RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 RPL37P61927 97 aaKnown RBP2.24□□□□□ -2.05
ATP13A3-206ENST00000461660 DNAH8Q96JB1 4490 aa2.23□□□□□ -2.05
ATP13A3-206ENST00000461660 SEC61BP60468 96 aaKnown RBP2.23□□□□□ -2.05
ATP13A3-206ENST00000461660 KRTAP13-3Q3SY46 172 aa2.23□□□□□ -2.05
ATP13A3-206ENST00000461660 PKHD1P08F94 4074 aa2.22□□□□□ -2.05
ATP13A3-206ENST00000461660 BIRC6Q9NR09 4857 aa2.22□□□□□ -2.05
ATP13A3-206ENST00000461660 KIAA1109Q2LD37 5005 aa2.22□□□□□ -2.05
ATP13A3-206ENST00000461660 A8MUN3 132 aa2.22□□□□□ -2.05
ATP13A3-206ENST00000461660 TPRXLQ17RH7 258 aa2.22□□□□□ -2.05
ATP13A3-206ENST00000461660 PKD1P98161 4303 aa2.22□□□□□ -2.05
ATP13A3-206ENST00000461660 RBM12B-AS1Q9P1G2 102 aa2.21□□□□□ -2.06
ATP13A3-206ENST00000461660 DMAC1Q96GE9 116 aa2.21□□□□□ -2.06
ATP13A3-206ENST00000461660 APOBP04114 4563 aaKnown RBP2.21□□□□□ -2.06
ATP13A3-206ENST00000461660 PRR15LQ9BU68 103 aa2.21□□□□□ -2.06
ATP13A3-206ENST00000461660 A8MU10 97 aa2.2□□□□□ -2.06
ATP13A3-206ENST00000461660 VPS13BQ7Z7G8 4022 aa2.19□□□□□ -2.06
ATP13A3-206ENST00000461660 PSPHP1O15172 72 aa2.19□□□□□ -2.06
ATP13A3-206ENST00000461660 COX6B2Q6YFQ2 88 aa2.19□□□□□ -2.06
ATP13A3-206ENST00000461660 RYR1P21817 5038 aa2.19□□□□□ -2.06
ATP13A3-206ENST00000461660 A0A1B0GU69 56 aa2.17□□□□□ -2.06
ATP13A3-206ENST00000461660 PCLOQ9Y6V0 5065 aa2.17□□□□□ -2.06
ATP13A3-206ENST00000461660 A6NED7 52 aa2.17□□□□□ -2.06
ATP13A3-206ENST00000461660 HERC2O95714 4834 aa2.16□□□□□ -2.06
ATP13A3-206ENST00000461660 HSPG2P98160 4391 aa2.15□□□□□ -2.06
ATP13A3-206ENST00000461660 Q1T7F1 81 aa2.15□□□□□ -2.07
ATP13A3-206ENST00000461660 PRO0628Q9UI54 55 aa2.14□□□□□ -2.07
ATP13A3-206ENST00000461660 S4R3F8 94 aa2.14□□□□□ -2.07
ATP13A3-206ENST00000461660 ABCA13Q86UQ4 5058 aa2.14□□□□□ -2.07
ATP13A3-206ENST00000461660 A0A0A0MQY5 61 aa2.13□□□□□ -2.07
ATP13A3-206ENST00000461660 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
ATP13A3-206ENST00000461660 LINC01558Q9Y6Z2 57 aa2.13□□□□□ -2.07
ATP13A3-206ENST00000461660 LRP1Q07954 4544 aaKnown RBP2.13□□□□□ -2.07
ATP13A3-206ENST00000461660 PMAIP1Q13794 54 aa2.12□□□□□ -2.07
ATP13A3-206ENST00000461660 CSAG1Q6PB30 78 aa2.12□□□□□ -2.07
ATP13A3-206ENST00000461660 UQCR11O14957 56 aa2.11□□□□□ -2.07
ATP13A3-206ENST00000461660 MYCBP2O75592 4640 aa2.1□□□□□ -2.07
ATP13A3-206ENST00000461660 PRAC1Q96KF2 57 aa2.09□□□□□ -2.07
ATP13A3-206ENST00000461660 K7ERS5 55 aa2.09□□□□□ -2.07
ATP13A3-206ENST00000461660 Q5VV11 94 aa2.09□□□□□ -2.07
ATP13A3-206ENST00000461660 KRTAP3-1Q9BYR8 98 aa2.08□□□□□ -2.08
ATP13A3-206ENST00000461660 LCA10Q71F78 164 aa2.08□□□□□ -2.08
ATP13A3-206ENST00000461660 A0A1B0GU33 70 aa2.08□□□□□ -2.08
ATP13A3-206ENST00000461660 MIR22HGQ0VDD5 57 aa2.08□□□□□ -2.08
ATP13A3-206ENST00000461660 HERC1Q15751 4861 aa2.08□□□□□ -2.08
ATP13A3-206ENST00000461660 M0R2T5 61 aa2.07□□□□□ -2.08
ATP13A3-206ENST00000461660 FAT3Q8TDW7 4589 aa2.06□□□□□ -2.08
ATP13A3-206ENST00000461660 KRTAP19-4Q3LI73 84 aa2.06□□□□□ -2.08
ATP13A3-206ENST00000461660 ADM2Q7Z4H4 148 aa2.05□□□□□ -2.08
ATP13A3-206ENST00000461660 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
ATP13A3-206ENST00000461660 PKHD1L1Q86WI1 4243 aa2.05□□□□□ -2.08
ATP13A3-206ENST00000461660 LCE4AQ5TA78 99 aa2.04□□□□□ -2.08
ATP13A3-206ENST00000461660 TNXBP22105 4242 aa2.03□□□□□ -2.08
ATP13A3-206ENST00000461660 A0A0D9SG42 100 aa2.03□□□□□ -2.08
ATP13A3-206ENST00000461660 LINC01554Q52M75 96 aa2.02□□□□□ -2.09
ATP13A3-206ENST00000461660 R4GN34 69 aa2.02□□□□□ -2.09
ATP13A3-206ENST00000461660 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
ATP13A3-206ENST00000461660 M0QZ58 72 aa2.01□□□□□ -2.09
ATP13A3-206ENST00000461660 SPATA8Q6RVD6 105 aa2.01□□□□□ -2.09
ATP13A3-206ENST00000461660 KRTAP4-1Q9BYQ7 146 aa2.01□□□□□ -2.09
ATP13A3-206ENST00000461660 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
ATP13A3-206ENST00000461660 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
ATP13A3-206ENST00000461660 P0C880 135 aa1.99□□□□□ -2.09
ATP13A3-206ENST00000461660 H0YAA0 97 aa1.98□□□□□ -2.09
ATP13A3-206ENST00000461660 LRP2P98164 4655 aa1.98□□□□□ -2.09
ATP13A3-206ENST00000461660 UBR4Q5T4S7 5183 aa1.96□□□□□ -2.1
ATP13A3-206ENST00000461660 CRIPTQ9P021 101 aa1.96□□□□□ -2.1
ATP13A3-206ENST00000461660 HMCN2Q8NDA2 5059 aa1.96□□□□□ -2.1
ATP13A3-206ENST00000461660 KRTAP10-6P60371 365 aaPredicted RBP1.96□□□□□ -2.1
ATP13A3-206ENST00000461660 KTN1-AS1Q86SY8 53 aa1.95□□□□□ -2.1
ATP13A3-206ENST00000461660 LCE5AQ5TCM9 118 aa1.95□□□□□ -2.1
ATP13A3-206ENST00000461660 CAMK2N1Q7Z7J9 78 aa1.95□□□□□ -2.1
ATP13A3-206ENST00000461660 KRTAP9-7A8MTY7 169 aa1.94□□□□□ -2.1
ATP13A3-206ENST00000461660 LPAP08519 4548 aa1.94□□□□□ -2.1
ATP13A3-206ENST00000461660 KRTAP10-10P60014 251 aa1.93□□□□□ -2.1
ATP13A3-206ENST00000461660 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
ATP13A3-206ENST00000461660 A6NN06 94 aa1.91□□□□□ -2.1
ATP13A3-206ENST00000461660 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
ATP13A3-206ENST00000461660 PLAC4Q8WY50 150 aa1.91□□□□□ -2.1
ATP13A3-206ENST00000461660 KRTAP5-8O75690 187 aa1.9□□□□□ -2.1
ATP13A3-206ENST00000461660 ROMO1P60602 79 aa1.9□□□□□ -2.11
ATP13A3-206ENST00000461660 MT1HP80294 61 aa1.9□□□□□ -2.11
ATP13A3-206ENST00000461660 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
ATP13A3-206ENST00000461660 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
ATP13A3-206ENST00000461660 MUC2Q02817 5179 aa1.87□□□□□ -2.11
ATP13A3-206ENST00000461660 KRTAP12-2P59991 146 aa1.87□□□□□ -2.11
ATP13A3-206ENST00000461660 KRTAP9-3Q9BYQ3 159 aa1.86□□□□□ -2.11
ATP13A3-206ENST00000461660 NDUFAF8A1L188 74 aa1.86□□□□□ -2.11
ATP13A3-206ENST00000461660 MT2AP02795 61 aa1.84□□□□□ -2.11
ATP13A3-206ENST00000461660 MUC17Q685J3 4493 aa1.84□□□□□ -2.12
ATP13A3-206ENST00000461660 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
ATP13A3-206ENST00000461660 MT1FP04733 61 aa1.82□□□□□ -2.12
ATP13A3-206ENST00000461660 TNP1P09430 55 aa1.81□□□□□ -2.12
ATP13A3-206ENST00000461660 FLGP20930 4061 aaPredicted RBP1.8□□□□□ -2.12
ATP13A3-206ENST00000461660 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
ATP13A3-206ENST00000461660 KRTAP25-1Q3LHN0 102 aa1.8□□□□□ -2.12
ATP13A3-206ENST00000461660 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
ATP13A3-206ENST00000461660 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
ATP13A3-206ENST00000461660 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
ATP13A3-206ENST00000461660 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
ATP13A3-206ENST00000461660 PP632Q6XCG6 107 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms