RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 RYR2Q92736 4967 aa7.31□□□□□ -1.24
CHFR-205ENST00000450056 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
CHFR-205ENST00000450056 MYCBP2O75592 4640 aa7.27□□□□□ -1.25
CHFR-205ENST00000450056 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
CHFR-205ENST00000450056 DYNC1H1Q14204 4646 aaKnown RBP7.25□□□□□ -1.25
CHFR-205ENST00000450056 S4R3F8 94 aa7.24□□□□□ -1.25
CHFR-205ENST00000450056 KMT2CQ8NEZ4 4911 aaKnown RBP7.23□□□□□ -1.25
CHFR-205ENST00000450056 RPS29P62273 56 aaKnown RBP7.22□□□□□ -1.25
CHFR-205ENST00000450056 KRTAP12-2P59991 146 aa7.19□□□□□ -1.26
CHFR-205ENST00000450056 APOBP04114 4563 aaKnown RBP7.18□□□□□ -1.26
CHFR-205ENST00000450056 LRP1Q07954 4544 aaKnown RBP7.17□□□□□ -1.26
CHFR-205ENST00000450056 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
CHFR-205ENST00000450056 KRTAP10-8P60410 259 aa7.15□□□□□ -1.26
CHFR-205ENST00000450056 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
CHFR-205ENST00000450056 KRTAP10-4P60372 401 aaPredicted RBP7.13□□□□□ -1.27
CHFR-205ENST00000450056 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
CHFR-205ENST00000450056 RYR3Q15413 4870 aa7.08□□□□□ -1.28
CHFR-205ENST00000450056 PKHD1L1Q86WI1 4243 aa7.05□□□□□ -1.28
CHFR-205ENST00000450056 J3QL48 77 aa7.02□□□□□ -1.29
CHFR-205ENST00000450056 KRTAP12-1P59990 96 aa7.02□□□□□ -1.29
CHFR-205ENST00000450056 HSPG2P98160 4391 aa7.02□□□□□ -1.29
CHFR-205ENST00000450056 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
CHFR-205ENST00000450056 XP32Q5T750 250 aa6.96□□□□□ -1.29
CHFR-205ENST00000450056 M0QZ58 72 aa6.95□□□□□ -1.3
CHFR-205ENST00000450056 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
CHFR-205ENST00000450056 LPAP08519 4548 aa6.94□□□□□ -1.3
CHFR-205ENST00000450056 RYR1P21817 5038 aa6.91□□□□□ -1.3
CHFR-205ENST00000450056 KRTAP17-1Q9BYP8 105 aa6.91□□□□□ -1.3
CHFR-205ENST00000450056 R4GN34 69 aa6.89□□□□□ -1.31
CHFR-205ENST00000450056 TNXBP22105 4242 aa6.85□□□□□ -1.31
CHFR-205ENST00000450056 Q5VSD8 79 aa6.84□□□□□ -1.31
CHFR-205ENST00000450056 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
CHFR-205ENST00000450056 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
CHFR-205ENST00000450056 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
CHFR-205ENST00000450056 KIAA1109Q2LD37 5005 aa6.8□□□□□ -1.32
CHFR-205ENST00000450056 LRP2P98164 4655 aa6.78□□□□□ -1.32
CHFR-205ENST00000450056 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
CHFR-205ENST00000450056 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
CHFR-205ENST00000450056 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
CHFR-205ENST00000450056 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
CHFR-205ENST00000450056 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
CHFR-205ENST00000450056 MUC2Q02817 5179 aa6.54□□□□□ -1.36
CHFR-205ENST00000450056 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
CHFR-205ENST00000450056 HERC2O95714 4834 aa6.44□□□□□ -1.38
CHFR-205ENST00000450056 PP632Q6XCG6 107 aa6.37□□□□□ -1.39
CHFR-205ENST00000450056 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
CHFR-205ENST00000450056 TNP1P09430 55 aa6.29□□□□□ -1.4
CHFR-205ENST00000450056 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
CHFR-205ENST00000450056 FAT4Q6V0I7 4981 aa6.18□□□□□ -1.42
CHFR-205ENST00000450056 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
CHFR-205ENST00000450056 MUC17Q685J3 4493 aa6.15□□□□□ -1.43
CHFR-205ENST00000450056 HERC1Q15751 4861 aa6.12□□□□□ -1.43
CHFR-205ENST00000450056 HMCN2Q8NDA2 5059 aa6.05□□□□□ -1.44
CHFR-205ENST00000450056 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
CHFR-205ENST00000450056 KRTAP19-2Q3LHN2 52 aa6.02□□□□□ -1.45
CHFR-205ENST00000450056 M0R2T5 61 aa5.98□□□□□ -1.45
CHFR-205ENST00000450056 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
CHFR-205ENST00000450056 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
CHFR-205ENST00000450056 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
CHFR-205ENST00000450056 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
CHFR-205ENST00000450056 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
CHFR-205ENST00000450056 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
CHFR-205ENST00000450056 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
CHFR-205ENST00000450056 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
CHFR-205ENST00000450056 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.51
CHFR-205ENST00000450056 INE1O15225 51 aa5.61□□□□□ -1.51
CHFR-205ENST00000450056 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
CHFR-205ENST00000450056 MT1HP80294 61 aa5.6□□□□□ -1.51
CHFR-205ENST00000450056 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.52
CHFR-205ENST00000450056 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
CHFR-205ENST00000450056 USH2AO75445 5202 aa5.51□□□□□ -1.53
CHFR-205ENST00000450056 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
CHFR-205ENST00000450056 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
CHFR-205ENST00000450056 MT1FP04733 61 aa5.49□□□□□ -1.53
CHFR-205ENST00000450056 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
CHFR-205ENST00000450056 KMT2DO14686 5537 aa5.44□□□□□ -1.54
CHFR-205ENST00000450056 MT2AP02795 61 aa5.43□□□□□ -1.54
CHFR-205ENST00000450056 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
CHFR-205ENST00000450056 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
CHFR-205ENST00000450056 MT1XP80297 61 aa5.35□□□□□ -1.55
CHFR-205ENST00000450056 MT1BP07438 61 aa5.29□□□□□ -1.56
CHFR-205ENST00000450056 LCE2AQ5TA79 106 aaPredicted RBP5.26□□□□□ -1.57
CHFR-205ENST00000450056 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
CHFR-205ENST00000450056 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
CHFR-205ENST00000450056 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
CHFR-205ENST00000450056 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
CHFR-205ENST00000450056 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
CHFR-205ENST00000450056 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
CHFR-205ENST00000450056 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
CHFR-205ENST00000450056 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
CHFR-205ENST00000450056 LCE2BO14633 110 aa5.07□□□□□ -1.6
CHFR-205ENST00000450056 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
CHFR-205ENST00000450056 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
CHFR-205ENST00000450056 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
CHFR-205ENST00000450056 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
CHFR-205ENST00000450056 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
CHFR-205ENST00000450056 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
CHFR-205ENST00000450056 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
CHFR-205ENST00000450056 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
CHFR-205ENST00000450056 MUC12Q9UKN1 5478 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms