RNA–Protein interactions for RNA: ENST00000459894.6

SFXN2-202, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 2,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-202ENST00000459894 ROMO1P60602 79 aa7.37□□□□□ -1.23
SFXN2-202ENST00000459894 RPL37P61927 97 aaKnown RBP7.37□□□□□ -1.23
SFXN2-202ENST00000459894 FAT3Q8TDW7 4589 aa7.36□□□□□ -1.23
SFXN2-202ENST00000459894 EPPK1P58107 5090 aaKnown RBP7.34□□□□□ -1.23
SFXN2-202ENST00000459894 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
SFXN2-202ENST00000459894 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
SFXN2-202ENST00000459894 S4R3F8 94 aa7.33□□□□□ -1.24
SFXN2-202ENST00000459894 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
SFXN2-202ENST00000459894 TNXBP22105 4242 aa7.31□□□□□ -1.24
SFXN2-202ENST00000459894 CRIPTQ9P021 101 aa7.31□□□□□ -1.24
SFXN2-202ENST00000459894 XP32Q5T750 250 aa7.29□□□□□ -1.24
SFXN2-202ENST00000459894 H3BS24 57 aa7.27□□□□□ -1.25
SFXN2-202ENST00000459894 A0A0D9SG42 100 aa7.27□□□□□ -1.25
SFXN2-202ENST00000459894 LRP1Q07954 4544 aaKnown RBP7.25□□□□□ -1.25
SFXN2-202ENST00000459894 HSPG2P98160 4391 aa7.25□□□□□ -1.25
SFXN2-202ENST00000459894 RYR1P21817 5038 aa7.24□□□□□ -1.25
SFXN2-202ENST00000459894 KIAA1109Q2LD37 5005 aa7.24□□□□□ -1.25
SFXN2-202ENST00000459894 P0C880 135 aa7.2□□□□□ -1.26
SFXN2-202ENST00000459894 Q5VSD8 79 aa7.19□□□□□ -1.26
SFXN2-202ENST00000459894 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
SFXN2-202ENST00000459894 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
SFXN2-202ENST00000459894 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
SFXN2-202ENST00000459894 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
SFXN2-202ENST00000459894 BIRC6Q9NR09 4857 aa7.08□□□□□ -1.28
SFXN2-202ENST00000459894 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
SFXN2-202ENST00000459894 SPINT4Q6UDR6 99 aa7.05□□□□□ -1.28
SFXN2-202ENST00000459894 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
SFXN2-202ENST00000459894 MYCBP2O75592 4640 aa7.04□□□□□ -1.28
SFXN2-202ENST00000459894 M0QZ58 72 aa7.04□□□□□ -1.28
SFXN2-202ENST00000459894 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
SFXN2-202ENST00000459894 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
SFXN2-202ENST00000459894 HERC2O95714 4834 aa6.97□□□□□ -1.29
SFXN2-202ENST00000459894 LPAP08519 4548 aa6.93□□□□□ -1.3
SFXN2-202ENST00000459894 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
SFXN2-202ENST00000459894 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
SFXN2-202ENST00000459894 LRP2P98164 4655 aa6.84□□□□□ -1.31
SFXN2-202ENST00000459894 R4GN34 69 aa6.8□□□□□ -1.32
SFXN2-202ENST00000459894 PCLOQ9Y6V0 5065 aa6.76□□□□□ -1.33
SFXN2-202ENST00000459894 NDUFAF8A1L188 74 aa6.76□□□□□ -1.33
SFXN2-202ENST00000459894 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.34
SFXN2-202ENST00000459894 J3QL48 77 aa6.7□□□□□ -1.34
SFXN2-202ENST00000459894 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
SFXN2-202ENST00000459894 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
SFXN2-202ENST00000459894 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
SFXN2-202ENST00000459894 HERC1Q15751 4861 aa6.56□□□□□ -1.36
SFXN2-202ENST00000459894 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
SFXN2-202ENST00000459894 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
SFXN2-202ENST00000459894 PP632Q6XCG6 107 aa6.51□□□□□ -1.37
SFXN2-202ENST00000459894 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
SFXN2-202ENST00000459894 HMCN2Q8NDA2 5059 aa6.44□□□□□ -1.38
SFXN2-202ENST00000459894 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
SFXN2-202ENST00000459894 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
SFXN2-202ENST00000459894 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
SFXN2-202ENST00000459894 TNP1P09430 55 aa6.27□□□□□ -1.41
SFXN2-202ENST00000459894 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
SFXN2-202ENST00000459894 MUC2Q02817 5179 aa6.19□□□□□ -1.42
SFXN2-202ENST00000459894 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
SFXN2-202ENST00000459894 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
SFXN2-202ENST00000459894 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
SFXN2-202ENST00000459894 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
SFXN2-202ENST00000459894 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
SFXN2-202ENST00000459894 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
SFXN2-202ENST00000459894 FAT4Q6V0I7 4981 aa5.93□□□□□ -1.46
SFXN2-202ENST00000459894 M0R2T5 61 aa5.9□□□□□ -1.47
SFXN2-202ENST00000459894 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
SFXN2-202ENST00000459894 MT1HP80294 61 aa5.86□□□□□ -1.47
SFXN2-202ENST00000459894 MT1FP04733 61 aa5.82□□□□□ -1.48
SFXN2-202ENST00000459894 MT2AP02795 61 aa5.81□□□□□ -1.48
SFXN2-202ENST00000459894 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
SFXN2-202ENST00000459894 KRTAP19-8Q3LI54 63 aa5.78□□□□□ -1.48
SFXN2-202ENST00000459894 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
SFXN2-202ENST00000459894 KRTAP9-8Q9BYQ0 159 aa5.76□□□□□ -1.49
SFXN2-202ENST00000459894 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
SFXN2-202ENST00000459894 MT1BP07438 61 aa5.67□□□□□ -1.5
SFXN2-202ENST00000459894 MT1XP80297 61 aa5.67□□□□□ -1.5
SFXN2-202ENST00000459894 LCE2AQ5TA79 106 aaPredicted RBP5.66□□□□□ -1.5
SFXN2-202ENST00000459894 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
SFXN2-202ENST00000459894 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
SFXN2-202ENST00000459894 INE1O15225 51 aa5.52□□□□□ -1.53
SFXN2-202ENST00000459894 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
SFXN2-202ENST00000459894 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
SFXN2-202ENST00000459894 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
SFXN2-202ENST00000459894 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
SFXN2-202ENST00000459894 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
SFXN2-202ENST00000459894 LCE2BO14633 110 aa5.25□□□□□ -1.57
SFXN2-202ENST00000459894 USH2AO75445 5202 aa5.17□□□□□ -1.58
SFXN2-202ENST00000459894 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
SFXN2-202ENST00000459894 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
SFXN2-202ENST00000459894 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
SFXN2-202ENST00000459894 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
SFXN2-202ENST00000459894 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
SFXN2-202ENST00000459894 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
SFXN2-202ENST00000459894 KMT2DO14686 5537 aa5.05□□□□□ -1.6
SFXN2-202ENST00000459894 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
SFXN2-202ENST00000459894 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
SFXN2-202ENST00000459894 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
SFXN2-202ENST00000459894 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
SFXN2-202ENST00000459894 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
SFXN2-202ENST00000459894 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
SFXN2-202ENST00000459894 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms