RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 RNF213Q63HN8 5207 aa8.87□□□□□ -0.99
YIPF3-205ENST00000460547 KRTAP3-1Q9BYR8 98 aa8.84□□□□□ -0.99
YIPF3-205ENST00000460547 COX6B2Q6YFQ2 88 aa8.81□□□□□ -1
YIPF3-205ENST00000460547 SPTSSBQ8NFR3 76 aa8.79□□□□□ -1
YIPF3-205ENST00000460547 A6NED7 52 aa8.78□□□□□ -1
YIPF3-205ENST00000460547 A0A1B0GU69 56 aa8.77□□□□□ -1.01
YIPF3-205ENST00000460547 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
YIPF3-205ENST00000460547 LCA10Q71F78 164 aa8.7□□□□□ -1.02
YIPF3-205ENST00000460547 MUC2Q02817 5179 aa8.69□□□□□ -1.02
YIPF3-205ENST00000460547 A8MU10 97 aa8.66□□□□□ -1.02
YIPF3-205ENST00000460547 SEC61BP60468 96 aaKnown RBP8.64□□□□□ -1.03
YIPF3-205ENST00000460547 MUC17Q685J3 4493 aa8.63□□□□□ -1.03
YIPF3-205ENST00000460547 SEC61GP60059 68 aa8.61□□□□□ -1.03
YIPF3-205ENST00000460547 UQCR11O14957 56 aa8.58□□□□□ -1.04
YIPF3-205ENST00000460547 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
YIPF3-205ENST00000460547 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
YIPF3-205ENST00000460547 MIR22HGQ0VDD5 57 aa8.5□□□□□ -1.05
YIPF3-205ENST00000460547 S4R3F8 94 aa8.5□□□□□ -1.05
YIPF3-205ENST00000460547 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
YIPF3-205ENST00000460547 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.06
YIPF3-205ENST00000460547 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.06
YIPF3-205ENST00000460547 PMAIP1Q13794 54 aa8.45□□□□□ -1.06
YIPF3-205ENST00000460547 FAT4Q6V0I7 4981 aa8.42□□□□□ -1.06
YIPF3-205ENST00000460547 A6NN06 94 aa8.41□□□□□ -1.06
YIPF3-205ENST00000460547 A0A1B0GU33 70 aa8.4□□□□□ -1.07
YIPF3-205ENST00000460547 LCE2AQ5TA79 106 aaPredicted RBP8.37□□□□□ -1.07
YIPF3-205ENST00000460547 H0YAA0 97 aa8.35□□□□□ -1.07
YIPF3-205ENST00000460547 KRTAP10-6P60371 365 aaPredicted RBP8.32□□□□□ -1.08
YIPF3-205ENST00000460547 KRTAP3-2Q9BYR7 98 aa8.3□□□□□ -1.08
YIPF3-205ENST00000460547 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
YIPF3-205ENST00000460547 KTN1-AS1Q86SY8 53 aa8.24□□□□□ -1.09
YIPF3-205ENST00000460547 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
YIPF3-205ENST00000460547 KRTAP19-2Q3LHN2 52 aa8.19□□□□□ -1.1
YIPF3-205ENST00000460547 P0C880 135 aa8.18□□□□□ -1.1
YIPF3-205ENST00000460547 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
YIPF3-205ENST00000460547 MT1HP80294 61 aa8.12□□□□□ -1.11
YIPF3-205ENST00000460547 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
YIPF3-205ENST00000460547 M0R2T5 61 aa8.08□□□□□ -1.12
YIPF3-205ENST00000460547 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
YIPF3-205ENST00000460547 K7ERS5 55 aa8.05□□□□□ -1.12
YIPF3-205ENST00000460547 M0QZ58 72 aa8.02□□□□□ -1.13
YIPF3-205ENST00000460547 A0A0D9SG42 100 aa7.96□□□□□ -1.13
YIPF3-205ENST00000460547 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
YIPF3-205ENST00000460547 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
YIPF3-205ENST00000460547 LCE2DQ5TA82 110 aaPredicted RBP7.91□□□□□ -1.14
YIPF3-205ENST00000460547 PRAC1Q96KF2 57 aa7.88□□□□□ -1.15
YIPF3-205ENST00000460547 KRTAP12-1P59990 96 aa7.85□□□□□ -1.15
YIPF3-205ENST00000460547 R4GN34 69 aa7.83□□□□□ -1.16
YIPF3-205ENST00000460547 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
YIPF3-205ENST00000460547 ROMO1P60602 79 aa7.79□□□□□ -1.16
YIPF3-205ENST00000460547 KRTAP9-6A0A140TA67 174 aa7.76□□□□□ -1.17
YIPF3-205ENST00000460547 SPINT4Q6UDR6 99 aa7.75□□□□□ -1.17
YIPF3-205ENST00000460547 FSIP2Q5CZC0 6907 aa7.71□□□□□ -1.18
YIPF3-205ENST00000460547 KRTAP9-8Q9BYQ0 159 aa7.7□□□□□ -1.18
YIPF3-205ENST00000460547 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
YIPF3-205ENST00000460547 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
YIPF3-205ENST00000460547 CRCT1Q9UGL9 99 aa7.67□□□□□ -1.18
YIPF3-205ENST00000460547 KRTAP25-1Q3LHN0 102 aa7.65□□□□□ -1.18
YIPF3-205ENST00000460547 MT2AP02795 61 aa7.6□□□□□ -1.19
YIPF3-205ENST00000460547 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
YIPF3-205ENST00000460547 MT1FP04733 61 aa7.54□□□□□ -1.2
YIPF3-205ENST00000460547 SPRR2GQ9BYE4 73 aa7.45□□□□□ -1.22
YIPF3-205ENST00000460547 KRTAP9-3Q9BYQ3 159 aa7.45□□□□□ -1.22
YIPF3-205ENST00000460547 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.23
YIPF3-205ENST00000460547 LCE2BO14633 110 aa7.38□□□□□ -1.23
YIPF3-205ENST00000460547 USH2AO75445 5202 aa7.38□□□□□ -1.23
YIPF3-205ENST00000460547 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
YIPF3-205ENST00000460547 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
YIPF3-205ENST00000460547 SSPOA2VEC9 5147 aa7.29□□□□□ -1.24
YIPF3-205ENST00000460547 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
YIPF3-205ENST00000460547 KRTAP19-8Q3LI54 63 aa7.21□□□□□ -1.26
YIPF3-205ENST00000460547 KRTAP19-6Q3LI70 58 aa7.12□□□□□ -1.27
YIPF3-205ENST00000460547 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
YIPF3-205ENST00000460547 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
YIPF3-205ENST00000460547 FCGBPQ9Y6R7 5405 aaPredicted RBP7.1□□□□□ -1.27
YIPF3-205ENST00000460547 TNP1P09430 55 aa7.09□□□□□ -1.27
YIPF3-205ENST00000460547 MT1BP07438 61 aa7.06□□□□□ -1.28
YIPF3-205ENST00000460547 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
YIPF3-205ENST00000460547 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
YIPF3-205ENST00000460547 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
YIPF3-205ENST00000460547 MT1XP80297 61 aa6.91□□□□□ -1.3
YIPF3-205ENST00000460547 KRTAP10-5P60370 271 aa6.9□□□□□ -1.3
YIPF3-205ENST00000460547 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
YIPF3-205ENST00000460547 SYNE2Q8WXH0 6885 aaKnown RBP6.86□□□□□ -1.31
YIPF3-205ENST00000460547 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.32
YIPF3-205ENST00000460547 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
YIPF3-205ENST00000460547 KRTAP6-3Q3LI67 103 aa6.7□□□□□ -1.34
YIPF3-205ENST00000460547 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
YIPF3-205ENST00000460547 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
YIPF3-205ENST00000460547 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
YIPF3-205ENST00000460547 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
YIPF3-205ENST00000460547 KRTAP12-3P60328 96 aa6.46□□□□□ -1.37
YIPF3-205ENST00000460547 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
YIPF3-205ENST00000460547 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
YIPF3-205ENST00000460547 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
YIPF3-205ENST00000460547 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
YIPF3-205ENST00000460547 NEBP20929 6669 aa6.35□□□□□ -1.39
YIPF3-205ENST00000460547 KMT2DO14686 5537 aa6.34□□□□□ -1.39
YIPF3-205ENST00000460547 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
YIPF3-205ENST00000460547 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms