RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 ADM2Q7Z4H4 148 aa7.65□□□□□ -1.18
NT5C3A-208ENST00000456458 FAT3Q8TDW7 4589 aa7.63□□□□□ -1.19
NT5C3A-208ENST00000456458 TNXBP22105 4242 aa7.62□□□□□ -1.19
NT5C3A-208ENST00000456458 XP32Q5T750 250 aa7.61□□□□□ -1.19
NT5C3A-208ENST00000456458 K7ERS5 55 aa7.59□□□□□ -1.19
NT5C3A-208ENST00000456458 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
NT5C3A-208ENST00000456458 S4R3F8 94 aa7.54□□□□□ -1.2
NT5C3A-208ENST00000456458 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
NT5C3A-208ENST00000456458 CSAG1Q6PB30 78 aa7.52□□□□□ -1.2
NT5C3A-208ENST00000456458 HSPG2P98160 4391 aa7.52□□□□□ -1.21
NT5C3A-208ENST00000456458 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
NT5C3A-208ENST00000456458 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
NT5C3A-208ENST00000456458 MT1HL1P0DM35 61 aa7.47□□□□□ -1.21
NT5C3A-208ENST00000456458 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
NT5C3A-208ENST00000456458 DMBT1Q9UGM3 2413 aaPredicted RBP7.41□□□□□ -1.22
NT5C3A-208ENST00000456458 TPRXLQ17RH7 258 aa7.41□□□□□ -1.22
NT5C3A-208ENST00000456458 RYR1P21817 5038 aa7.41□□□□□ -1.22
NT5C3A-208ENST00000456458 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
NT5C3A-208ENST00000456458 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
NT5C3A-208ENST00000456458 ROMO1P60602 79 aa7.33□□□□□ -1.24
NT5C3A-208ENST00000456458 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
NT5C3A-208ENST00000456458 A0A0D9SG42 100 aa7.28□□□□□ -1.24
NT5C3A-208ENST00000456458 P0C880 135 aa7.28□□□□□ -1.24
NT5C3A-208ENST00000456458 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
NT5C3A-208ENST00000456458 RYR3Q15413 4870 aa7.23□□□□□ -1.25
NT5C3A-208ENST00000456458 M0QZ58 72 aa7.22□□□□□ -1.25
NT5C3A-208ENST00000456458 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
NT5C3A-208ENST00000456458 KIAA1109Q2LD37 5005 aa7.17□□□□□ -1.26
NT5C3A-208ENST00000456458 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
NT5C3A-208ENST00000456458 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
NT5C3A-208ENST00000456458 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
NT5C3A-208ENST00000456458 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
NT5C3A-208ENST00000456458 KRTAP12-1P59990 96 aa7.1□□□□□ -1.27
NT5C3A-208ENST00000456458 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
NT5C3A-208ENST00000456458 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
NT5C3A-208ENST00000456458 LRP2P98164 4655 aa7.06□□□□□ -1.28
NT5C3A-208ENST00000456458 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
NT5C3A-208ENST00000456458 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
NT5C3A-208ENST00000456458 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
NT5C3A-208ENST00000456458 LPAP08519 4548 aa7.03□□□□□ -1.28
NT5C3A-208ENST00000456458 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
NT5C3A-208ENST00000456458 J3QL48 77 aa7□□□□□ -1.29
NT5C3A-208ENST00000456458 R4GN34 69 aa6.98□□□□□ -1.29
NT5C3A-208ENST00000456458 EPPK1P58107 5090 aaKnown RBP6.96□□□□□ -1.3
NT5C3A-208ENST00000456458 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
NT5C3A-208ENST00000456458 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
NT5C3A-208ENST00000456458 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
NT5C3A-208ENST00000456458 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
NT5C3A-208ENST00000456458 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
NT5C3A-208ENST00000456458 KRTAP19-2Q3LHN2 52 aa6.79□□□□□ -1.32
NT5C3A-208ENST00000456458 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
NT5C3A-208ENST00000456458 H3BS24 57 aa6.73□□□□□ -1.33
NT5C3A-208ENST00000456458 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
NT5C3A-208ENST00000456458 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
NT5C3A-208ENST00000456458 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
NT5C3A-208ENST00000456458 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
NT5C3A-208ENST00000456458 HERC2O95714 4834 aa6.66□□□□□ -1.34
NT5C3A-208ENST00000456458 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
NT5C3A-208ENST00000456458 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
NT5C3A-208ENST00000456458 FLGP20930 4061 aaPredicted RBP6.58□□□□□ -1.36
NT5C3A-208ENST00000456458 BIRC6Q9NR09 4857 aa6.57□□□□□ -1.36
NT5C3A-208ENST00000456458 KRTAP9-8Q9BYQ0 159 aa6.54□□□□□ -1.36
NT5C3A-208ENST00000456458 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
NT5C3A-208ENST00000456458 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
NT5C3A-208ENST00000456458 NDUFAF8A1L188 74 aa6.47□□□□□ -1.37
NT5C3A-208ENST00000456458 KRTAP4-12Q9BQ66 201 aa6.47□□□□□ -1.37
NT5C3A-208ENST00000456458 HERC1Q15751 4861 aa6.45□□□□□ -1.38
NT5C3A-208ENST00000456458 KRTAP23-1A1A580 65 aa6.43□□□□□ -1.38
NT5C3A-208ENST00000456458 TNP1P09430 55 aa6.42□□□□□ -1.38
NT5C3A-208ENST00000456458 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
NT5C3A-208ENST00000456458 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
NT5C3A-208ENST00000456458 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
NT5C3A-208ENST00000456458 HMCN2Q8NDA2 5059 aa6.32□□□□□ -1.4
NT5C3A-208ENST00000456458 MUC2Q02817 5179 aa6.3□□□□□ -1.4
NT5C3A-208ENST00000456458 M0R2T5 61 aa6.3□□□□□ -1.4
NT5C3A-208ENST00000456458 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
NT5C3A-208ENST00000456458 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
NT5C3A-208ENST00000456458 MT1HP80294 61 aa6.24□□□□□ -1.41
NT5C3A-208ENST00000456458 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
NT5C3A-208ENST00000456458 PCLOQ9Y6V0 5065 aa6.21□□□□□ -1.42
NT5C3A-208ENST00000456458 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
NT5C3A-208ENST00000456458 MT2AP02795 61 aa6.13□□□□□ -1.43
NT5C3A-208ENST00000456458 MT1FP04733 61 aa6.11□□□□□ -1.43
NT5C3A-208ENST00000456458 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
NT5C3A-208ENST00000456458 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
NT5C3A-208ENST00000456458 FAT4Q6V0I7 4981 aa6.02□□□□□ -1.45
NT5C3A-208ENST00000456458 RNF213Q63HN8 5207 aa6.01□□□□□ -1.45
NT5C3A-208ENST00000456458 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
NT5C3A-208ENST00000456458 MT1BP07438 61 aa5.93□□□□□ -1.46
NT5C3A-208ENST00000456458 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
NT5C3A-208ENST00000456458 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
NT5C3A-208ENST00000456458 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
NT5C3A-208ENST00000456458 MT1XP80297 61 aa5.88□□□□□ -1.47
NT5C3A-208ENST00000456458 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
NT5C3A-208ENST00000456458 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
NT5C3A-208ENST00000456458 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
NT5C3A-208ENST00000456458 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
NT5C3A-208ENST00000456458 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
NT5C3A-208ENST00000456458 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
NT5C3A-208ENST00000456458 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms