RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
HDAC7-217ENST00000459625 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
HDAC7-217ENST00000459625 BSNQ9UPA5 3926 aa6.44□□□□□ -1.38
HDAC7-217ENST00000459625 CSMD3Q7Z407 3707 aa6.42□□□□□ -1.38
HDAC7-217ENST00000459625 OTOGQ6ZRI0 2925 aa6.41□□□□□ -1.38
HDAC7-217ENST00000459625 MT1HP80294 61 aa6.4□□□□□ -1.38
HDAC7-217ENST00000459625 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
HDAC7-217ENST00000459625 VPS13CQ709C8 3753 aa6.33□□□□□ -1.4
HDAC7-217ENST00000459625 KRTAP4-1Q9BYQ7 146 aa6.33□□□□□ -1.4
HDAC7-217ENST00000459625 KRTAP19-5Q3LI72 72 aa6.26□□□□□ -1.41
HDAC7-217ENST00000459625 SPRR2EP22531 72 aa6.26□□□□□ -1.41
HDAC7-217ENST00000459625 SPRR2BP35325 72 aa6.26□□□□□ -1.41
HDAC7-217ENST00000459625 SPRR2AP35326 72 aa6.26□□□□□ -1.41
HDAC7-217ENST00000459625 MT2AP02795 61 aa6.23□□□□□ -1.41
HDAC7-217ENST00000459625 MT1FP04733 61 aa6.12□□□□□ -1.43
HDAC7-217ENST00000459625 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
HDAC7-217ENST00000459625 SPRR2DP22532 72 aa6.04□□□□□ -1.44
HDAC7-217ENST00000459625 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
HDAC7-217ENST00000459625 ZNF469Q96JG9 3925 aaPredicted RBP6.01□□□□□ -1.45
HDAC7-217ENST00000459625 DNAH1Q9P2D7 4330 aa6.01□□□□□ -1.45
HDAC7-217ENST00000459625 DNAH9Q9NYC9 4486 aa5.99□□□□□ -1.45
HDAC7-217ENST00000459625 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.45
HDAC7-217ENST00000459625 DNAH2Q9P225 4427 aa5.96□□□□□ -1.45
HDAC7-217ENST00000459625 DNAH5Q8TE73 4624 aa5.93□□□□□ -1.46
HDAC7-217ENST00000459625 AKAP9Q99996 3911 aa5.92□□□□□ -1.46
HDAC7-217ENST00000459625 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
HDAC7-217ENST00000459625 LCE2BO14633 110 aa5.88□□□□□ -1.47
HDAC7-217ENST00000459625 MT1GP13640 62 aa5.87□□□□□ -1.47
HDAC7-217ENST00000459625 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
HDAC7-217ENST00000459625 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
HDAC7-217ENST00000459625 FAT1Q14517 4588 aa5.76□□□□□ -1.49
HDAC7-217ENST00000459625 DNAH17Q9UFH2 4485 aa5.74□□□□□ -1.49
HDAC7-217ENST00000459625 FAT2Q9NYQ8 4349 aa5.71□□□□□ -1.49
HDAC7-217ENST00000459625 DNAH8Q96JB1 4490 aa5.69□□□□□ -1.5
HDAC7-217ENST00000459625 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
HDAC7-217ENST00000459625 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
HDAC7-217ENST00000459625 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
HDAC7-217ENST00000459625 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
HDAC7-217ENST00000459625 ANK2Q01484 3957 aa5.6□□□□□ -1.51
HDAC7-217ENST00000459625 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
HDAC7-217ENST00000459625 LRP1BQ9NZR2 4599 aa5.58□□□□□ -1.52
HDAC7-217ENST00000459625 DNAH3Q8TD57 4116 aa5.57□□□□□ -1.52
HDAC7-217ENST00000459625 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
HDAC7-217ENST00000459625 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
HDAC7-217ENST00000459625 MT4P47944 62 aa5.53□□□□□ -1.52
HDAC7-217ENST00000459625 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
HDAC7-217ENST00000459625 SACSQ9NZJ4 4579 aa5.5□□□□□ -1.53
HDAC7-217ENST00000459625 MT1XP80297 61 aa5.48□□□□□ -1.53
HDAC7-217ENST00000459625 LCE3DQ9BYE3 92 aa5.48□□□□□ -1.53
HDAC7-217ENST00000459625 DYNC1H1Q14204 4646 aaKnown RBP5.46□□□□□ -1.54
HDAC7-217ENST00000459625 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
HDAC7-217ENST00000459625 VPS13DQ5THJ4 4388 aa5.45□□□□□ -1.54
HDAC7-217ENST00000459625 DYNC2H1Q8NCM8 4307 aaKnown RBP5.45□□□□□ -1.54
HDAC7-217ENST00000459625 RYR1P21817 5038 aa5.43□□□□□ -1.54
HDAC7-217ENST00000459625 FRAS1Q86XX4 4008 aa5.43□□□□□ -1.54
HDAC7-217ENST00000459625 STARD9Q9P2P6 4700 aa5.42□□□□□ -1.54
HDAC7-217ENST00000459625 DNAH7Q8WXX0 4024 aa5.4□□□□□ -1.55
HDAC7-217ENST00000459625 KRTAP19-8Q3LI54 63 aa5.39□□□□□ -1.55
HDAC7-217ENST00000459625 PRKDCP78527 4128 aaKnown RBP5.38□□□□□ -1.55
HDAC7-217ENST00000459625 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
HDAC7-217ENST00000459625 LYSTQ99698 3801 aa5.34□□□□□ -1.55
HDAC7-217ENST00000459625 MT1BP07438 61 aa5.34□□□□□ -1.55
HDAC7-217ENST00000459625 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
HDAC7-217ENST00000459625 APOBP04114 4563 aaKnown RBP5.33□□□□□ -1.56
HDAC7-217ENST00000459625 DNHD1Q96M86 4753 aa5.32□□□□□ -1.56
HDAC7-217ENST00000459625 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
HDAC7-217ENST00000459625 LCE1BQ5T7P3 118 aa5.32□□□□□ -1.56
HDAC7-217ENST00000459625 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
HDAC7-217ENST00000459625 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
HDAC7-217ENST00000459625 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
HDAC7-217ENST00000459625 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
HDAC7-217ENST00000459625 CMYA5Q8N3K9 4069 aa5.23□□□□□ -1.57
HDAC7-217ENST00000459625 LRP1Q07954 4544 aaKnown RBP5.23□□□□□ -1.57
HDAC7-217ENST00000459625 DNAH6Q9C0G6 4158 aa5.22□□□□□ -1.57
HDAC7-217ENST00000459625 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
HDAC7-217ENST00000459625 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
HDAC7-217ENST00000459625 RYR3Q15413 4870 aa5.12□□□□□ -1.59
HDAC7-217ENST00000459625 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
HDAC7-217ENST00000459625 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
HDAC7-217ENST00000459625 PRM1P04553 51 aa5.05□□□□□ -1.6
HDAC7-217ENST00000459625 LPAP08519 4548 aa5.04□□□□□ -1.6
HDAC7-217ENST00000459625 MT1LQ93083 61 aa5.02□□□□□ -1.61
HDAC7-217ENST00000459625 MYCBP2O75592 4640 aa5.02□□□□□ -1.61
HDAC7-217ENST00000459625 MT3P25713 68 aa5.02□□□□□ -1.61
HDAC7-217ENST00000459625 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
HDAC7-217ENST00000459625 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
HDAC7-217ENST00000459625 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
HDAC7-217ENST00000459625 MT1EP04732 61 aa4.97□□□□□ -1.61
HDAC7-217ENST00000459625 PKD1P98161 4303 aa4.92□□□□□ -1.62
HDAC7-217ENST00000459625 HECTD4Q9Y4D8 3996 aa4.91□□□□□ -1.62
HDAC7-217ENST00000459625 MT1MQ8N339 61 aa4.91□□□□□ -1.62
HDAC7-217ENST00000459625 HSPG2P98160 4391 aa4.89□□□□□ -1.63
HDAC7-217ENST00000459625 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
HDAC7-217ENST00000459625 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
HDAC7-217ENST00000459625 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
HDAC7-217ENST00000459625 PKHD1P08F94 4074 aa4.85□□□□□ -1.63
HDAC7-217ENST00000459625 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
HDAC7-217ENST00000459625 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
HDAC7-217ENST00000459625 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
HDAC7-217ENST00000459625 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms