RNA–Protein interactions for RNA: ENST00000462392.5

IMP4-210, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 1,793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-210ENST00000462392 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
IMP4-210ENST00000462392 S4R3F8 94 aa10.22□□□□□ -0.77
IMP4-210ENST00000462392 PSPHP1O15172 72 aa10.21□□□□□ -0.77
IMP4-210ENST00000462392 LCA10Q71F78 164 aa10.21□□□□□ -0.77
IMP4-210ENST00000462392 PRR15LQ9BU68 103 aa10.19□□□□□ -0.78
IMP4-210ENST00000462392 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
IMP4-210ENST00000462392 MUC2Q02817 5179 aa10.13□□□□□ -0.79
IMP4-210ENST00000462392 KRTAP19-2Q3LHN2 52 aa10.11□□□□□ -0.79
IMP4-210ENST00000462392 Q5VV11 94 aa10.11□□□□□ -0.79
IMP4-210ENST00000462392 A0A1B0GU69 56 aa10.09□□□□□ -0.79
IMP4-210ENST00000462392 UBR4Q5T4S7 5183 aa10.03□□□□□ -0.8
IMP4-210ENST00000462392 SEC61GP60059 68 aa10.01□□□□□ -0.81
IMP4-210ENST00000462392 CSAG1Q6PB30 78 aa9.98□□□□□ -0.81
IMP4-210ENST00000462392 RNF213Q63HN8 5207 aa9.91□□□□□ -0.82
IMP4-210ENST00000462392 A6NED7 52 aa9.88□□□□□ -0.83
IMP4-210ENST00000462392 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
IMP4-210ENST00000462392 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
IMP4-210ENST00000462392 BRK1Q8WUW1 75 aa9.83□□□□□ -0.84
IMP4-210ENST00000462392 KRTAP10-6P60371 365 aaPredicted RBP9.82□□□□□ -0.84
IMP4-210ENST00000462392 ADM2Q7Z4H4 148 aa9.79□□□□□ -0.84
IMP4-210ENST00000462392 FLGP20930 4061 aaPredicted RBP9.79□□□□□ -0.84
IMP4-210ENST00000462392 UQCR11O14957 56 aa9.78□□□□□ -0.84
IMP4-210ENST00000462392 A0A1B0GU33 70 aa9.77□□□□□ -0.85
IMP4-210ENST00000462392 P0C880 135 aa9.75□□□□□ -0.85
IMP4-210ENST00000462392 H0YAA0 97 aa9.75□□□□□ -0.85
IMP4-210ENST00000462392 A8MU10 97 aa9.72□□□□□ -0.85
IMP4-210ENST00000462392 FAT4Q6V0I7 4981 aa9.71□□□□□ -0.85
IMP4-210ENST00000462392 CDC42SE1Q9NRR8 79 aa9.7□□□□□ -0.86
IMP4-210ENST00000462392 MIR22HGQ0VDD5 57 aa9.68□□□□□ -0.86
IMP4-210ENST00000462392 SPATA8Q6RVD6 105 aa9.67□□□□□ -0.86
IMP4-210ENST00000462392 MT1HP80294 61 aa9.66□□□□□ -0.86
IMP4-210ENST00000462392 PRO0628Q9UI54 55 aa9.6□□□□□ -0.87
IMP4-210ENST00000462392 M0R2T5 61 aa9.59□□□□□ -0.87
IMP4-210ENST00000462392 KRTAP13-4Q3LI77 160 aa9.58□□□□□ -0.88
IMP4-210ENST00000462392 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
IMP4-210ENST00000462392 M0QZ58 72 aa9.47□□□□□ -0.89
IMP4-210ENST00000462392 R4GN34 69 aa9.43□□□□□ -0.9
IMP4-210ENST00000462392 A0A0D9SG42 100 aa9.41□□□□□ -0.9
IMP4-210ENST00000462392 KRTAP9-8Q9BYQ0 159 aa9.31□□□□□ -0.92
IMP4-210ENST00000462392 MT2AP02795 61 aa9.29□□□□□ -0.92
IMP4-210ENST00000462392 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
IMP4-210ENST00000462392 LINC01554Q52M75 96 aa9.29□□□□□ -0.92
IMP4-210ENST00000462392 PMAIP1Q13794 54 aa9.28□□□□□ -0.92
IMP4-210ENST00000462392 MT1FP04733 61 aa9.24□□□□□ -0.93
IMP4-210ENST00000462392 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
IMP4-210ENST00000462392 KRTAP10-10P60014 251 aa9.22□□□□□ -0.93
IMP4-210ENST00000462392 A6NN06 94 aa9.22□□□□□ -0.93
IMP4-210ENST00000462392 K7ERS5 55 aa9.22□□□□□ -0.93
IMP4-210ENST00000462392 KRTAP12-1P59990 96 aa9.2□□□□□ -0.94
IMP4-210ENST00000462392 KRTAP12-2P59991 146 aa9.19□□□□□ -0.94
IMP4-210ENST00000462392 SPINT4Q6UDR6 99 aa9.17□□□□□ -0.94
IMP4-210ENST00000462392 SPRR2GQ9BYE4 73 aa9.12□□□□□ -0.95
IMP4-210ENST00000462392 KRTAP19-1Q8IUB9 90 aa9.11□□□□□ -0.95
IMP4-210ENST00000462392 KRTAP9-3Q9BYQ3 159 aa8.97□□□□□ -0.97
IMP4-210ENST00000462392 KTN1-AS1Q86SY8 53 aa8.89□□□□□ -0.99
IMP4-210ENST00000462392 SVIPQ8NHG7 77 aa8.89□□□□□ -0.99
IMP4-210ENST00000462392 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
IMP4-210ENST00000462392 ROMO1P60602 79 aa8.86□□□□□ -0.99
IMP4-210ENST00000462392 CAMK2N1Q7Z7J9 78 aa8.84□□□□□ -0.99
IMP4-210ENST00000462392 PLAC4Q8WY50 150 aa8.83□□□□□ -1
IMP4-210ENST00000462392 MT1BP07438 61 aa8.76□□□□□ -1.01
IMP4-210ENST00000462392 LCE2BO14633 110 aa8.72□□□□□ -1.01
IMP4-210ENST00000462392 PRAC1Q96KF2 57 aa8.72□□□□□ -1.01
IMP4-210ENST00000462392 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.02
IMP4-210ENST00000462392 MT1XP80297 61 aa8.49□□□□□ -1.05
IMP4-210ENST00000462392 KRTAP10-5P60370 271 aa8.48□□□□□ -1.05
IMP4-210ENST00000462392 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
IMP4-210ENST00000462392 USH2AO75445 5202 aa8.44□□□□□ -1.06
IMP4-210ENST00000462392 TNP1P09430 55 aa8.4□□□□□ -1.06
IMP4-210ENST00000462392 PRO2289Q9P1D8 64 aa8.37□□□□□ -1.07
IMP4-210ENST00000462392 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
IMP4-210ENST00000462392 KRTAP10-7P60409 375 aaPredicted RBP8.17□□□□□ -1.1
IMP4-210ENST00000462392 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
IMP4-210ENST00000462392 SSPOA2VEC9 5147 aa8.15□□□□□ -1.1
IMP4-210ENST00000462392 KRTAP19-6Q3LI70 58 aa8.15□□□□□ -1.11
IMP4-210ENST00000462392 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
IMP4-210ENST00000462392 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
IMP4-210ENST00000462392 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
IMP4-210ENST00000462392 LCE3AQ5TA76 89 aa8.07□□□□□ -1.12
IMP4-210ENST00000462392 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
IMP4-210ENST00000462392 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
IMP4-210ENST00000462392 KRTAP4-8A0A0G2JLE6 195 aa7.85□□□□□ -1.15
IMP4-210ENST00000462392 KRTAP4-8Q9BYQ9 185 aa7.85□□□□□ -1.15
IMP4-210ENST00000462392 FCGBPQ9Y6R7 5405 aaPredicted RBP7.8□□□□□ -1.16
IMP4-210ENST00000462392 KMT2DO14686 5537 aa7.78□□□□□ -1.16
IMP4-210ENST00000462392 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
IMP4-210ENST00000462392 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
IMP4-210ENST00000462392 KRTAP19-5Q3LI72 72 aa7.69□□□□□ -1.18
IMP4-210ENST00000462392 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.2
IMP4-210ENST00000462392 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
IMP4-210ENST00000462392 MT1EP04732 61 aa7.43□□□□□ -1.22
IMP4-210ENST00000462392 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.22
IMP4-210ENST00000462392 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
IMP4-210ENST00000462392 MT1LQ93083 61 aa7.3□□□□□ -1.24
IMP4-210ENST00000462392 SPRR5A0A1B0GTR4 108 aa7.27□□□□□ -1.25
IMP4-210ENST00000462392 SPRR2FQ96RM1 72 aa7.27□□□□□ -1.25
IMP4-210ENST00000462392 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
IMP4-210ENST00000462392 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
IMP4-210ENST00000462392 MUC12Q9UKN1 5478 aa7.16□□□□□ -1.26
IMP4-210ENST00000462392 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms