RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SMIM20Q8N5G0 67 aa7.56□□□□□ -1.2
USP39-205ENST00000442708 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
USP39-205ENST00000442708 KRTAP9-3Q9BYQ3 159 aa7.54□□□□□ -1.2
USP39-205ENST00000442708 CSAG1Q6PB30 78 aa7.49□□□□□ -1.21
USP39-205ENST00000442708 A8MUN3 132 aa7.48□□□□□ -1.21
USP39-205ENST00000442708 LCE2BO14633 110 aa7.46□□□□□ -1.22
USP39-205ENST00000442708 USH2AO75445 5202 aa7.44□□□□□ -1.22
USP39-205ENST00000442708 SERP2Q8N6R1 65 aa7.44□□□□□ -1.22
USP39-205ENST00000442708 SNURFQ9Y675 71 aa7.43□□□□□ -1.22
USP39-205ENST00000442708 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
USP39-205ENST00000442708 C20orf197Q8N268 126 aa7.39□□□□□ -1.23
USP39-205ENST00000442708 NDUFC1O43677 76 aa7.38□□□□□ -1.23
USP39-205ENST00000442708 SSPOA2VEC9 5147 aa7.33□□□□□ -1.24
USP39-205ENST00000442708 COX7CP15954 63 aa7.3□□□□□ -1.24
USP39-205ENST00000442708 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
USP39-205ENST00000442708 ACYP2P14621 99 aa7.27□□□□□ -1.25
USP39-205ENST00000442708 H0YAA0 97 aa7.26□□□□□ -1.25
USP39-205ENST00000442708 FCGBPQ9Y6R7 5405 aaPredicted RBP7.25□□□□□ -1.25
USP39-205ENST00000442708 SPANXA2-OT1Q8N9U9 137 aa7.24□□□□□ -1.25
USP39-205ENST00000442708 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
USP39-205ENST00000442708 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
USP39-205ENST00000442708 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.26
USP39-205ENST00000442708 ANAPC13Q9BS18 74 aa7.19□□□□□ -1.26
USP39-205ENST00000442708 H7BZZ5 65 aa7.15□□□□□ -1.26
USP39-205ENST00000442708 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
USP39-205ENST00000442708 P0C880 135 aa7.13□□□□□ -1.27
USP39-205ENST00000442708 KRTAP19-8Q3LI54 63 aa7.13□□□□□ -1.27
USP39-205ENST00000442708 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
USP39-205ENST00000442708 MT1BP07438 61 aa7.12□□□□□ -1.27
USP39-205ENST00000442708 CHKB-CPT1BH3BT56 60 aa7.11□□□□□ -1.27
USP39-205ENST00000442708 KRTAP19-6Q3LI70 58 aa7.1□□□□□ -1.27
USP39-205ENST00000442708 CCDC179H3BU77 68 aa7.09□□□□□ -1.27
USP39-205ENST00000442708 SPTSSBQ8NFR3 76 aa7.08□□□□□ -1.28
USP39-205ENST00000442708 Q5VV11 94 aa7.06□□□□□ -1.28
USP39-205ENST00000442708 COA5Q86WW8 74 aa7.05□□□□□ -1.28
USP39-205ENST00000442708 MACF1Q9UPN3 7388 aaKnown RBP7.04□□□□□ -1.28
USP39-205ENST00000442708 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
USP39-205ENST00000442708 R4GN34 69 aa6.97□□□□□ -1.29
USP39-205ENST00000442708 M0QZ58 72 aa6.95□□□□□ -1.3
USP39-205ENST00000442708 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
USP39-205ENST00000442708 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
USP39-205ENST00000442708 A6NN06 94 aa6.85□□□□□ -1.31
USP39-205ENST00000442708 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
USP39-205ENST00000442708 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
USP39-205ENST00000442708 KRTAP13-4Q3LI77 160 aa6.81□□□□□ -1.32
USP39-205ENST00000442708 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
USP39-205ENST00000442708 TMEM258P61165 79 aa6.77□□□□□ -1.33
USP39-205ENST00000442708 MT1XP80297 61 aa6.75□□□□□ -1.33
USP39-205ENST00000442708 SEC61GP60059 68 aa6.73□□□□□ -1.33
USP39-205ENST00000442708 SERP1Q9Y6X1 66 aa6.73□□□□□ -1.33
USP39-205ENST00000442708 KRTAP20-1Q3LI63 56 aa6.7□□□□□ -1.34
USP39-205ENST00000442708 A0A1B0GU33 70 aa6.66□□□□□ -1.34
USP39-205ENST00000442708 A0A1B0GU69 56 aa6.65□□□□□ -1.34
USP39-205ENST00000442708 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.34
USP39-205ENST00000442708 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
USP39-205ENST00000442708 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
USP39-205ENST00000442708 A0A0D9SG42 100 aa6.57□□□□□ -1.36
USP39-205ENST00000442708 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
USP39-205ENST00000442708 NEBP20929 6669 aa6.55□□□□□ -1.36
USP39-205ENST00000442708 PCP4P48539 62 aa6.52□□□□□ -1.37
USP39-205ENST00000442708 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
USP39-205ENST00000442708 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
USP39-205ENST00000442708 A8MU10 97 aa6.47□□□□□ -1.37
USP39-205ENST00000442708 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
USP39-205ENST00000442708 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
USP39-205ENST00000442708 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
USP39-205ENST00000442708 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
USP39-205ENST00000442708 SMIM26A0A096LP01 95 aa6.42□□□□□ -1.38
USP39-205ENST00000442708 KMT2DO14686 5537 aa6.42□□□□□ -1.38
USP39-205ENST00000442708 KRTAP5-9P26371 169 aa6.4□□□□□ -1.38
USP39-205ENST00000442708 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
USP39-205ENST00000442708 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
USP39-205ENST00000442708 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
USP39-205ENST00000442708 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
USP39-205ENST00000442708 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
USP39-205ENST00000442708 Q1T7F1 81 aa6.34□□□□□ -1.39
USP39-205ENST00000442708 UQCR11O14957 56 aa6.32□□□□□ -1.4
USP39-205ENST00000442708 PSPHP1O15172 72 aa6.31□□□□□ -1.4
USP39-205ENST00000442708 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
USP39-205ENST00000442708 V9GYY9 64 aa6.3□□□□□ -1.4
USP39-205ENST00000442708 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
USP39-205ENST00000442708 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
USP39-205ENST00000442708 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
USP39-205ENST00000442708 MIR22HGQ0VDD5 57 aa6.22□□□□□ -1.41
USP39-205ENST00000442708 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
USP39-205ENST00000442708 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
USP39-205ENST00000442708 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
USP39-205ENST00000442708 SPRR2EP22531 72 aa6.09□□□□□ -1.43
USP39-205ENST00000442708 SPRR2BP35325 72 aa6.09□□□□□ -1.43
USP39-205ENST00000442708 SPRR2AP35326 72 aa6.09□□□□□ -1.43
USP39-205ENST00000442708 A6NED7 52 aa6.07□□□□□ -1.44
USP39-205ENST00000442708 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
USP39-205ENST00000442708 KRTAP19-7Q3SYF9 63 aa6.03□□□□□ -1.44
USP39-205ENST00000442708 TNP1P09430 55 aa6.02□□□□□ -1.45
USP39-205ENST00000442708 K7ERS5 55 aa5.97□□□□□ -1.45
USP39-205ENST00000442708 LCE3AQ5TA76 89 aa5.96□□□□□ -1.46
USP39-205ENST00000442708 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
USP39-205ENST00000442708 MT1EP04732 61 aa5.94□□□□□ -1.46
USP39-205ENST00000442708 SPRR2DP22532 72 aa5.88□□□□□ -1.47
USP39-205ENST00000442708 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms