RNA–Protein interactions for RNA: ENST00000449224.1

CRTAP-202, Transcript of cartilage associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRTAP, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-202ENST00000449224 Q1T7F1 81 aa12.3□□□□□ -0.44
CRTAP-202ENST00000449224 RNF213Q63HN8 5207 aa12.3□□□□□ -0.44
CRTAP-202ENST00000449224 S4R3F8 94 aa12.23□□□□□ -0.45
CRTAP-202ENST00000449224 V9GYY9 64 aa12.21□□□□□ -0.46
CRTAP-202ENST00000449224 LCA10Q71F78 164 aa12.2□□□□□ -0.46
CRTAP-202ENST00000449224 LCE2CQ5TA81 110 aa12.14□□□□□ -0.47
CRTAP-202ENST00000449224 KRTAP3-3Q9BYR6 98 aa12.14□□□□□ -0.47
CRTAP-202ENST00000449224 SPTSSBQ8NFR3 76 aa12.09□□□□□ -0.47
CRTAP-202ENST00000449224 PSPHP1O15172 72 aa12□□□□□ -0.49
CRTAP-202ENST00000449224 PRO0628Q9UI54 55 aa11.99□□□□□ -0.49
CRTAP-202ENST00000449224 CSAG1Q6PB30 78 aa11.98□□□□□ -0.49
CRTAP-202ENST00000449224 Q5VV11 94 aa11.94□□□□□ -0.5
CRTAP-202ENST00000449224 BRK1Q8WUW1 75 aa11.94□□□□□ -0.5
CRTAP-202ENST00000449224 LINC01558Q9Y6Z2 57 aa11.94□□□□□ -0.5
CRTAP-202ENST00000449224 FAT4Q6V0I7 4981 aa11.92□□□□□ -0.5
CRTAP-202ENST00000449224 MT1HP80294 61 aa11.92□□□□□ -0.5
CRTAP-202ENST00000449224 FLGP20930 4061 aaPredicted RBP11.91□□□□□ -0.5
CRTAP-202ENST00000449224 PRR15LQ9BU68 103 aa11.9□□□□□ -0.5
CRTAP-202ENST00000449224 M0R2T5 61 aa11.81□□□□□ -0.52
CRTAP-202ENST00000449224 A0A1B0GU69 56 aa11.75□□□□□ -0.53
CRTAP-202ENST00000449224 SEC61GP60059 68 aa11.73□□□□□ -0.53
CRTAP-202ENST00000449224 H0YAA0 97 aa11.68□□□□□ -0.54
CRTAP-202ENST00000449224 ADM2Q7Z4H4 148 aa11.68□□□□□ -0.54
CRTAP-202ENST00000449224 KRTAP3-2Q9BYR7 98 aa11.65□□□□□ -0.55
CRTAP-202ENST00000449224 A6NED7 52 aa11.64□□□□□ -0.55
CRTAP-202ENST00000449224 KRTAP10-6P60371 365 aaPredicted RBP11.62□□□□□ -0.55
CRTAP-202ENST00000449224 P0C880 135 aa11.58□□□□□ -0.56
CRTAP-202ENST00000449224 LCE2AQ5TA79 106 aaPredicted RBP11.58□□□□□ -0.56
CRTAP-202ENST00000449224 CDC42SE1Q9NRR8 79 aa11.56□□□□□ -0.56
CRTAP-202ENST00000449224 A8MU10 97 aa11.53□□□□□ -0.56
CRTAP-202ENST00000449224 A0A1B0GU33 70 aa11.45□□□□□ -0.58
CRTAP-202ENST00000449224 KRTAP9-8Q9BYQ0 159 aa11.45□□□□□ -0.58
CRTAP-202ENST00000449224 LORP23490 312 aaPredicted RBP11.44□□□□□ -0.58
CRTAP-202ENST00000449224 MT2AP02795 61 aa11.4□□□□□ -0.58
CRTAP-202ENST00000449224 UQCR11O14957 56 aa11.35□□□□□ -0.59
CRTAP-202ENST00000449224 MT1FP04733 61 aa11.33□□□□□ -0.6
CRTAP-202ENST00000449224 KRTAP10-10P60014 251 aa11.3□□□□□ -0.6
CRTAP-202ENST00000449224 PMAIP1Q13794 54 aa11.29□□□□□ -0.6
CRTAP-202ENST00000449224 SPATA8Q6RVD6 105 aa11.29□□□□□ -0.6
CRTAP-202ENST00000449224 KRTAP13-4Q3LI77 160 aa11.28□□□□□ -0.6
CRTAP-202ENST00000449224 R4GN34 69 aa11.28□□□□□ -0.6
CRTAP-202ENST00000449224 M0QZ58 72 aa11.25□□□□□ -0.61
CRTAP-202ENST00000449224 CRIPTQ9P021 101 aa11.25□□□□□ -0.61
CRTAP-202ENST00000449224 MIR22HGQ0VDD5 57 aa11.22□□□□□ -0.61
CRTAP-202ENST00000449224 A6NN06 94 aa11.2□□□□□ -0.62
CRTAP-202ENST00000449224 A0A0D9SG42 100 aa11.07□□□□□ -0.64
CRTAP-202ENST00000449224 LINC01554Q52M75 96 aa11.07□□□□□ -0.64
CRTAP-202ENST00000449224 SPRR2GQ9BYE4 73 aa11.07□□□□□ -0.64
CRTAP-202ENST00000449224 KRTAP19-1Q8IUB9 90 aa11.06□□□□□ -0.64
CRTAP-202ENST00000449224 KRTAP9-3Q9BYQ3 159 aa11.04□□□□□ -0.64
CRTAP-202ENST00000449224 KTN1-AS1Q86SY8 53 aa11.02□□□□□ -0.64
CRTAP-202ENST00000449224 KRTAP12-1P59990 96 aa10.84□□□□□ -0.67
CRTAP-202ENST00000449224 SPINT4Q6UDR6 99 aa10.82□□□□□ -0.68
CRTAP-202ENST00000449224 KRTAP12-2P59991 146 aa10.81□□□□□ -0.68
CRTAP-202ENST00000449224 KRTAP19-8Q3LI54 63 aa10.8□□□□□ -0.68
CRTAP-202ENST00000449224 LCE2BO14633 110 aa10.77□□□□□ -0.68
CRTAP-202ENST00000449224 K7ERS5 55 aa10.73□□□□□ -0.69
CRTAP-202ENST00000449224 MT1BP07438 61 aa10.68□□□□□ -0.7
CRTAP-202ENST00000449224 PLAC4Q8WY50 150 aa10.67□□□□□ -0.7
CRTAP-202ENST00000449224 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
CRTAP-202ENST00000449224 CAMK2N1Q7Z7J9 78 aa10.54□□□□□ -0.72
CRTAP-202ENST00000449224 PRAC1Q96KF2 57 aa10.54□□□□□ -0.72
CRTAP-202ENST00000449224 USH2AO75445 5202 aa10.43□□□□□ -0.74
CRTAP-202ENST00000449224 MT1XP80297 61 aa10.29□□□□□ -0.76
CRTAP-202ENST00000449224 KRTAP9-2Q9BYQ4 174 aa10.28□□□□□ -0.76
CRTAP-202ENST00000449224 KRTAP10-5P60370 271 aa10.28□□□□□ -0.76
CRTAP-202ENST00000449224 ROMO1P60602 79 aa10.27□□□□□ -0.77
CRTAP-202ENST00000449224 C10orf95Q9H7T3 257 aa10.27□□□□□ -0.77
CRTAP-202ENST00000449224 PRO2289Q9P1D8 64 aa10.21□□□□□ -0.78
CRTAP-202ENST00000449224 FSIP2Q5CZC0 6907 aa10.17□□□□□ -0.78
CRTAP-202ENST00000449224 KRTAP25-1Q3LHN0 102 aa10.17□□□□□ -0.78
CRTAP-202ENST00000449224 KRTAP19-6Q3LI70 58 aa10.14□□□□□ -0.79
CRTAP-202ENST00000449224 SSPOA2VEC9 5147 aa10.12□□□□□ -0.79
CRTAP-202ENST00000449224 TNP1P09430 55 aa9.99□□□□□ -0.81
CRTAP-202ENST00000449224 CRCT1Q9UGL9 99 aa9.89□□□□□ -0.83
CRTAP-202ENST00000449224 KRTAP10-7P60409 375 aaPredicted RBP9.88□□□□□ -0.83
CRTAP-202ENST00000449224 KRTAP10-12P60413 245 aa9.75□□□□□ -0.85
CRTAP-202ENST00000449224 FCGBPQ9Y6R7 5405 aaPredicted RBP9.74□□□□□ -0.85
CRTAP-202ENST00000449224 LCE3AQ5TA76 89 aa9.61□□□□□ -0.87
CRTAP-202ENST00000449224 KRTAP23-1A1A580 65 aa9.59□□□□□ -0.87
CRTAP-202ENST00000449224 PP632Q6XCG6 107 aa9.56□□□□□ -0.88
CRTAP-202ENST00000449224 KRTAP4-8A0A0G2JLE6 195 aa9.55□□□□□ -0.88
CRTAP-202ENST00000449224 KRTAP9-6A0A140TA67 174 aa9.55□□□□□ -0.88
CRTAP-202ENST00000449224 KRTAP4-8Q9BYQ9 185 aa9.55□□□□□ -0.88
CRTAP-202ENST00000449224 KMT2DO14686 5537 aa9.45□□□□□ -0.9
CRTAP-202ENST00000449224 KRTAP8-1Q8IUC2 63 aa9.39□□□□□ -0.91
CRTAP-202ENST00000449224 MACF1Q9UPN3 7388 aaKnown RBP9.32□□□□□ -0.92
CRTAP-202ENST00000449224 KRTAP19-5Q3LI72 72 aa9.26□□□□□ -0.93
CRTAP-202ENST00000449224 KRTAP12-3P60328 96 aa9.22□□□□□ -0.93
CRTAP-202ENST00000449224 KRTAP19-7Q3SYF9 63 aa9.19□□□□□ -0.94
CRTAP-202ENST00000449224 KRTAP15-1Q3LI76 137 aa9.17□□□□□ -0.94
CRTAP-202ENST00000449224 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.17□□□□□ -0.94
CRTAP-202ENST00000449224 SYNE2Q8WXH0 6885 aaKnown RBP9.05□□□□□ -0.96
CRTAP-202ENST00000449224 MT1EP04732 61 aa9.04□□□□□ -0.96
CRTAP-202ENST00000449224 SPRR2FQ96RM1 72 aa9.01□□□□□ -0.97
CRTAP-202ENST00000449224 KRTAP5-9P26371 169 aa8.96□□□□□ -0.98
CRTAP-202ENST00000449224 KRTAP6-3Q3LI67 103 aa8.89□□□□□ -0.99
CRTAP-202ENST00000449224 MT1LQ93083 61 aa8.83□□□□□ -1
CRTAP-202ENST00000449224 MUC12Q9UKN1 5478 aa8.78□□□□□ -1
CRTAP-202ENST00000449224 KRTAP19-3Q7Z4W3 81 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms