RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 K7ERS5 55 aa2.89□□□□□ -1.95
SF3A3-202ENST00000460925 COX7BP24311 80 aa2.89□□□□□ -1.95
SF3A3-202ENST00000460925 KRTAP10-6P60371 365 aaPredicted RBP2.89□□□□□ -1.95
SF3A3-202ENST00000460925 Q6ZRX8 168 aa2.89□□□□□ -1.95
SF3A3-202ENST00000460925 ST20-AS1Q8NBB2 130 aa2.89□□□□□ -1.95
SF3A3-202ENST00000460925 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
SF3A3-202ENST00000460925 ZNF861PO60384 105 aa2.88□□□□□ -1.95
SF3A3-202ENST00000460925 SPINK7P58062 85 aa2.88□□□□□ -1.95
SF3A3-202ENST00000460925 BPY2O14599 106 aa2.87□□□□□ -1.95
SF3A3-202ENST00000460925 UBL5Q9BZL1 73 aa2.87□□□□□ -1.95
SF3A3-202ENST00000460925 LINC00575Q6W349 94 aa2.86□□□□□ -1.95
SF3A3-202ENST00000460925 Q6ZQY7 126 aa2.86□□□□□ -1.95
SF3A3-202ENST00000460925 DEFB105AQ8NG35 78 aa2.86□□□□□ -1.95
SF3A3-202ENST00000460925 ORMDL1Q9P0S3 153 aa2.86□□□□□ -1.95
SF3A3-202ENST00000460925 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
SF3A3-202ENST00000460925 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
SF3A3-202ENST00000460925 SPANXA2-OT1Q8N9U9 137 aa2.85□□□□□ -1.95
SF3A3-202ENST00000460925 LINC00208Q96KT6 92 aa2.85□□□□□ -1.95
SF3A3-202ENST00000460925 SPRR4Q96PI1 79 aa2.85□□□□□ -1.95
SF3A3-202ENST00000460925 A0A0G2JQZ4 141 aa2.84□□□□□ -1.95
SF3A3-202ENST00000460925 KRTAP13-2Q52LG2 175 aa2.84□□□□□ -1.95
SF3A3-202ENST00000460925 SPINK6Q6UWN8 80 aa2.84□□□□□ -1.95
SF3A3-202ENST00000460925 PDE6GP18545 87 aa2.83□□□□□ -1.96
SF3A3-202ENST00000460925 SPAG11AQ6PDA7 123 aa2.83□□□□□ -1.96
SF3A3-202ENST00000460925 LOC110117498A0A087WWA1 95 aa2.82□□□□□ -1.96
SF3A3-202ENST00000460925 JMJD7-PLA2G4BH0Y9G9 81 aa2.82□□□□□ -1.96
SF3A3-202ENST00000460925 H0YGX0 51 aa2.82□□□□□ -1.96
SF3A3-202ENST00000460925 MT1HL1P0DM35 61 aa2.82□□□□□ -1.96
SF3A3-202ENST00000460925 IGLV5-48A0A075B6I7 105 aa2.81□□□□□ -1.96
SF3A3-202ENST00000460925 NDUFB1O75438 58 aa2.81□□□□□ -1.96
SF3A3-202ENST00000460925 IGKV4-1P06312 121 aa2.8□□□□□ -1.96
SF3A3-202ENST00000460925 SPATA8Q6RVD6 105 aa2.8□□□□□ -1.96
SF3A3-202ENST00000460925 H3BPC8 53 aa2.79□□□□□ -1.96
SF3A3-202ENST00000460925 SPRR1BP22528 89 aa2.79□□□□□ -1.96
SF3A3-202ENST00000460925 KRTAP10-5P60370 271 aa2.79□□□□□ -1.96
SF3A3-202ENST00000460925 HERC1Q15751 4861 aa2.79□□□□□ -1.96
SF3A3-202ENST00000460925 H0Y9P7 68 aa2.78□□□□□ -1.96
SF3A3-202ENST00000460925 KRTAP10-8P60410 259 aa2.78□□□□□ -1.96
SF3A3-202ENST00000460925 DMBT1Q9UGM3 2413 aaPredicted RBP2.77□□□□□ -1.97
SF3A3-202ENST00000460925 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
SF3A3-202ENST00000460925 Q5W150 140 aa2.77□□□□□ -1.97
SF3A3-202ENST00000460925 IGFL1Q6UW32 110 aa2.77□□□□□ -1.97
SF3A3-202ENST00000460925 COA5Q86WW8 74 aa2.77□□□□□ -1.97
SF3A3-202ENST00000460925 LPAP08519 4548 aa2.77□□□□□ -1.97
SF3A3-202ENST00000460925 LINC00304Q8N9R0 145 aa2.76□□□□□ -1.97
SF3A3-202ENST00000460925 DMAC1Q96GE9 116 aa2.76□□□□□ -1.97
SF3A3-202ENST00000460925 H3BQ85 93 aa2.74□□□□□ -1.97
SF3A3-202ENST00000460925 SSBP3-AS1Q7Z2R9 100 aa2.73□□□□□ -1.97
SF3A3-202ENST00000460925 LINC00472Q9H8W2 130 aa2.73□□□□□ -1.97
SF3A3-202ENST00000460925 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
SF3A3-202ENST00000460925 UQCR11O14957 56 aa2.71□□□□□ -1.98
SF3A3-202ENST00000460925 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
SF3A3-202ENST00000460925 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SF3A3-202ENST00000460925 Q8N9L7 120 aa2.71□□□□□ -1.98
SF3A3-202ENST00000460925 A0A1B0GU33 70 aa2.7□□□□□ -1.98
SF3A3-202ENST00000460925 DEFB116Q30KQ4 102 aa2.7□□□□□ -1.98
SF3A3-202ENST00000460925 LRP2P98164 4655 aa2.7□□□□□ -1.98
SF3A3-202ENST00000460925 SPINK1P00995 79 aa2.69□□□□□ -1.98
SF3A3-202ENST00000460925 Q96NJ1 140 aa2.69□□□□□ -1.98
SF3A3-202ENST00000460925 C9orf92A6NGG3 77 aa2.66□□□□□ -1.98
SF3A3-202ENST00000460925 RPS29P62273 56 aaKnown RBP2.66□□□□□ -1.98
SF3A3-202ENST00000460925 MUC17Q685J3 4493 aa2.66□□□□□ -1.98
SF3A3-202ENST00000460925 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
SF3A3-202ENST00000460925 K7EQZ3 153 aa2.62□□□□□ -1.99
SF3A3-202ENST00000460925 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
SF3A3-202ENST00000460925 HRES1P13985 223 aa2.61□□□□□ -1.99
SF3A3-202ENST00000460925 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
SF3A3-202ENST00000460925 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
SF3A3-202ENST00000460925 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
SF3A3-202ENST00000460925 A0A1B0GU69 56 aa2.6□□□□□ -1.99
SF3A3-202ENST00000460925 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
SF3A3-202ENST00000460925 MMP24-AS1A0A0U1RRL7 71 aa2.59□□□□□ -1.99
SF3A3-202ENST00000460925 PRO2289Q9P1D8 64 aa2.59□□□□□ -1.99
SF3A3-202ENST00000460925 WFDC13Q8IUB5 93 aa2.58□□□□□ -2
SF3A3-202ENST00000460925 KRTAP4-1Q9BYQ7 146 aa2.56□□□□□ -2
SF3A3-202ENST00000460925 MUC2Q02817 5179 aa2.55□□□□□ -2
SF3A3-202ENST00000460925 KRTAP12-2P59991 146 aa2.55□□□□□ -2
SF3A3-202ENST00000460925 RPL37P61927 97 aaKnown RBP2.55□□□□□ -2
SF3A3-202ENST00000460925 PCOTHQ58A44 107 aa2.55□□□□□ -2
SF3A3-202ENST00000460925 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
SF3A3-202ENST00000460925 MRPL34Q9BQ48 92 aaKnown RBP2.54□□□□□ -2
SF3A3-202ENST00000460925 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
SF3A3-202ENST00000460925 R4GN34 69 aa2.51□□□□□ -2.01
SF3A3-202ENST00000460925 FLGP20930 4061 aaPredicted RBP2.49□□□□□ -2.01
SF3A3-202ENST00000460925 FAT4Q6V0I7 4981 aa2.48□□□□□ -2.01
SF3A3-202ENST00000460925 ACYP2P14621 99 aa2.47□□□□□ -2.01
SF3A3-202ENST00000460925 CRIPTQ9P021 101 aa2.46□□□□□ -2.02
SF3A3-202ENST00000460925 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
SF3A3-202ENST00000460925 TP53AIP1Q9HCN2 124 aa2.43□□□□□ -2.02
SF3A3-202ENST00000460925 H0YAA0 97 aa2.42□□□□□ -2.02
SF3A3-202ENST00000460925 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
SF3A3-202ENST00000460925 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
SF3A3-202ENST00000460925 COX6B2Q6YFQ2 88 aa2.4□□□□□ -2.03
SF3A3-202ENST00000460925 MT1HP80294 61 aa2.38□□□□□ -2.03
SF3A3-202ENST00000460925 INE1O15225 51 aa2.36□□□□□ -2.03
SF3A3-202ENST00000460925 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
SF3A3-202ENST00000460925 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
SF3A3-202ENST00000460925 M0R2T5 61 aa2.33□□□□□ -2.04
SF3A3-202ENST00000460925 H1FX-AS1Q4G0G2 97 aa2.33□□□□□ -2.04
SF3A3-202ENST00000460925 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms