RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 WFDC13Q8IUB5 93 aa6.31□□□□□ -1.4
CHD3-206ENST00000452447 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
CHD3-206ENST00000452447 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
CHD3-206ENST00000452447 MMP24-AS1A0A0U1RRL7 71 aa6.29□□□□□ -1.4
CHD3-206ENST00000452447 MRPL34Q9BQ48 92 aaKnown RBP6.29□□□□□ -1.4
CHD3-206ENST00000452447 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
CHD3-206ENST00000452447 NDUFS5O43920 106 aa6.26□□□□□ -1.41
CHD3-206ENST00000452447 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
CHD3-206ENST00000452447 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
CHD3-206ENST00000452447 Q1T7F1 81 aa6.24□□□□□ -1.41
CHD3-206ENST00000452447 SNURFQ9Y675 71 aa6.24□□□□□ -1.41
CHD3-206ENST00000452447 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
CHD3-206ENST00000452447 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
CHD3-206ENST00000452447 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
CHD3-206ENST00000452447 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
CHD3-206ENST00000452447 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
CHD3-206ENST00000452447 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
CHD3-206ENST00000452447 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
CHD3-206ENST00000452447 C7orf65Q6ZTY9 151 aa6.15□□□□□ -1.42
CHD3-206ENST00000452447 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.42
CHD3-206ENST00000452447 Q5W150 140 aa6.14□□□□□ -1.43
CHD3-206ENST00000452447 CYP4F30PQ9H0H9 118 aa6.14□□□□□ -1.43
CHD3-206ENST00000452447 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
CHD3-206ENST00000452447 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
CHD3-206ENST00000452447 MP68P56378 58 aa6.12□□□□□ -1.43
CHD3-206ENST00000452447 H3BPC8 53 aa6.09□□□□□ -1.43
CHD3-206ENST00000452447 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
CHD3-206ENST00000452447 H0Y9P7 68 aa6.07□□□□□ -1.44
CHD3-206ENST00000452447 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
CHD3-206ENST00000452447 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
CHD3-206ENST00000452447 C1orf64Q8NEQ6 169 aa6.06□□□□□ -1.44
CHD3-206ENST00000452447 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
CHD3-206ENST00000452447 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
CHD3-206ENST00000452447 Q5VV11 94 aa5.97□□□□□ -1.45
CHD3-206ENST00000452447 PSPHP1O15172 72 aa5.97□□□□□ -1.45
CHD3-206ENST00000452447 A8MUN3 132 aa5.95□□□□□ -1.46
CHD3-206ENST00000452447 S4R3F8 94 aa5.94□□□□□ -1.46
CHD3-206ENST00000452447 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
CHD3-206ENST00000452447 A6NN06 94 aa5.93□□□□□ -1.46
CHD3-206ENST00000452447 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
CHD3-206ENST00000452447 H3BS24 57 aa5.91□□□□□ -1.46
CHD3-206ENST00000452447 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
CHD3-206ENST00000452447 LCA10Q71F78 164 aa5.9□□□□□ -1.46
CHD3-206ENST00000452447 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
CHD3-206ENST00000452447 PRR15LQ9BU68 103 aa5.85□□□□□ -1.47
CHD3-206ENST00000452447 A6NED7 52 aa5.83□□□□□ -1.48
CHD3-206ENST00000452447 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
CHD3-206ENST00000452447 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
CHD3-206ENST00000452447 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
CHD3-206ENST00000452447 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
CHD3-206ENST00000452447 A8MU10 97 aa5.77□□□□□ -1.49
CHD3-206ENST00000452447 MT1BP07438 61 aa5.77□□□□□ -1.49
CHD3-206ENST00000452447 ACYP2P14621 99 aa5.76□□□□□ -1.49
CHD3-206ENST00000452447 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
CHD3-206ENST00000452447 COA5Q86WW8 74 aa5.76□□□□□ -1.49
CHD3-206ENST00000452447 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
CHD3-206ENST00000452447 NEBP20929 6669 aa5.74□□□□□ -1.49
CHD3-206ENST00000452447 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
CHD3-206ENST00000452447 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.5
CHD3-206ENST00000452447 LINC01554Q52M75 96 aa5.67□□□□□ -1.5
CHD3-206ENST00000452447 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
CHD3-206ENST00000452447 H0YAA0 97 aa5.63□□□□□ -1.51
CHD3-206ENST00000452447 ADM2Q7Z4H4 148 aa5.59□□□□□ -1.52
CHD3-206ENST00000452447 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
CHD3-206ENST00000452447 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
CHD3-206ENST00000452447 KMT2DO14686 5537 aa5.54□□□□□ -1.52
CHD3-206ENST00000452447 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
CHD3-206ENST00000452447 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
CHD3-206ENST00000452447 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
CHD3-206ENST00000452447 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
CHD3-206ENST00000452447 R4GN34 69 aa5.46□□□□□ -1.53
CHD3-206ENST00000452447 UQCR11O14957 56 aa5.45□□□□□ -1.54
CHD3-206ENST00000452447 A0A1B0GU69 56 aa5.43□□□□□ -1.54
CHD3-206ENST00000452447 P0C880 135 aa5.42□□□□□ -1.54
CHD3-206ENST00000452447 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
CHD3-206ENST00000452447 KRTAP20-1Q3LI63 56 aa5.42□□□□□ -1.54
CHD3-206ENST00000452447 M0QZ58 72 aa5.41□□□□□ -1.54
CHD3-206ENST00000452447 MT1XP80297 61 aa5.41□□□□□ -1.54
CHD3-206ENST00000452447 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
CHD3-206ENST00000452447 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
CHD3-206ENST00000452447 KRTAP12-2P59991 146 aa5.3□□□□□ -1.56
CHD3-206ENST00000452447 SPRR2EP22531 72 aa5.29□□□□□ -1.56
CHD3-206ENST00000452447 SPRR2BP35325 72 aa5.29□□□□□ -1.56
CHD3-206ENST00000452447 SPRR2AP35326 72 aa5.29□□□□□ -1.56
CHD3-206ENST00000452447 ROMO1P60602 79 aa5.29□□□□□ -1.56
CHD3-206ENST00000452447 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
CHD3-206ENST00000452447 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
CHD3-206ENST00000452447 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
CHD3-206ENST00000452447 A0A1B0GU33 70 aa5.22□□□□□ -1.57
CHD3-206ENST00000452447 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
CHD3-206ENST00000452447 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
CHD3-206ENST00000452447 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
CHD3-206ENST00000452447 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
CHD3-206ENST00000452447 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
CHD3-206ENST00000452447 SPRR2DP22532 72 aa5.11□□□□□ -1.59
CHD3-206ENST00000452447 K7ERS5 55 aa5.1□□□□□ -1.59
CHD3-206ENST00000452447 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
CHD3-206ENST00000452447 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
CHD3-206ENST00000452447 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
CHD3-206ENST00000452447 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms