RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
VPS16-205ENST00000453689 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
VPS16-205ENST00000453689 ANAPC13Q9BS18 74 aa7.03□□□□□ -1.28
VPS16-205ENST00000453689 S4R3F8 94 aa7.03□□□□□ -1.28
VPS16-205ENST00000453689 DMAC1Q96GE9 116 aa6.98□□□□□ -1.29
VPS16-205ENST00000453689 LCA10Q71F78 164 aa6.97□□□□□ -1.29
VPS16-205ENST00000453689 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
VPS16-205ENST00000453689 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
VPS16-205ENST00000453689 USH2AO75445 5202 aa6.92□□□□□ -1.3
VPS16-205ENST00000453689 LCE2BO14633 110 aa6.92□□□□□ -1.3
VPS16-205ENST00000453689 NDUFC1O43677 76 aa6.91□□□□□ -1.3
VPS16-205ENST00000453689 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
VPS16-205ENST00000453689 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
VPS16-205ENST00000453689 ACYP2P14621 99 aa6.88□□□□□ -1.31
VPS16-205ENST00000453689 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
VPS16-205ENST00000453689 CYSTM1Q9H1C7 97 aa6.87□□□□□ -1.31
VPS16-205ENST00000453689 H7BZZ5 65 aa6.86□□□□□ -1.31
VPS16-205ENST00000453689 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
VPS16-205ENST00000453689 CHKB-CPT1BH3BT56 60 aa6.77□□□□□ -1.33
VPS16-205ENST00000453689 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
VPS16-205ENST00000453689 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
VPS16-205ENST00000453689 H0YAA0 97 aa6.73□□□□□ -1.33
VPS16-205ENST00000453689 COA5Q86WW8 74 aa6.71□□□□□ -1.34
VPS16-205ENST00000453689 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
VPS16-205ENST00000453689 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
VPS16-205ENST00000453689 TMEM258P61165 79 aa6.65□□□□□ -1.34
VPS16-205ENST00000453689 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.34
VPS16-205ENST00000453689 KRTAP19-6Q3LI70 58 aa6.64□□□□□ -1.35
VPS16-205ENST00000453689 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
VPS16-205ENST00000453689 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
VPS16-205ENST00000453689 CRIPTQ9P021 101 aa6.59□□□□□ -1.35
VPS16-205ENST00000453689 PCP4P48539 62 aa6.56□□□□□ -1.36
VPS16-205ENST00000453689 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
VPS16-205ENST00000453689 P0C880 135 aa6.55□□□□□ -1.36
VPS16-205ENST00000453689 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
VPS16-205ENST00000453689 MT1BP07438 61 aa6.53□□□□□ -1.36
VPS16-205ENST00000453689 Q5VV11 94 aa6.52□□□□□ -1.37
VPS16-205ENST00000453689 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
VPS16-205ENST00000453689 R4GN34 69 aa6.46□□□□□ -1.38
VPS16-205ENST00000453689 SEC61GP60059 68 aa6.45□□□□□ -1.38
VPS16-205ENST00000453689 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
VPS16-205ENST00000453689 M0QZ58 72 aa6.42□□□□□ -1.38
VPS16-205ENST00000453689 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
VPS16-205ENST00000453689 A6NN06 94 aa6.38□□□□□ -1.39
VPS16-205ENST00000453689 A0A1B0GU69 56 aa6.36□□□□□ -1.39
VPS16-205ENST00000453689 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
VPS16-205ENST00000453689 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
VPS16-205ENST00000453689 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
VPS16-205ENST00000453689 A0A1B0GU33 70 aa6.29□□□□□ -1.4
VPS16-205ENST00000453689 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
VPS16-205ENST00000453689 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
VPS16-205ENST00000453689 SYNE2Q8WXH0 6885 aaKnown RBP6.24□□□□□ -1.41
VPS16-205ENST00000453689 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
VPS16-205ENST00000453689 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
VPS16-205ENST00000453689 KRTAP6-3Q3LI67 103 aa6.22□□□□□ -1.41
VPS16-205ENST00000453689 SMIM26A0A096LP01 95 aa6.21□□□□□ -1.42
VPS16-205ENST00000453689 V9GYY9 64 aa6.21□□□□□ -1.42
VPS16-205ENST00000453689 SPATA8Q6RVD6 105 aa6.2□□□□□ -1.42
VPS16-205ENST00000453689 Q1T7F1 81 aa6.17□□□□□ -1.42
VPS16-205ENST00000453689 MT1XP80297 61 aa6.15□□□□□ -1.42
VPS16-205ENST00000453689 A0A0D9SG42 100 aa6.13□□□□□ -1.43
VPS16-205ENST00000453689 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
VPS16-205ENST00000453689 UQCR11O14957 56 aa6.09□□□□□ -1.43
VPS16-205ENST00000453689 PSPHP1O15172 72 aa6.09□□□□□ -1.43
VPS16-205ENST00000453689 A8MU10 97 aa6.05□□□□□ -1.44
VPS16-205ENST00000453689 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
VPS16-205ENST00000453689 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
VPS16-205ENST00000453689 KRTAP5-9P26371 169 aa6□□□□□ -1.45
VPS16-205ENST00000453689 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
VPS16-205ENST00000453689 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
VPS16-205ENST00000453689 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
VPS16-205ENST00000453689 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
VPS16-205ENST00000453689 KMT2DO14686 5537 aa5.98□□□□□ -1.45
VPS16-205ENST00000453689 A6NED7 52 aa5.92□□□□□ -1.46
VPS16-205ENST00000453689 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
VPS16-205ENST00000453689 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
VPS16-205ENST00000453689 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
VPS16-205ENST00000453689 NEBP20929 6669 aa5.84□□□□□ -1.47
VPS16-205ENST00000453689 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
VPS16-205ENST00000453689 KRTAP10-12P60413 245 aa5.84□□□□□ -1.47
VPS16-205ENST00000453689 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
VPS16-205ENST00000453689 MDN1Q9NU22 5596 aa5.81□□□□□ -1.48
VPS16-205ENST00000453689 K7ERS5 55 aa5.81□□□□□ -1.48
VPS16-205ENST00000453689 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
VPS16-205ENST00000453689 SPRR2EP22531 72 aa5.74□□□□□ -1.49
VPS16-205ENST00000453689 SPRR2BP35325 72 aa5.74□□□□□ -1.49
VPS16-205ENST00000453689 SPRR2AP35326 72 aa5.74□□□□□ -1.49
VPS16-205ENST00000453689 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
VPS16-205ENST00000453689 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
VPS16-205ENST00000453689 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
VPS16-205ENST00000453689 TNP1P09430 55 aa5.64□□□□□ -1.51
VPS16-205ENST00000453689 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
VPS16-205ENST00000453689 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
VPS16-205ENST00000453689 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
VPS16-205ENST00000453689 SPRR2DP22532 72 aa5.53□□□□□ -1.52
VPS16-205ENST00000453689 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
VPS16-205ENST00000453689 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
VPS16-205ENST00000453689 ROMO1P60602 79 aa5.49□□□□□ -1.53
VPS16-205ENST00000453689 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
VPS16-205ENST00000453689 MT1EP04732 61 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms