RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 DNAH9Q9NYC9 4486 aa2.57□□□□□ -2
PRKD3-204ENST00000443977 C7orf65Q6ZTY9 151 aa2.56□□□□□ -2
PRKD3-204ENST00000443977 ANK2Q01484 3957 aa2.55□□□□□ -2
PRKD3-204ENST00000443977 DYNC2H1Q8NCM8 4307 aaKnown RBP2.55□□□□□ -2
PRKD3-204ENST00000443977 UQCR11O14957 56 aa2.55□□□□□ -2
PRKD3-204ENST00000443977 TENM2Q9NT68 2774 aa2.55□□□□□ -2
PRKD3-204ENST00000443977 A6NN06 94 aa2.54□□□□□ -2
PRKD3-204ENST00000443977 SPINK7P58062 85 aa2.54□□□□□ -2
PRKD3-204ENST00000443977 KRTAP13-2Q52LG2 175 aa2.54□□□□□ -2
PRKD3-204ENST00000443977 KRTAP16-1A8MUX0 517 aa2.53□□□□□ -2
PRKD3-204ENST00000443977 KRTAP10-1P60331 282 aa2.53□□□□□ -2
PRKD3-204ENST00000443977 LINC00304Q8N9R0 145 aa2.53□□□□□ -2
PRKD3-204ENST00000443977 RETNLBQ9BQ08 111 aa2.53□□□□□ -2
PRKD3-204ENST00000443977 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
PRKD3-204ENST00000443977 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
PRKD3-204ENST00000443977 VPS13DQ5THJ4 4388 aa2.52□□□□□ -2.01
PRKD3-204ENST00000443977 SRRM2Q9UQ35 2752 aaKnown RBP2.51□□□□□ -2.01
PRKD3-204ENST00000443977 DNAH10Q8IVF4 4471 aa2.51□□□□□ -2.01
PRKD3-204ENST00000443977 A8MU10 97 aa2.51□□□□□ -2.01
PRKD3-204ENST00000443977 KRTAP1-4P0C5Y4 121 aa2.51□□□□□ -2.01
PRKD3-204ENST00000443977 DNAH17Q9UFH2 4485 aa2.5□□□□□ -2.01
PRKD3-204ENST00000443977 RBM12B-AS1Q9P1G2 102 aa2.49□□□□□ -2.01
PRKD3-204ENST00000443977 COL7A1Q02388 2944 aa2.49□□□□□ -2.01
PRKD3-204ENST00000443977 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
PRKD3-204ENST00000443977 PLECQ15149 4684 aaKnown RBP2.47□□□□□ -2.01
PRKD3-204ENST00000443977 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.01
PRKD3-204ENST00000443977 FAT4Q6V0I7 4981 aa2.46□□□□□ -2.02
PRKD3-204ENST00000443977 A8MUU9 505 aa2.46□□□□□ -2.02
PRKD3-204ENST00000443977 K7ERS5 55 aa2.46□□□□□ -2.02
PRKD3-204ENST00000443977 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
PRKD3-204ENST00000443977 PRKDCP78527 4128 aaKnown RBP2.46□□□□□ -2.02
PRKD3-204ENST00000443977 A0A1B0GVY2 172 aa2.45□□□□□ -2.02
PRKD3-204ENST00000443977 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
PRKD3-204ENST00000443977 ALMS1Q8TCU4 4167 aa2.44□□□□□ -2.02
PRKD3-204ENST00000443977 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
PRKD3-204ENST00000443977 DNAH6Q9C0G6 4158 aa2.44□□□□□ -2.02
PRKD3-204ENST00000443977 DNAH2Q9P225 4427 aa2.43□□□□□ -2.02
PRKD3-204ENST00000443977 A0A1B0GU33 70 aa2.43□□□□□ -2.02
PRKD3-204ENST00000443977 CSMD3Q7Z407 3707 aa2.43□□□□□ -2.02
PRKD3-204ENST00000443977 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
PRKD3-204ENST00000443977 C9orf92A6NGG3 77 aa2.42□□□□□ -2.02
PRKD3-204ENST00000443977 LYSTQ99698 3801 aa2.41□□□□□ -2.02
PRKD3-204ENST00000443977 SMR3BP02814 79 aaPredicted RBP2.41□□□□□ -2.02
PRKD3-204ENST00000443977 COX6B2Q6YFQ2 88 aa2.41□□□□□ -2.02
PRKD3-204ENST00000443977 FSIP2Q5CZC0 6907 aa2.4□□□□□ -2.02
PRKD3-204ENST00000443977 HECTD4Q9Y4D8 3996 aa2.4□□□□□ -2.02
PRKD3-204ENST00000443977 H1FX-AS1Q4G0G2 97 aa2.4□□□□□ -2.03
PRKD3-204ENST00000443977 LINC01554Q52M75 96 aa2.4□□□□□ -2.03
PRKD3-204ENST00000443977 STARD9Q9P2P6 4700 aa2.4□□□□□ -2.03
PRKD3-204ENST00000443977 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
PRKD3-204ENST00000443977 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
PRKD3-204ENST00000443977 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
PRKD3-204ENST00000443977 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
PRKD3-204ENST00000443977 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
PRKD3-204ENST00000443977 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
PRKD3-204ENST00000443977 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
PRKD3-204ENST00000443977 DNAH5Q8TE73 4624 aa2.35□□□□□ -2.03
PRKD3-204ENST00000443977 H0YAA0 97 aa2.35□□□□□ -2.03
PRKD3-204ENST00000443977 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
PRKD3-204ENST00000443977 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
PRKD3-204ENST00000443977 FRAS1Q86XX4 4008 aa2.35□□□□□ -2.03
PRKD3-204ENST00000443977 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
PRKD3-204ENST00000443977 KRTAP10-8P60410 259 aa2.34□□□□□ -2.03
PRKD3-204ENST00000443977 RPL37P61927 97 aaKnown RBP2.34□□□□□ -2.03
PRKD3-204ENST00000443977 LRP1BQ9NZR2 4599 aa2.33□□□□□ -2.04
PRKD3-204ENST00000443977 SACSQ9NZJ4 4579 aa2.32□□□□□ -2.04
PRKD3-204ENST00000443977 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
PRKD3-204ENST00000443977 S4R3F8 94 aa2.32□□□□□ -2.04
PRKD3-204ENST00000443977 PKD1P98161 4303 aa2.31□□□□□ -2.04
PRKD3-204ENST00000443977 FLG2Q5D862 2391 aaPredicted RBP2.31□□□□□ -2.04
PRKD3-204ENST00000443977 ROMO1P60602 79 aa2.31□□□□□ -2.04
PRKD3-204ENST00000443977 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
PRKD3-204ENST00000443977 Q5VSD8 79 aa2.3□□□□□ -2.04
PRKD3-204ENST00000443977 FAT2Q9NYQ8 4349 aa2.3□□□□□ -2.04
PRKD3-204ENST00000443977 DMBT1Q9UGM3 2413 aaPredicted RBP2.28□□□□□ -2.04
PRKD3-204ENST00000443977 CRCT1Q9UGL9 99 aa2.28□□□□□ -2.04
PRKD3-204ENST00000443977 HMCN2Q8NDA2 5059 aa2.27□□□□□ -2.05
PRKD3-204ENST00000443977 M0QZ58 72 aa2.27□□□□□ -2.05
PRKD3-204ENST00000443977 CRIPTQ9P021 101 aa2.27□□□□□ -2.05
PRKD3-204ENST00000443977 NEBP20929 6669 aa2.26□□□□□ -2.05
PRKD3-204ENST00000443977 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
PRKD3-204ENST00000443977 A0A0D9SG42 100 aa2.25□□□□□ -2.05
PRKD3-204ENST00000443977 TPRXLQ17RH7 258 aa2.25□□□□□ -2.05
PRKD3-204ENST00000443977 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
PRKD3-204ENST00000443977 DYNC1H1Q14204 4646 aaKnown RBP2.22□□□□□ -2.05
PRKD3-204ENST00000443977 SPINT4Q6UDR6 99 aa2.21□□□□□ -2.06
PRKD3-204ENST00000443977 SSPOA2VEC9 5147 aa2.2□□□□□ -2.06
PRKD3-204ENST00000443977 P0C880 135 aa2.2□□□□□ -2.06
PRKD3-204ENST00000443977 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
PRKD3-204ENST00000443977 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
PRKD3-204ENST00000443977 MT1HL1P0DM35 61 aa2.19□□□□□ -2.06
PRKD3-204ENST00000443977 FAT1Q14517 4588 aa2.19□□□□□ -2.06
PRKD3-204ENST00000443977 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
PRKD3-204ENST00000443977 KRTAP12-2P59991 146 aa2.18□□□□□ -2.06
PRKD3-204ENST00000443977 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
PRKD3-204ENST00000443977 R4GN34 69 aa2.17□□□□□ -2.06
PRKD3-204ENST00000443977 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
PRKD3-204ENST00000443977 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
PRKD3-204ENST00000443977 TNXBP22105 4242 aa2.15□□□□□ -2.07
PRKD3-204ENST00000443977 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms