RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 XP32Q5T750 250 aa9.02□□□□□ -0.96
PTPN6-204ENST00000456013 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.96
PTPN6-204ENST00000456013 RYR2Q92736 4967 aa9.02□□□□□ -0.97
PTPN6-204ENST00000456013 S4R3F8 94 aa9.01□□□□□ -0.97
PTPN6-204ENST00000456013 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
PTPN6-204ENST00000456013 LRP1Q07954 4544 aaKnown RBP8.99□□□□□ -0.97
PTPN6-204ENST00000456013 ROMO1P60602 79 aa8.99□□□□□ -0.97
PTPN6-204ENST00000456013 HSPG2P98160 4391 aa8.97□□□□□ -0.97
PTPN6-204ENST00000456013 DMBT1Q9UGM3 2413 aaPredicted RBP8.96□□□□□ -0.97
PTPN6-204ENST00000456013 Q5VSD8 79 aa8.96□□□□□ -0.98
PTPN6-204ENST00000456013 CRIPTQ9P021 101 aa8.96□□□□□ -0.98
PTPN6-204ENST00000456013 A0A0D9SG42 100 aa8.92□□□□□ -0.98
PTPN6-204ENST00000456013 P0C880 135 aa8.88□□□□□ -0.99
PTPN6-204ENST00000456013 KMT2CQ8NEZ4 4911 aaKnown RBP8.83□□□□□ -1
PTPN6-204ENST00000456013 MYCBP2O75592 4640 aa8.77□□□□□ -1.01
PTPN6-204ENST00000456013 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
PTPN6-204ENST00000456013 H3BS24 57 aa8.76□□□□□ -1.01
PTPN6-204ENST00000456013 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
PTPN6-204ENST00000456013 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
PTPN6-204ENST00000456013 KRTAP12-2P59991 146 aa8.73□□□□□ -1.01
PTPN6-204ENST00000456013 RYR1P21817 5038 aa8.71□□□□□ -1.02
PTPN6-204ENST00000456013 KRTAP12-1P59990 96 aa8.68□□□□□ -1.02
PTPN6-204ENST00000456013 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
PTPN6-204ENST00000456013 M0QZ58 72 aa8.63□□□□□ -1.03
PTPN6-204ENST00000456013 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
PTPN6-204ENST00000456013 LPAP08519 4548 aa8.58□□□□□ -1.04
PTPN6-204ENST00000456013 LRP2P98164 4655 aa8.54□□□□□ -1.04
PTPN6-204ENST00000456013 RYR3Q15413 4870 aa8.51□□□□□ -1.05
PTPN6-204ENST00000456013 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
PTPN6-204ENST00000456013 KRTAP15-1Q3LI76 137 aa8.42□□□□□ -1.06
PTPN6-204ENST00000456013 R4GN34 69 aa8.36□□□□□ -1.07
PTPN6-204ENST00000456013 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
PTPN6-204ENST00000456013 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
PTPN6-204ENST00000456013 MUC17Q685J3 4493 aa8.24□□□□□ -1.09
PTPN6-204ENST00000456013 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
PTPN6-204ENST00000456013 KRTAP4-5Q9BYR2 181 aa8.23□□□□□ -1.09
PTPN6-204ENST00000456013 NDUFAF8A1L188 74 aa8.21□□□□□ -1.1
PTPN6-204ENST00000456013 EPPK1P58107 5090 aaKnown RBP8.2□□□□□ -1.1
PTPN6-204ENST00000456013 KRTAP4-1Q9BYQ7 146 aa8.19□□□□□ -1.1
PTPN6-204ENST00000456013 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
PTPN6-204ENST00000456013 J3QL48 77 aa8□□□□□ -1.13
PTPN6-204ENST00000456013 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
PTPN6-204ENST00000456013 CAMK2N1Q7Z7J9 78 aa7.94□□□□□ -1.14
PTPN6-204ENST00000456013 PP632Q6XCG6 107 aa7.93□□□□□ -1.14
PTPN6-204ENST00000456013 HERC2O95714 4834 aa7.78□□□□□ -1.16
PTPN6-204ENST00000456013 FLGP20930 4061 aaPredicted RBP7.78□□□□□ -1.16
PTPN6-204ENST00000456013 BIRC6Q9NR09 4857 aa7.71□□□□□ -1.18
PTPN6-204ENST00000456013 TNP1P09430 55 aa7.69□□□□□ -1.18
PTPN6-204ENST00000456013 HERC1Q15751 4861 aa7.68□□□□□ -1.18
PTPN6-204ENST00000456013 KRTAP23-1A1A580 65 aa7.67□□□□□ -1.18
PTPN6-204ENST00000456013 MUC2Q02817 5179 aa7.65□□□□□ -1.18
PTPN6-204ENST00000456013 LUZP6Q538Z0 58 aa7.64□□□□□ -1.19
PTPN6-204ENST00000456013 A0A0A0MQY5 61 aa7.63□□□□□ -1.19
PTPN6-204ENST00000456013 LCE2CQ5TA81 110 aa7.53□□□□□ -1.2
PTPN6-204ENST00000456013 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
PTPN6-204ENST00000456013 PCLOQ9Y6V0 5065 aa7.51□□□□□ -1.21
PTPN6-204ENST00000456013 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.22
PTPN6-204ENST00000456013 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
PTPN6-204ENST00000456013 HMCN2Q8NDA2 5059 aa7.4□□□□□ -1.23
PTPN6-204ENST00000456013 M0R2T5 61 aa7.32□□□□□ -1.24
PTPN6-204ENST00000456013 MT1HP80294 61 aa7.31□□□□□ -1.24
PTPN6-204ENST00000456013 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
PTPN6-204ENST00000456013 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
PTPN6-204ENST00000456013 MT1FP04733 61 aa7.24□□□□□ -1.25
PTPN6-204ENST00000456013 MT2AP02795 61 aa7.24□□□□□ -1.25
PTPN6-204ENST00000456013 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
PTPN6-204ENST00000456013 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
PTPN6-204ENST00000456013 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
PTPN6-204ENST00000456013 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
PTPN6-204ENST00000456013 RNF213Q63HN8 5207 aa7.08□□□□□ -1.28
PTPN6-204ENST00000456013 MT1BP07438 61 aa7.05□□□□□ -1.28
PTPN6-204ENST00000456013 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
PTPN6-204ENST00000456013 MT1XP80297 61 aa7.03□□□□□ -1.28
PTPN6-204ENST00000456013 UBR4Q5T4S7 5183 aa7.02□□□□□ -1.29
PTPN6-204ENST00000456013 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
PTPN6-204ENST00000456013 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
PTPN6-204ENST00000456013 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
PTPN6-204ENST00000456013 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
PTPN6-204ENST00000456013 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
PTPN6-204ENST00000456013 INE1O15225 51 aa6.66□□□□□ -1.34
PTPN6-204ENST00000456013 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
PTPN6-204ENST00000456013 LCE2BO14633 110 aa6.56□□□□□ -1.36
PTPN6-204ENST00000456013 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
PTPN6-204ENST00000456013 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
PTPN6-204ENST00000456013 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
PTPN6-204ENST00000456013 LCE2AQ5TA79 106 aaPredicted RBP6.33□□□□□ -1.4
PTPN6-204ENST00000456013 KRTAP9-6A8MVA2 160 aa6.28□□□□□ -1.4
PTPN6-204ENST00000456013 KMT2DO14686 5537 aa6.27□□□□□ -1.41
PTPN6-204ENST00000456013 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
PTPN6-204ENST00000456013 USH2AO75445 5202 aa6.26□□□□□ -1.41
PTPN6-204ENST00000456013 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
PTPN6-204ENST00000456013 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
PTPN6-204ENST00000456013 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
PTPN6-204ENST00000456013 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
PTPN6-204ENST00000456013 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
PTPN6-204ENST00000456013 MT1LQ93083 61 aa6.09□□□□□ -1.43
PTPN6-204ENST00000456013 MT1EP04732 61 aa6.07□□□□□ -1.44
PTPN6-204ENST00000456013 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
PTPN6-204ENST00000456013 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
PTPN6-204ENST00000456013 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms