RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 A8MUU9 505 aa4.6□□□□□ -1.67
USP6NL-203ENST00000443016 K7ERS5 55 aa4.58□□□□□ -1.68
USP6NL-203ENST00000443016 COX7CP15954 63 aa4.58□□□□□ -1.68
USP6NL-203ENST00000443016 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
USP6NL-203ENST00000443016 Q8N9P0 234 aaPredicted RBP4.57□□□□□ -1.68
USP6NL-203ENST00000443016 CYSTM1Q9H1C7 97 aa4.57□□□□□ -1.68
USP6NL-203ENST00000443016 TP53AIP1Q9HCN2 124 aa4.56□□□□□ -1.68
USP6NL-203ENST00000443016 KRTAP10-6P60371 365 aaPredicted RBP4.55□□□□□ -1.68
USP6NL-203ENST00000443016 ATOX1O00244 68 aa4.54□□□□□ -1.68
USP6NL-203ENST00000443016 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
USP6NL-203ENST00000443016 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
USP6NL-203ENST00000443016 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
USP6NL-203ENST00000443016 ROMO1P60602 79 aa4.5□□□□□ -1.69
USP6NL-203ENST00000443016 TRAV22A0A0B4J277 110 aa4.5□□□□□ -1.69
USP6NL-203ENST00000443016 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
USP6NL-203ENST00000443016 H0Y9P7 68 aa4.47□□□□□ -1.69
USP6NL-203ENST00000443016 SERP2Q8N6R1 65 aa4.46□□□□□ -1.7
USP6NL-203ENST00000443016 H3BPC8 53 aa4.45□□□□□ -1.7
USP6NL-203ENST00000443016 Q5W150 140 aa4.45□□□□□ -1.7
USP6NL-203ENST00000443016 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
USP6NL-203ENST00000443016 P0C880 135 aa4.43□□□□□ -1.7
USP6NL-203ENST00000443016 IGKV2D-30A0A075B6S6 120 aa4.43□□□□□ -1.7
USP6NL-203ENST00000443016 IGKV2-30P06310 120 aa4.43□□□□□ -1.7
USP6NL-203ENST00000443016 A8MU10 97 aa4.41□□□□□ -1.7
USP6NL-203ENST00000443016 LINC00208Q96KT6 92 aa4.41□□□□□ -1.7
USP6NL-203ENST00000443016 SPINK7P58062 85 aa4.4□□□□□ -1.71
USP6NL-203ENST00000443016 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
USP6NL-203ENST00000443016 SPTSSBQ8NFR3 76 aa4.39□□□□□ -1.71
USP6NL-203ENST00000443016 HRES1P13985 223 aa4.38□□□□□ -1.71
USP6NL-203ENST00000443016 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
USP6NL-203ENST00000443016 CYP4F30PQ9H0H9 118 aa4.37□□□□□ -1.71
USP6NL-203ENST00000443016 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
USP6NL-203ENST00000443016 KLKP1Q107X0 134 aa4.35□□□□□ -1.71
USP6NL-203ENST00000443016 SNURFQ9Y675 71 aa4.35□□□□□ -1.71
USP6NL-203ENST00000443016 SPANXA2-OT1Q8N9U9 137 aa4.34□□□□□ -1.72
USP6NL-203ENST00000443016 USH2AO75445 5202 aa4.34□□□□□ -1.72
USP6NL-203ENST00000443016 NDUFC1O43677 76 aa4.33□□□□□ -1.72
USP6NL-203ENST00000443016 Q1T7F1 81 aa4.33□□□□□ -1.72
USP6NL-203ENST00000443016 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
USP6NL-203ENST00000443016 MT2AP02795 61 aa4.31□□□□□ -1.72
USP6NL-203ENST00000443016 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
USP6NL-203ENST00000443016 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
USP6NL-203ENST00000443016 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
USP6NL-203ENST00000443016 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
USP6NL-203ENST00000443016 MT1FP04733 61 aa4.28□□□□□ -1.72
USP6NL-203ENST00000443016 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
USP6NL-203ENST00000443016 H7BZZ5 65 aa4.27□□□□□ -1.73
USP6NL-203ENST00000443016 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
USP6NL-203ENST00000443016 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
USP6NL-203ENST00000443016 KRTAP9-3Q9BYQ3 159 aa4.22□□□□□ -1.73
USP6NL-203ENST00000443016 A0A1B0GU33 70 aa4.21□□□□□ -1.73
USP6NL-203ENST00000443016 ACYP2P14621 99 aa4.2□□□□□ -1.74
USP6NL-203ENST00000443016 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
USP6NL-203ENST00000443016 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
USP6NL-203ENST00000443016 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
USP6NL-203ENST00000443016 S4R3F8 94 aa4.18□□□□□ -1.74
USP6NL-203ENST00000443016 Q5VV11 94 aa4.17□□□□□ -1.74
USP6NL-203ENST00000443016 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
USP6NL-203ENST00000443016 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
USP6NL-203ENST00000443016 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
USP6NL-203ENST00000443016 CHKB-CPT1BH3BT56 60 aa4.16□□□□□ -1.74
USP6NL-203ENST00000443016 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
USP6NL-203ENST00000443016 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
USP6NL-203ENST00000443016 R4GN34 69 aa4.13□□□□□ -1.75
USP6NL-203ENST00000443016 COA5Q86WW8 74 aa4.12□□□□□ -1.75
USP6NL-203ENST00000443016 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
USP6NL-203ENST00000443016 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
USP6NL-203ENST00000443016 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
USP6NL-203ENST00000443016 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
USP6NL-203ENST00000443016 H0YAA0 97 aa3.99□□□□□ -1.77
USP6NL-203ENST00000443016 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
USP6NL-203ENST00000443016 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
USP6NL-203ENST00000443016 PRR15LQ9BU68 103 aa3.94□□□□□ -1.78
USP6NL-203ENST00000443016 A0A1B0GU69 56 aa3.93□□□□□ -1.78
USP6NL-203ENST00000443016 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
USP6NL-203ENST00000443016 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
USP6NL-203ENST00000443016 LINC01558Q9Y6Z2 57 aa3.91□□□□□ -1.78
USP6NL-203ENST00000443016 MT1BP07438 61 aa3.9□□□□□ -1.79
USP6NL-203ENST00000443016 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.79
USP6NL-203ENST00000443016 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
USP6NL-203ENST00000443016 KRTAP19-8Q3LI54 63 aa3.89□□□□□ -1.79
USP6NL-203ENST00000443016 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
USP6NL-203ENST00000443016 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
USP6NL-203ENST00000443016 M0QZ58 72 aa3.83□□□□□ -1.8
USP6NL-203ENST00000443016 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
USP6NL-203ENST00000443016 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
USP6NL-203ENST00000443016 UQCR11O14957 56 aa3.79□□□□□ -1.8
USP6NL-203ENST00000443016 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
USP6NL-203ENST00000443016 NEBP20929 6669 aa3.76□□□□□ -1.81
USP6NL-203ENST00000443016 KMT2DO14686 5537 aa3.74□□□□□ -1.81
USP6NL-203ENST00000443016 SPATA8Q6RVD6 105 aa3.73□□□□□ -1.81
USP6NL-203ENST00000443016 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
USP6NL-203ENST00000443016 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
USP6NL-203ENST00000443016 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
USP6NL-203ENST00000443016 A0A0D9SG42 100 aa3.7□□□□□ -1.82
USP6NL-203ENST00000443016 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
USP6NL-203ENST00000443016 MT1XP80297 61 aa3.66□□□□□ -1.82
USP6NL-203ENST00000443016 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
USP6NL-203ENST00000443016 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
USP6NL-203ENST00000443016 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms