RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 KLKP1Q107X0 134 aa7.35□□□□□ -1.23
NCKIPSD-208ENST00000454134 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
NCKIPSD-208ENST00000454134 A6NN06 94 aa7.33□□□□□ -1.24
NCKIPSD-208ENST00000454134 H0Y9P7 68 aa7.31□□□□□ -1.24
NCKIPSD-208ENST00000454134 UQCRQO14949 82 aa7.31□□□□□ -1.24
NCKIPSD-208ENST00000454134 LINC00643Q86TS7 51 aa7.28□□□□□ -1.24
NCKIPSD-208ENST00000454134 J3QR89 54 aa7.26□□□□□ -1.25
NCKIPSD-208ENST00000454134 ATOX1O00244 68 aa7.25□□□□□ -1.25
NCKIPSD-208ENST00000454134 KRTAP10-5P60370 271 aa7.23□□□□□ -1.25
NCKIPSD-208ENST00000454134 IMUPQ9GZP8 106 aa7.22□□□□□ -1.25
NCKIPSD-208ENST00000454134 NDUFC1O43677 76 aa7.21□□□□□ -1.26
NCKIPSD-208ENST00000454134 CRIPTQ9P021 101 aa7.2□□□□□ -1.26
NCKIPSD-208ENST00000454134 LINC00208Q96KT6 92 aa7.19□□□□□ -1.26
NCKIPSD-208ENST00000454134 A8MUN3 132 aa7.14□□□□□ -1.27
NCKIPSD-208ENST00000454134 H0YAA0 97 aa7.14□□□□□ -1.27
NCKIPSD-208ENST00000454134 OCR1Q9BZK8 76 aa7.13□□□□□ -1.27
NCKIPSD-208ENST00000454134 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
NCKIPSD-208ENST00000454134 MP68P56378 58 aa7.1□□□□□ -1.27
NCKIPSD-208ENST00000454134 K7ERU9 68 aa7.06□□□□□ -1.28
NCKIPSD-208ENST00000454134 NEBP20929 6669 aa7.02□□□□□ -1.29
NCKIPSD-208ENST00000454134 SCGB1A1P11684 91 aa6.99□□□□□ -1.29
NCKIPSD-208ENST00000454134 KRTAP5-9P26371 169 aa6.98□□□□□ -1.29
NCKIPSD-208ENST00000454134 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
NCKIPSD-208ENST00000454134 H3BPC8 53 aa6.97□□□□□ -1.29
NCKIPSD-208ENST00000454134 P0C880 135 aa6.96□□□□□ -1.3
NCKIPSD-208ENST00000454134 DMAC1Q96GE9 116 aa6.94□□□□□ -1.3
NCKIPSD-208ENST00000454134 MT-ATP8P03928 68 aa6.93□□□□□ -1.3
NCKIPSD-208ENST00000454134 MT1XP80297 61 aa6.92□□□□□ -1.3
NCKIPSD-208ENST00000454134 R4GN34 69 aa6.92□□□□□ -1.3
NCKIPSD-208ENST00000454134 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
NCKIPSD-208ENST00000454134 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.3
NCKIPSD-208ENST00000454134 M0QZ58 72 aa6.88□□□□□ -1.31
NCKIPSD-208ENST00000454134 C20orf197Q8N268 126 aa6.88□□□□□ -1.31
NCKIPSD-208ENST00000454134 KMT2DO14686 5537 aa6.87□□□□□ -1.31
NCKIPSD-208ENST00000454134 KRTAP3-2Q9BYR7 98 aa6.87□□□□□ -1.31
NCKIPSD-208ENST00000454134 SMIM20Q8N5G0 67 aa6.86□□□□□ -1.31
NCKIPSD-208ENST00000454134 KRTAP20-1Q3LI63 56 aa6.85□□□□□ -1.31
NCKIPSD-208ENST00000454134 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
NCKIPSD-208ENST00000454134 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
NCKIPSD-208ENST00000454134 MDN1Q9NU22 5596 aa6.79□□□□□ -1.32
NCKIPSD-208ENST00000454134 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
NCKIPSD-208ENST00000454134 ACYP2P14621 99 aa6.76□□□□□ -1.33
NCKIPSD-208ENST00000454134 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
NCKIPSD-208ENST00000454134 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
NCKIPSD-208ENST00000454134 SPRR2EP22531 72 aa6.71□□□□□ -1.34
NCKIPSD-208ENST00000454134 SPRR2BP35325 72 aa6.71□□□□□ -1.34
NCKIPSD-208ENST00000454134 SPRR2AP35326 72 aa6.71□□□□□ -1.34
NCKIPSD-208ENST00000454134 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
NCKIPSD-208ENST00000454134 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
NCKIPSD-208ENST00000454134 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
NCKIPSD-208ENST00000454134 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
NCKIPSD-208ENST00000454134 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.34
NCKIPSD-208ENST00000454134 SNURFQ9Y675 71 aa6.65□□□□□ -1.34
NCKIPSD-208ENST00000454134 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
NCKIPSD-208ENST00000454134 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
NCKIPSD-208ENST00000454134 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
NCKIPSD-208ENST00000454134 LCE1AQ5T7P2 110 aa6.61□□□□□ -1.35
NCKIPSD-208ENST00000454134 SPANXA2-OT1Q8N9U9 137 aa6.57□□□□□ -1.36
NCKIPSD-208ENST00000454134 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
NCKIPSD-208ENST00000454134 COX7CP15954 63 aa6.49□□□□□ -1.37
NCKIPSD-208ENST00000454134 SPRR2DP22532 72 aa6.48□□□□□ -1.37
NCKIPSD-208ENST00000454134 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
NCKIPSD-208ENST00000454134 KRTAP2-2Q9BYT5 123 aa6.43□□□□□ -1.38
NCKIPSD-208ENST00000454134 KRTAP2-1Q9BYU5 128 aa6.43□□□□□ -1.38
NCKIPSD-208ENST00000454134 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
NCKIPSD-208ENST00000454134 COA5Q86WW8 74 aa6.37□□□□□ -1.39
NCKIPSD-208ENST00000454134 H7BZZ5 65 aa6.35□□□□□ -1.39
NCKIPSD-208ENST00000454134 ANAPC13Q9BS18 74 aa6.35□□□□□ -1.39
NCKIPSD-208ENST00000454134 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
NCKIPSD-208ENST00000454134 CYSTM1Q9H1C7 97 aa6.31□□□□□ -1.4
NCKIPSD-208ENST00000454134 A0A0D9SG42 100 aa6.28□□□□□ -1.4
NCKIPSD-208ENST00000454134 SEC61GP60059 68 aa6.26□□□□□ -1.41
NCKIPSD-208ENST00000454134 SERP1Q9Y6X1 66 aa6.26□□□□□ -1.41
NCKIPSD-208ENST00000454134 SPATA8Q6RVD6 105 aa6.24□□□□□ -1.41
NCKIPSD-208ENST00000454134 CCDC179H3BU77 68 aa6.2□□□□□ -1.42
NCKIPSD-208ENST00000454134 A0A1B0GU33 70 aa6.19□□□□□ -1.42
NCKIPSD-208ENST00000454134 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
NCKIPSD-208ENST00000454134 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
NCKIPSD-208ENST00000454134 MT1EP04732 61 aa6.13□□□□□ -1.43
NCKIPSD-208ENST00000454134 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
NCKIPSD-208ENST00000454134 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
NCKIPSD-208ENST00000454134 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
NCKIPSD-208ENST00000454134 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.43
NCKIPSD-208ENST00000454134 A0A1B0GU69 56 aa6.04□□□□□ -1.44
NCKIPSD-208ENST00000454134 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
NCKIPSD-208ENST00000454134 DSTQ03001 7570 aaKnown RBP6.03□□□□□ -1.44
NCKIPSD-208ENST00000454134 TMEM258P61165 79 aa6.02□□□□□ -1.45
NCKIPSD-208ENST00000454134 A8MU10 97 aa6.01□□□□□ -1.45
NCKIPSD-208ENST00000454134 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
NCKIPSD-208ENST00000454134 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
NCKIPSD-208ENST00000454134 MT1GP13640 62 aa5.92□□□□□ -1.46
NCKIPSD-208ENST00000454134 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
NCKIPSD-208ENST00000454134 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
NCKIPSD-208ENST00000454134 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
NCKIPSD-208ENST00000454134 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
NCKIPSD-208ENST00000454134 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
NCKIPSD-208ENST00000454134 MT1LQ93083 61 aa5.85□□□□□ -1.47
NCKIPSD-208ENST00000454134 TNP1P09430 55 aa5.84□□□□□ -1.47
NCKIPSD-208ENST00000454134 MT1MQ8N339 61 aa5.84□□□□□ -1.47
NCKIPSD-208ENST00000454134 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms