RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 A0A1B0GVY2 172 aa6□□□□□ -1.45
SYVN1-204ENST00000449943 H1FX-AS1Q4G0G2 97 aa5.99□□□□□ -1.45
SYVN1-204ENST00000449943 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
SYVN1-204ENST00000449943 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
SYVN1-204ENST00000449943 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
SYVN1-204ENST00000449943 R4GN34 69 aa5.9□□□□□ -1.47
SYVN1-204ENST00000449943 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.47
SYVN1-204ENST00000449943 FAT3Q8TDW7 4589 aa5.87□□□□□ -1.47
SYVN1-204ENST00000449943 RYR2Q92736 4967 aa5.86□□□□□ -1.47
SYVN1-204ENST00000449943 KMT2CQ8NEZ4 4911 aaKnown RBP5.83□□□□□ -1.48
SYVN1-204ENST00000449943 XP32Q5T750 250 aa5.83□□□□□ -1.48
SYVN1-204ENST00000449943 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
SYVN1-204ENST00000449943 KRTAP25-1Q3LHN0 102 aa5.82□□□□□ -1.48
SYVN1-204ENST00000449943 KRTAP10-8P60410 259 aa5.82□□□□□ -1.48
SYVN1-204ENST00000449943 HSPG2P98160 4391 aa5.81□□□□□ -1.48
SYVN1-204ENST00000449943 TNXBP22105 4242 aa5.8□□□□□ -1.48
SYVN1-204ENST00000449943 M0QZ58 72 aa5.8□□□□□ -1.48
SYVN1-204ENST00000449943 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
SYVN1-204ENST00000449943 TPRXLQ17RH7 258 aa5.78□□□□□ -1.48
SYVN1-204ENST00000449943 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
SYVN1-204ENST00000449943 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
SYVN1-204ENST00000449943 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
SYVN1-204ENST00000449943 KRTAP3-2Q9BYR7 98 aa5.72□□□□□ -1.49
SYVN1-204ENST00000449943 P0C880 135 aa5.72□□□□□ -1.49
SYVN1-204ENST00000449943 ROMO1P60602 79 aa5.72□□□□□ -1.49
SYVN1-204ENST00000449943 KRTAP17-1Q9BYP8 105 aa5.69□□□□□ -1.5
SYVN1-204ENST00000449943 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
SYVN1-204ENST00000449943 RYR1P21817 5038 aa5.64□□□□□ -1.51
SYVN1-204ENST00000449943 LPAP08519 4548 aa5.64□□□□□ -1.51
SYVN1-204ENST00000449943 H3BS24 57 aa5.63□□□□□ -1.51
SYVN1-204ENST00000449943 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
SYVN1-204ENST00000449943 KIAA1109Q2LD37 5005 aa5.62□□□□□ -1.51
SYVN1-204ENST00000449943 RYR3Q15413 4870 aa5.62□□□□□ -1.51
SYVN1-204ENST00000449943 C10orf95Q9H7T3 257 aa5.61□□□□□ -1.51
SYVN1-204ENST00000449943 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
SYVN1-204ENST00000449943 LRP2P98164 4655 aa5.57□□□□□ -1.52
SYVN1-204ENST00000449943 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
SYVN1-204ENST00000449943 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
SYVN1-204ENST00000449943 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
SYVN1-204ENST00000449943 EPPK1P58107 5090 aaKnown RBP5.44□□□□□ -1.54
SYVN1-204ENST00000449943 KRTAP4-5Q9BYR2 181 aa5.41□□□□□ -1.54
SYVN1-204ENST00000449943 TNP1P09430 55 aa5.34□□□□□ -1.55
SYVN1-204ENST00000449943 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
SYVN1-204ENST00000449943 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
SYVN1-204ENST00000449943 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
SYVN1-204ENST00000449943 KRTAP4-1Q9BYQ7 146 aa5.29□□□□□ -1.56
SYVN1-204ENST00000449943 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
SYVN1-204ENST00000449943 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
SYVN1-204ENST00000449943 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
SYVN1-204ENST00000449943 MUC2Q02817 5179 aa5.15□□□□□ -1.58
SYVN1-204ENST00000449943 HERC2O95714 4834 aa5.14□□□□□ -1.59
SYVN1-204ENST00000449943 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
SYVN1-204ENST00000449943 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
SYVN1-204ENST00000449943 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
SYVN1-204ENST00000449943 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
SYVN1-204ENST00000449943 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
SYVN1-204ENST00000449943 HERC1Q15751 4861 aa4.93□□□□□ -1.62
SYVN1-204ENST00000449943 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
SYVN1-204ENST00000449943 HMCN2Q8NDA2 5059 aa4.84□□□□□ -1.63
SYVN1-204ENST00000449943 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
SYVN1-204ENST00000449943 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
SYVN1-204ENST00000449943 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
SYVN1-204ENST00000449943 RNF213Q63HN8 5207 aa4.74□□□□□ -1.65
SYVN1-204ENST00000449943 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.65
SYVN1-204ENST00000449943 MT1HP80294 61 aa4.71□□□□□ -1.66
SYVN1-204ENST00000449943 UBR4Q5T4S7 5183 aa4.7□□□□□ -1.66
SYVN1-204ENST00000449943 MT1FP04733 61 aa4.68□□□□□ -1.66
SYVN1-204ENST00000449943 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
SYVN1-204ENST00000449943 MT2AP02795 61 aa4.66□□□□□ -1.66
SYVN1-204ENST00000449943 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
SYVN1-204ENST00000449943 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
SYVN1-204ENST00000449943 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.68
SYVN1-204ENST00000449943 KRTAP19-8Q3LI54 63 aa4.51□□□□□ -1.69
SYVN1-204ENST00000449943 MT1BP07438 61 aa4.5□□□□□ -1.69
SYVN1-204ENST00000449943 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
SYVN1-204ENST00000449943 MT1XP80297 61 aa4.49□□□□□ -1.69
SYVN1-204ENST00000449943 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
SYVN1-204ENST00000449943 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
SYVN1-204ENST00000449943 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
SYVN1-204ENST00000449943 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.7
SYVN1-204ENST00000449943 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
SYVN1-204ENST00000449943 USH2AO75445 5202 aa4.28□□□□□ -1.72
SYVN1-204ENST00000449943 KMT2DO14686 5537 aa4.24□□□□□ -1.73
SYVN1-204ENST00000449943 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
SYVN1-204ENST00000449943 LCE2BO14633 110 aa4.23□□□□□ -1.73
SYVN1-204ENST00000449943 INE1O15225 51 aa4.23□□□□□ -1.73
SYVN1-204ENST00000449943 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
SYVN1-204ENST00000449943 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
SYVN1-204ENST00000449943 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
SYVN1-204ENST00000449943 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
SYVN1-204ENST00000449943 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
SYVN1-204ENST00000449943 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
SYVN1-204ENST00000449943 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
SYVN1-204ENST00000449943 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
SYVN1-204ENST00000449943 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
SYVN1-204ENST00000449943 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
SYVN1-204ENST00000449943 FSIP2Q5CZC0 6907 aa3.92□□□□□ -1.78
SYVN1-204ENST00000449943 MT1LQ93083 61 aa3.89□□□□□ -1.79
SYVN1-204ENST00000449943 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
SYVN1-204ENST00000449943 MT1EP04732 61 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms