RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 SACSQ9NZJ4 4579 aa8.14□□□□□ -1.11
CHRD-205ENST00000448472 DYNC1H1Q14204 4646 aaKnown RBP8.13□□□□□ -1.11
CHRD-205ENST00000448472 P0C880 135 aa8.12□□□□□ -1.11
CHRD-205ENST00000448472 KRTAP10-6P60371 365 aaPredicted RBP8.12□□□□□ -1.11
CHRD-205ENST00000448472 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
CHRD-205ENST00000448472 KRTAP10-4P60372 401 aaPredicted RBP8.07□□□□□ -1.12
CHRD-205ENST00000448472 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
CHRD-205ENST00000448472 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
CHRD-205ENST00000448472 TPRXLQ17RH7 258 aa8.05□□□□□ -1.12
CHRD-205ENST00000448472 XP32Q5T750 250 aa8.02□□□□□ -1.13
CHRD-205ENST00000448472 A0A1B0GVY2 172 aa8.02□□□□□ -1.13
CHRD-205ENST00000448472 Q5VSD8 79 aa8.02□□□□□ -1.13
CHRD-205ENST00000448472 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
CHRD-205ENST00000448472 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
CHRD-205ENST00000448472 KRTAP12-2P59991 146 aa7.96□□□□□ -1.13
CHRD-205ENST00000448472 RYR3Q15413 4870 aa7.93□□□□□ -1.14
CHRD-205ENST00000448472 NDUFAF8A1L188 74 aa7.92□□□□□ -1.14
CHRD-205ENST00000448472 KIAA1109Q2LD37 5005 aa7.91□□□□□ -1.14
CHRD-205ENST00000448472 RYR2Q92736 4967 aa7.91□□□□□ -1.14
CHRD-205ENST00000448472 APOBP04114 4563 aaKnown RBP7.9□□□□□ -1.15
CHRD-205ENST00000448472 HSPG2P98160 4391 aa7.84□□□□□ -1.15
CHRD-205ENST00000448472 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
CHRD-205ENST00000448472 M0QZ58 72 aa7.81□□□□□ -1.16
CHRD-205ENST00000448472 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
CHRD-205ENST00000448472 PKHD1L1Q86WI1 4243 aa7.77□□□□□ -1.16
CHRD-205ENST00000448472 R4GN34 69 aa7.77□□□□□ -1.17
CHRD-205ENST00000448472 EPPK1P58107 5090 aaKnown RBP7.74□□□□□ -1.17
CHRD-205ENST00000448472 RYR1P21817 5038 aa7.68□□□□□ -1.18
CHRD-205ENST00000448472 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
CHRD-205ENST00000448472 KRTAP17-1Q9BYP8 105 aa7.65□□□□□ -1.19
CHRD-205ENST00000448472 LRP2P98164 4655 aa7.62□□□□□ -1.19
CHRD-205ENST00000448472 LPAP08519 4548 aa7.59□□□□□ -1.19
CHRD-205ENST00000448472 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
CHRD-205ENST00000448472 TNXBP22105 4242 aa7.59□□□□□ -1.2
CHRD-205ENST00000448472 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
CHRD-205ENST00000448472 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.21
CHRD-205ENST00000448472 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
CHRD-205ENST00000448472 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
CHRD-205ENST00000448472 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
CHRD-205ENST00000448472 J3QL48 77 aa7.39□□□□□ -1.23
CHRD-205ENST00000448472 LUZP6Q538Z0 58 aa7.36□□□□□ -1.23
CHRD-205ENST00000448472 ABCA13Q86UQ4 5058 aa7.35□□□□□ -1.23
CHRD-205ENST00000448472 HERC2O95714 4834 aa7.33□□□□□ -1.24
CHRD-205ENST00000448472 KRTAP4-1Q9BYQ7 146 aa7.2□□□□□ -1.26
CHRD-205ENST00000448472 MUC2Q02817 5179 aa7.16□□□□□ -1.26
CHRD-205ENST00000448472 HERC1Q15751 4861 aa7.15□□□□□ -1.26
CHRD-205ENST00000448472 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
CHRD-205ENST00000448472 TNP1P09430 55 aa7.07□□□□□ -1.28
CHRD-205ENST00000448472 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
CHRD-205ENST00000448472 PCLOQ9Y6V0 5065 aa7.06□□□□□ -1.28
CHRD-205ENST00000448472 BIRC6Q9NR09 4857 aa7.05□□□□□ -1.28
CHRD-205ENST00000448472 RNF213Q63HN8 5207 aa6.97□□□□□ -1.29
CHRD-205ENST00000448472 M0R2T5 61 aa6.93□□□□□ -1.3
CHRD-205ENST00000448472 MUC17Q685J3 4493 aa6.92□□□□□ -1.3
CHRD-205ENST00000448472 UBR4Q5T4S7 5183 aa6.84□□□□□ -1.31
CHRD-205ENST00000448472 FAT4Q6V0I7 4981 aa6.82□□□□□ -1.32
CHRD-205ENST00000448472 KRTAP19-2Q3LHN2 52 aa6.81□□□□□ -1.32
CHRD-205ENST00000448472 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
CHRD-205ENST00000448472 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
CHRD-205ENST00000448472 HMCN2Q8NDA2 5059 aa6.63□□□□□ -1.35
CHRD-205ENST00000448472 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
CHRD-205ENST00000448472 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
CHRD-205ENST00000448472 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
CHRD-205ENST00000448472 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
CHRD-205ENST00000448472 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
CHRD-205ENST00000448472 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
CHRD-205ENST00000448472 MT1FP04733 61 aa6.37□□□□□ -1.39
CHRD-205ENST00000448472 MT1HP80294 61 aa6.36□□□□□ -1.39
CHRD-205ENST00000448472 MT2AP02795 61 aa6.34□□□□□ -1.39
CHRD-205ENST00000448472 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
CHRD-205ENST00000448472 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
CHRD-205ENST00000448472 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
CHRD-205ENST00000448472 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
CHRD-205ENST00000448472 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
CHRD-205ENST00000448472 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
CHRD-205ENST00000448472 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
CHRD-205ENST00000448472 MT1XP80297 61 aa6.15□□□□□ -1.43
CHRD-205ENST00000448472 MT1BP07438 61 aa6.12□□□□□ -1.43
CHRD-205ENST00000448472 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
CHRD-205ENST00000448472 USH2AO75445 5202 aa6.11□□□□□ -1.43
CHRD-205ENST00000448472 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
CHRD-205ENST00000448472 INE1O15225 51 aa6.08□□□□□ -1.44
CHRD-205ENST00000448472 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
CHRD-205ENST00000448472 KMT2DO14686 5537 aa5.91□□□□□ -1.46
CHRD-205ENST00000448472 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
CHRD-205ENST00000448472 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
CHRD-205ENST00000448472 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
CHRD-205ENST00000448472 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
CHRD-205ENST00000448472 LCE2BO14633 110 aa5.7□□□□□ -1.5
CHRD-205ENST00000448472 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
CHRD-205ENST00000448472 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
CHRD-205ENST00000448472 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
CHRD-205ENST00000448472 SSPOA2VEC9 5147 aa5.45□□□□□ -1.54
CHRD-205ENST00000448472 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
CHRD-205ENST00000448472 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
CHRD-205ENST00000448472 MT1LQ93083 61 aa5.35□□□□□ -1.55
CHRD-205ENST00000448472 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
CHRD-205ENST00000448472 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
CHRD-205ENST00000448472 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
CHRD-205ENST00000448472 MT1EP04732 61 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms