RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
PLOD3-209ENST00000460475 A8MUN3 132 aa8.17□□□□□ -1.1
PLOD3-209ENST00000460475 MT-ATP8P03928 68 aa8.16□□□□□ -1.1
PLOD3-209ENST00000460475 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
PLOD3-209ENST00000460475 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
PLOD3-209ENST00000460475 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
PLOD3-209ENST00000460475 NDUFC1O43677 76 aa8.08□□□□□ -1.12
PLOD3-209ENST00000460475 KRTAP19-6Q3LI70 58 aa8.07□□□□□ -1.12
PLOD3-209ENST00000460475 SMIM20Q8N5G0 67 aa8.05□□□□□ -1.12
PLOD3-209ENST00000460475 TRAV7A0A075B6U4 112 aa8.03□□□□□ -1.12
PLOD3-209ENST00000460475 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
PLOD3-209ENST00000460475 H0YAA0 97 aa8.02□□□□□ -1.13
PLOD3-209ENST00000460475 DMAC1Q96GE9 116 aa8□□□□□ -1.13
PLOD3-209ENST00000460475 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.97□□□□□ -1.13
PLOD3-209ENST00000460475 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
PLOD3-209ENST00000460475 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.14
PLOD3-209ENST00000460475 MT1BP07438 61 aa7.92□□□□□ -1.14
PLOD3-209ENST00000460475 Q5VV11 94 aa7.9□□□□□ -1.14
PLOD3-209ENST00000460475 KRTAP9-7A8MTY7 169 aa7.87□□□□□ -1.15
PLOD3-209ENST00000460475 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
PLOD3-209ENST00000460475 ACYP2P14621 99 aa7.82□□□□□ -1.16
PLOD3-209ENST00000460475 SERP2Q8N6R1 65 aa7.82□□□□□ -1.16
PLOD3-209ENST00000460475 SNURFQ9Y675 71 aa7.8□□□□□ -1.16
PLOD3-209ENST00000460475 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
PLOD3-209ENST00000460475 C20orf197Q8N268 126 aa7.76□□□□□ -1.17
PLOD3-209ENST00000460475 SPANXA2-OT1Q8N9U9 137 aa7.74□□□□□ -1.17
PLOD3-209ENST00000460475 P0C880 135 aa7.73□□□□□ -1.17
PLOD3-209ENST00000460475 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
PLOD3-209ENST00000460475 SYNE2Q8WXH0 6885 aaKnown RBP7.73□□□□□ -1.17
PLOD3-209ENST00000460475 A6NN06 94 aa7.72□□□□□ -1.17
PLOD3-209ENST00000460475 KRTAP10-5P60370 271 aa7.7□□□□□ -1.18
PLOD3-209ENST00000460475 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
PLOD3-209ENST00000460475 R4GN34 69 aa7.66□□□□□ -1.18
PLOD3-209ENST00000460475 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
PLOD3-209ENST00000460475 COX7CP15954 63 aa7.62□□□□□ -1.19
PLOD3-209ENST00000460475 M0QZ58 72 aa7.59□□□□□ -1.19
PLOD3-209ENST00000460475 KRTAP6-3Q3LI67 103 aa7.55□□□□□ -1.2
PLOD3-209ENST00000460475 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
PLOD3-209ENST00000460475 H7BZZ5 65 aa7.48□□□□□ -1.21
PLOD3-209ENST00000460475 MT1XP80297 61 aa7.47□□□□□ -1.21
PLOD3-209ENST00000460475 COA5Q86WW8 74 aa7.47□□□□□ -1.21
PLOD3-209ENST00000460475 CYSTM1Q9H1C7 97 aa7.47□□□□□ -1.21
PLOD3-209ENST00000460475 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.22
PLOD3-209ENST00000460475 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
PLOD3-209ENST00000460475 ANAPC13Q9BS18 74 aa7.41□□□□□ -1.22
PLOD3-209ENST00000460475 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
PLOD3-209ENST00000460475 KMT2DO14686 5537 aa7.31□□□□□ -1.24
PLOD3-209ENST00000460475 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
PLOD3-209ENST00000460475 KRTAP13-4Q3LI77 160 aa7.3□□□□□ -1.24
PLOD3-209ENST00000460475 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
PLOD3-209ENST00000460475 CCDC179H3BU77 68 aa7.27□□□□□ -1.25
PLOD3-209ENST00000460475 SEC61GP60059 68 aa7.26□□□□□ -1.25
PLOD3-209ENST00000460475 NEBP20929 6669 aa7.26□□□□□ -1.25
PLOD3-209ENST00000460475 SERP1Q9Y6X1 66 aa7.24□□□□□ -1.25
PLOD3-209ENST00000460475 MDN1Q9NU22 5596 aa7.2□□□□□ -1.26
PLOD3-209ENST00000460475 A0A1B0GU33 70 aa7.15□□□□□ -1.26
PLOD3-209ENST00000460475 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.26
PLOD3-209ENST00000460475 KRTAP10-7P60409 375 aaPredicted RBP7.11□□□□□ -1.27
PLOD3-209ENST00000460475 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
PLOD3-209ENST00000460475 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
PLOD3-209ENST00000460475 SPATA8Q6RVD6 105 aa7.09□□□□□ -1.27
PLOD3-209ENST00000460475 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
PLOD3-209ENST00000460475 A0A1B0GU69 56 aa7.07□□□□□ -1.28
PLOD3-209ENST00000460475 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
PLOD3-209ENST00000460475 SPRR2FQ96RM1 72 aa7.06□□□□□ -1.28
PLOD3-209ENST00000460475 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
PLOD3-209ENST00000460475 A0A0D9SG42 100 aa7.04□□□□□ -1.28
PLOD3-209ENST00000460475 TMEM258P61165 79 aa7.02□□□□□ -1.29
PLOD3-209ENST00000460475 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
PLOD3-209ENST00000460475 SMIM26A0A096LP01 95 aa6.94□□□□□ -1.3
PLOD3-209ENST00000460475 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
PLOD3-209ENST00000460475 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
PLOD3-209ENST00000460475 PRR15LQ9BU68 103 aa6.91□□□□□ -1.3
PLOD3-209ENST00000460475 SPRR2EP22531 72 aa6.9□□□□□ -1.3
PLOD3-209ENST00000460475 SPRR2BP35325 72 aa6.9□□□□□ -1.3
PLOD3-209ENST00000460475 SPRR2AP35326 72 aa6.9□□□□□ -1.3
PLOD3-209ENST00000460475 LCE1AQ5T7P2 110 aa6.89□□□□□ -1.31
PLOD3-209ENST00000460475 A8MU10 97 aa6.86□□□□□ -1.31
PLOD3-209ENST00000460475 KRTAP20-1Q3LI63 56 aa6.86□□□□□ -1.31
PLOD3-209ENST00000460475 KRTAP2-3P0C7H8 128 aa6.76□□□□□ -1.33
PLOD3-209ENST00000460475 KRTAP2-4Q9BYR9 128 aa6.76□□□□□ -1.33
PLOD3-209ENST00000460475 UQCR11O14957 56 aa6.71□□□□□ -1.34
PLOD3-209ENST00000460475 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
PLOD3-209ENST00000460475 SPRR2DP22532 72 aa6.67□□□□□ -1.34
PLOD3-209ENST00000460475 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
PLOD3-209ENST00000460475 MT1EP04732 61 aa6.61□□□□□ -1.35
PLOD3-209ENST00000460475 V9GYY9 64 aa6.61□□□□□ -1.35
PLOD3-209ENST00000460475 Q1T7F1 81 aa6.6□□□□□ -1.35
PLOD3-209ENST00000460475 TNP1P09430 55 aa6.58□□□□□ -1.36
PLOD3-209ENST00000460475 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
PLOD3-209ENST00000460475 KRTAP2-2Q9BYT5 123 aa6.56□□□□□ -1.36
PLOD3-209ENST00000460475 KRTAP2-1Q9BYU5 128 aa6.56□□□□□ -1.36
PLOD3-209ENST00000460475 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
PLOD3-209ENST00000460475 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
PLOD3-209ENST00000460475 PSPHP1O15172 72 aa6.52□□□□□ -1.37
PLOD3-209ENST00000460475 KRTAP19-3Q7Z4W3 81 aa6.51□□□□□ -1.37
PLOD3-209ENST00000460475 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
PLOD3-209ENST00000460475 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
PLOD3-209ENST00000460475 PCP4P48539 62 aa6.45□□□□□ -1.38
PLOD3-209ENST00000460475 RPS28P62857 69 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms