RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SNURFQ9Y675 71 aa6.17□□□□□ -1.42
AC009404.1-202ENST00000439955 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
AC009404.1-202ENST00000439955 PCOTHQ58A44 107 aa6.15□□□□□ -1.42
AC009404.1-202ENST00000439955 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
AC009404.1-202ENST00000439955 MT1HP80294 61 aa6.13□□□□□ -1.43
AC009404.1-202ENST00000439955 SPINK7P58062 85 aa6.12□□□□□ -1.43
AC009404.1-202ENST00000439955 CYSTM1Q9H1C7 97 aa6.11□□□□□ -1.43
AC009404.1-202ENST00000439955 H7BZZ5 65 aa6.1□□□□□ -1.43
AC009404.1-202ENST00000439955 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
AC009404.1-202ENST00000439955 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
AC009404.1-202ENST00000439955 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
AC009404.1-202ENST00000439955 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
AC009404.1-202ENST00000439955 TMEM258P61165 79 aa6.05□□□□□ -1.44
AC009404.1-202ENST00000439955 HRES1P13985 223 aa6.04□□□□□ -1.44
AC009404.1-202ENST00000439955 ATP5EP56381 51 aaPredicted RBP6.03□□□□□ -1.44
AC009404.1-202ENST00000439955 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
AC009404.1-202ENST00000439955 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
AC009404.1-202ENST00000439955 M0R2T5 61 aa6□□□□□ -1.45
AC009404.1-202ENST00000439955 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
AC009404.1-202ENST00000439955 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
AC009404.1-202ENST00000439955 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
AC009404.1-202ENST00000439955 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
AC009404.1-202ENST00000439955 USH2AO75445 5202 aa5.98□□□□□ -1.45
AC009404.1-202ENST00000439955 A8MUN3 132 aa5.97□□□□□ -1.45
AC009404.1-202ENST00000439955 C4orf26Q17RF5 130 aa5.97□□□□□ -1.45
AC009404.1-202ENST00000439955 COX6B2Q6YFQ2 88 aa5.97□□□□□ -1.45
AC009404.1-202ENST00000439955 MPLKIPQ8TAP9 179 aa5.97□□□□□ -1.45
AC009404.1-202ENST00000439955 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
AC009404.1-202ENST00000439955 RBM12B-AS1Q9P1G2 102 aa5.95□□□□□ -1.46
AC009404.1-202ENST00000439955 ACYP2P14621 99 aa5.91□□□□□ -1.46
AC009404.1-202ENST00000439955 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.46
AC009404.1-202ENST00000439955 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
AC009404.1-202ENST00000439955 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
AC009404.1-202ENST00000439955 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
AC009404.1-202ENST00000439955 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
AC009404.1-202ENST00000439955 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
AC009404.1-202ENST00000439955 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
AC009404.1-202ENST00000439955 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
AC009404.1-202ENST00000439955 COA5Q86WW8 74 aa5.83□□□□□ -1.48
AC009404.1-202ENST00000439955 RPS28P62857 69 aaKnown RBP5.8□□□□□ -1.48
AC009404.1-202ENST00000439955 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
AC009404.1-202ENST00000439955 S4R3F8 94 aa5.78□□□□□ -1.48
AC009404.1-202ENST00000439955 SPTSSBQ8NFR3 76 aa5.76□□□□□ -1.49
AC009404.1-202ENST00000439955 LCA10Q71F78 164 aa5.74□□□□□ -1.49
AC009404.1-202ENST00000439955 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
AC009404.1-202ENST00000439955 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
AC009404.1-202ENST00000439955 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
AC009404.1-202ENST00000439955 V9GYY9 64 aa5.63□□□□□ -1.51
AC009404.1-202ENST00000439955 Q1T7F1 81 aa5.61□□□□□ -1.51
AC009404.1-202ENST00000439955 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
AC009404.1-202ENST00000439955 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
AC009404.1-202ENST00000439955 MT2AP02795 61 aa5.59□□□□□ -1.51
AC009404.1-202ENST00000439955 H0YAA0 97 aa5.58□□□□□ -1.52
AC009404.1-202ENST00000439955 MT1FP04733 61 aa5.55□□□□□ -1.52
AC009404.1-202ENST00000439955 SEC61GP60059 68 aa5.55□□□□□ -1.52
AC009404.1-202ENST00000439955 NEBP20929 6669 aa5.54□□□□□ -1.52
AC009404.1-202ENST00000439955 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
AC009404.1-202ENST00000439955 PRR15LQ9BU68 103 aa5.54□□□□□ -1.52
AC009404.1-202ENST00000439955 A0A1B0GU69 56 aa5.53□□□□□ -1.52
AC009404.1-202ENST00000439955 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
AC009404.1-202ENST00000439955 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
AC009404.1-202ENST00000439955 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
AC009404.1-202ENST00000439955 ADM2Q7Z4H4 148 aa5.48□□□□□ -1.53
AC009404.1-202ENST00000439955 PSPHP1O15172 72 aa5.44□□□□□ -1.54
AC009404.1-202ENST00000439955 P0C880 135 aa5.43□□□□□ -1.54
AC009404.1-202ENST00000439955 Q5VV11 94 aa5.43□□□□□ -1.54
AC009404.1-202ENST00000439955 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
AC009404.1-202ENST00000439955 A0A1B0GU33 70 aa5.39□□□□□ -1.55
AC009404.1-202ENST00000439955 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
AC009404.1-202ENST00000439955 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
AC009404.1-202ENST00000439955 M0QZ58 72 aa5.36□□□□□ -1.55
AC009404.1-202ENST00000439955 UQCR11O14957 56 aa5.36□□□□□ -1.55
AC009404.1-202ENST00000439955 R4GN34 69 aa5.32□□□□□ -1.56
AC009404.1-202ENST00000439955 A6NED7 52 aa5.31□□□□□ -1.56
AC009404.1-202ENST00000439955 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
AC009404.1-202ENST00000439955 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
AC009404.1-202ENST00000439955 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
AC009404.1-202ENST00000439955 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
AC009404.1-202ENST00000439955 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
AC009404.1-202ENST00000439955 A6NN06 94 aa5.19□□□□□ -1.58
AC009404.1-202ENST00000439955 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
AC009404.1-202ENST00000439955 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
AC009404.1-202ENST00000439955 A8MU10 97 aa5.16□□□□□ -1.58
AC009404.1-202ENST00000439955 LINC01554Q52M75 96 aa5.16□□□□□ -1.58
AC009404.1-202ENST00000439955 BRK1Q8WUW1 75 aa5.16□□□□□ -1.58
AC009404.1-202ENST00000439955 A0A0D9SG42 100 aa5.15□□□□□ -1.59
AC009404.1-202ENST00000439955 KMT2DO14686 5537 aa5.14□□□□□ -1.59
AC009404.1-202ENST00000439955 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
AC009404.1-202ENST00000439955 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
AC009404.1-202ENST00000439955 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
AC009404.1-202ENST00000439955 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
AC009404.1-202ENST00000439955 K7ERS5 55 aa5.09□□□□□ -1.59
AC009404.1-202ENST00000439955 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
AC009404.1-202ENST00000439955 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
AC009404.1-202ENST00000439955 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
AC009404.1-202ENST00000439955 MT1BP07438 61 aa5.04□□□□□ -1.6
AC009404.1-202ENST00000439955 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
AC009404.1-202ENST00000439955 PRO0628Q9UI54 55 aa5.03□□□□□ -1.6
AC009404.1-202ENST00000439955 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.62
AC009404.1-202ENST00000439955 GPR98Q8WXG9 6306 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms