RNA–Protein interactions for RNA: ENST00000448535.1

AC009963.4-201, humanhuman

BASIC

Gene AC009963.4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009963.4-201ENST00000448535 COL6A5A8TX70 2615 aa2.95□□□□□ -1.94
AC009963.4-201ENST00000448535 TRRAPQ9Y4A5 3859 aa2.95□□□□□ -1.94
AC009963.4-201ENST00000448535 SRRM2Q9UQ35 2752 aaKnown RBP2.95□□□□□ -1.94
AC009963.4-201ENST00000448535 CUBNO60494 3623 aa2.94□□□□□ -1.94
AC009963.4-201ENST00000448535 KRTAP10-10P60014 251 aa2.94□□□□□ -1.94
AC009963.4-201ENST00000448535 BAHCC1Q9P281 2608 aa2.94□□□□□ -1.94
AC009963.4-201ENST00000448535 FLNAP21333 2647 aaKnown RBP2.93□□□□□ -1.94
AC009963.4-201ENST00000448535 ABCA12Q86UK0 2595 aa2.93□□□□□ -1.94
AC009963.4-201ENST00000448535 SETD2Q9BYW2 2564 aaPredicted RBP2.93□□□□□ -1.94
AC009963.4-201ENST00000448535 VWFP04275 2813 aa2.92□□□□□ -1.94
AC009963.4-201ENST00000448535 FRAS1Q86XX4 4008 aa2.92□□□□□ -1.94
AC009963.4-201ENST00000448535 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
AC009963.4-201ENST00000448535 DNAH3Q8TD57 4116 aa2.92□□□□□ -1.94
AC009963.4-201ENST00000448535 DNAH8Q96JB1 4490 aa2.92□□□□□ -1.94
AC009963.4-201ENST00000448535 SMR3AQ99954 134 aa2.91□□□□□ -1.94
AC009963.4-201ENST00000448535 NIPBLQ6KC79 2804 aaeCLIP2.9□□□□□ -1.94
AC009963.4-201ENST00000448535 ZFHX2Q9C0A1 2572 aaPredicted RBP2.9□□□□□ -1.94
AC009963.4-201ENST00000448535 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
AC009963.4-201ENST00000448535 TGP01266 2768 aa2.89□□□□□ -1.95
AC009963.4-201ENST00000448535 DNAH9Q9NYC9 4486 aa2.87□□□□□ -1.95
AC009963.4-201ENST00000448535 PKD1L1Q8TDX9 2849 aa2.87□□□□□ -1.95
AC009963.4-201ENST00000448535 KRTAP10-1P60331 282 aa2.87□□□□□ -1.95
AC009963.4-201ENST00000448535 PRKDCP78527 4128 aaKnown RBP2.87□□□□□ -1.95
AC009963.4-201ENST00000448535 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
AC009963.4-201ENST00000448535 DNAH10Q8IVF4 4471 aa2.86□□□□□ -1.95
AC009963.4-201ENST00000448535 FASNP49327 2511 aaKnown RBP2.86□□□□□ -1.95
AC009963.4-201ENST00000448535 POLQO75417 2590 aa2.86□□□□□ -1.95
AC009963.4-201ENST00000448535 CSMD3Q7Z407 3707 aa2.86□□□□□ -1.95
AC009963.4-201ENST00000448535 DNAH7Q8WXX0 4024 aa2.86□□□□□ -1.95
AC009963.4-201ENST00000448535 TENM3Q9P273 2699 aa2.86□□□□□ -1.95
AC009963.4-201ENST00000448535 PDZD2O15018 2839 aa2.85□□□□□ -1.95
AC009963.4-201ENST00000448535 NBEAL1Q6ZS30 2694 aa2.84□□□□□ -1.95
AC009963.4-201ENST00000448535 ACANP16112 2415 aa2.83□□□□□ -1.96
AC009963.4-201ENST00000448535 FAM208BQ5VWN6 2430 aa2.83□□□□□ -1.96
AC009963.4-201ENST00000448535 LYSTQ99698 3801 aa2.83□□□□□ -1.96
AC009963.4-201ENST00000448535 R4GN34 69 aa2.83□□□□□ -1.96
AC009963.4-201ENST00000448535 CMYA5Q8N3K9 4069 aa2.82□□□□□ -1.96
AC009963.4-201ENST00000448535 MAST4O15021 2626 aa2.82□□□□□ -1.96
AC009963.4-201ENST00000448535 TEP1Q99973 2627 aaKnown RBP2.82□□□□□ -1.96
AC009963.4-201ENST00000448535 DNAH17Q9UFH2 4485 aa2.82□□□□□ -1.96
AC009963.4-201ENST00000448535 CACNA1AO00555 2505 aa2.81□□□□□ -1.96
AC009963.4-201ENST00000448535 ZNF469Q96JG9 3925 aaPredicted RBP2.8□□□□□ -1.96
AC009963.4-201ENST00000448535 J3QKU1 62 aa2.8□□□□□ -1.96
AC009963.4-201ENST00000448535 Q5VSD8 79 aa2.8□□□□□ -1.96
AC009963.4-201ENST00000448535 FLNCQ14315 2725 aa2.8□□□□□ -1.96
AC009963.4-201ENST00000448535 MYO18BQ8IUG5 2567 aa2.8□□□□□ -1.96
AC009963.4-201ENST00000448535 DNAH6Q9C0G6 4158 aa2.79□□□□□ -1.96
AC009963.4-201ENST00000448535 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
AC009963.4-201ENST00000448535 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
AC009963.4-201ENST00000448535 ITPR2Q14571 2701 aa2.78□□□□□ -1.96
AC009963.4-201ENST00000448535 HUWE1Q7Z6Z7 4374 aaKnown RBP2.78□□□□□ -1.96
AC009963.4-201ENST00000448535 STAB2Q8WWQ8 2551 aa2.77□□□□□ -1.97
AC009963.4-201ENST00000448535 IGSF10Q6WRI0 2623 aa2.75□□□□□ -1.97
AC009963.4-201ENST00000448535 HECTD4Q9Y4D8 3996 aa2.75□□□□□ -1.97
AC009963.4-201ENST00000448535 COL7A1Q02388 2944 aa2.75□□□□□ -1.97
AC009963.4-201ENST00000448535 DNAH11Q96DT5 4516 aa2.74□□□□□ -1.97
AC009963.4-201ENST00000448535 DNAH2Q9P225 4427 aa2.73□□□□□ -1.97
AC009963.4-201ENST00000448535 TNP1P09430 55 aa2.73□□□□□ -1.97
AC009963.4-201ENST00000448535 FLNBO75369 2602 aaKnown RBP2.73□□□□□ -1.97
AC009963.4-201ENST00000448535 USP24Q9UPU5 2620 aa2.72□□□□□ -1.97
AC009963.4-201ENST00000448535 NSD1Q96L73 2696 aaPredicted RBP2.71□□□□□ -1.98
AC009963.4-201ENST00000448535 ATRQ13535 2644 aa2.71□□□□□ -1.98
AC009963.4-201ENST00000448535 SACSQ9NZJ4 4579 aa2.7□□□□□ -1.98
AC009963.4-201ENST00000448535 TENM1Q9UKZ4 2725 aa2.7□□□□□ -1.98
AC009963.4-201ENST00000448535 FBN3Q75N90 2809 aa2.69□□□□□ -1.98
AC009963.4-201ENST00000448535 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
AC009963.4-201ENST00000448535 MGAM2Q2M2H8 2515 aa2.69□□□□□ -1.98
AC009963.4-201ENST00000448535 KMT2AQ03164 3969 aa2.68□□□□□ -1.98
AC009963.4-201ENST00000448535 NOTCH1P46531 2555 aa2.68□□□□□ -1.98
AC009963.4-201ENST00000448535 DMBT1Q9UGM3 2413 aaPredicted RBP2.67□□□□□ -1.98
AC009963.4-201ENST00000448535 PLECQ15149 4684 aaKnown RBP2.63□□□□□ -1.99
AC009963.4-201ENST00000448535 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
AC009963.4-201ENST00000448535 STAB1Q9NY15 2570 aa2.6□□□□□ -1.99
AC009963.4-201ENST00000448535 PKHD1L1Q86WI1 4243 aa2.59□□□□□ -1.99
AC009963.4-201ENST00000448535 DNAH5Q8TE73 4624 aa2.59□□□□□ -2
AC009963.4-201ENST00000448535 PKHD1P08F94 4074 aa2.57□□□□□ -2
AC009963.4-201ENST00000448535 KRTAP10-4P60372 401 aaPredicted RBP2.56□□□□□ -2
AC009963.4-201ENST00000448535 LRP1Q07954 4544 aaKnown RBP2.54□□□□□ -2
AC009963.4-201ENST00000448535 STARD9Q9P2P6 4700 aa2.53□□□□□ -2
AC009963.4-201ENST00000448535 VPS13BQ7Z7G8 4022 aa2.52□□□□□ -2.01
AC009963.4-201ENST00000448535 TNXBP22105 4242 aa2.51□□□□□ -2.01
AC009963.4-201ENST00000448535 APOBP04114 4563 aaKnown RBP2.5□□□□□ -2.01
AC009963.4-201ENST00000448535 LRP1BQ9NZR2 4599 aa2.5□□□□□ -2.01
AC009963.4-201ENST00000448535 PKD1P98161 4303 aa2.5□□□□□ -2.01
AC009963.4-201ENST00000448535 DYNC1H1Q14204 4646 aaKnown RBP2.48□□□□□ -2.01
AC009963.4-201ENST00000448535 SMR3BP02814 79 aaPredicted RBP2.48□□□□□ -2.01
AC009963.4-201ENST00000448535 FAT2Q9NYQ8 4349 aa2.47□□□□□ -2.01
AC009963.4-201ENST00000448535 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
AC009963.4-201ENST00000448535 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
AC009963.4-201ENST00000448535 HSPG2P98160 4391 aa2.45□□□□□ -2.02
AC009963.4-201ENST00000448535 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
AC009963.4-201ENST00000448535 KRTAP8-1Q8IUC2 63 aa2.43□□□□□ -2.02
AC009963.4-201ENST00000448535 FAT1Q14517 4588 aa2.41□□□□□ -2.02
AC009963.4-201ENST00000448535 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
AC009963.4-201ENST00000448535 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
AC009963.4-201ENST00000448535 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
AC009963.4-201ENST00000448535 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
AC009963.4-201ENST00000448535 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
AC009963.4-201ENST00000448535 SPRR2GQ9BYE4 73 aa2.29□□□□□ -2.04
AC009963.4-201ENST00000448535 DNHD1Q96M86 4753 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms