPA-210ENST00000462553 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
CDC42BPA-210ENST00000462553 SEC61GP60059 68 aa3.08□□□□□ -1.92
CDC42BPA-210ENST00000462553 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
CDC42BPA-210ENST00000462553 A0A0D9SG42 100 aa3.07□□□□□ -1.92
CDC42BPA-210ENST00000462553 A0A1B0GU33 70 aa3.07□□□□□ -1.92
CDC42BPA-210ENST00000462553 ATP5EP56381 51 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms