RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 LINC00846Q9NV44 126 aa4.15□□□□□ -1.75
HERPUD2-206ENST00000438224 CASC2Q6XLA1 102 aa4.12□□□□□ -1.75
HERPUD2-206ENST00000438224 KRTAP10-10P60014 251 aa4.11□□□□□ -1.75
HERPUD2-206ENST00000438224 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
HERPUD2-206ENST00000438224 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
HERPUD2-206ENST00000438224 MT3P25713 68 aa4.09□□□□□ -1.75
HERPUD2-206ENST00000438224 ETDBQ3ZM63 59 aa4.09□□□□□ -1.75
HERPUD2-206ENST00000438224 UBL5Q9BZL1 73 aa4.09□□□□□ -1.75
HERPUD2-206ENST00000438224 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
HERPUD2-206ENST00000438224 C7orf65Q6ZTY9 151 aa4.07□□□□□ -1.76
HERPUD2-206ENST00000438224 GTF2H5Q6ZYL4 71 aa4.07□□□□□ -1.76
HERPUD2-206ENST00000438224 F8W1H4 67 aa4.06□□□□□ -1.76
HERPUD2-206ENST00000438224 H1FX-AS1Q4G0G2 97 aa4.06□□□□□ -1.76
HERPUD2-206ENST00000438224 USH2AO75445 5202 aa4.06□□□□□ -1.76
HERPUD2-206ENST00000438224 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
HERPUD2-206ENST00000438224 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
HERPUD2-206ENST00000438224 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
HERPUD2-206ENST00000438224 TP53AIP1Q9HCN2 124 aa3.96□□□□□ -1.78
HERPUD2-206ENST00000438224 K7ERS5 55 aa3.95□□□□□ -1.78
HERPUD2-206ENST00000438224 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
HERPUD2-206ENST00000438224 C1orf64Q8NEQ6 169 aa3.94□□□□□ -1.78
HERPUD2-206ENST00000438224 A0A1B0GV90 55 aa3.93□□□□□ -1.78
HERPUD2-206ENST00000438224 ACYP1P07311 99 aa3.93□□□□□ -1.78
HERPUD2-206ENST00000438224 LCA10Q71F78 164 aa3.93□□□□□ -1.78
HERPUD2-206ENST00000438224 SPANXA2-OT1Q8N9U9 137 aa3.93□□□□□ -1.78
HERPUD2-206ENST00000438224 CYP4F30PQ9H0H9 118 aa3.93□□□□□ -1.78
HERPUD2-206ENST00000438224 A0A087WVE0 104 aa3.92□□□□□ -1.78
HERPUD2-206ENST00000438224 S4R3F8 94 aa3.92□□□□□ -1.78
HERPUD2-206ENST00000438224 TRAV22A0A0B4J277 110 aa3.91□□□□□ -1.78
HERPUD2-206ENST00000438224 ATP5EP2Q5VTU8 51 aa3.9□□□□□ -1.79
HERPUD2-206ENST00000438224 HIST1H4AP62805 103 aaKnown RBP3.89□□□□□ -1.79
HERPUD2-206ENST00000438224 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
HERPUD2-206ENST00000438224 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
HERPUD2-206ENST00000438224 LOC101927531A0A1B0GV80 90 aa3.87□□□□□ -1.79
HERPUD2-206ENST00000438224 CSAG1Q6PB30 78 aa3.87□□□□□ -1.79
HERPUD2-206ENST00000438224 H0Y9P7 68 aa3.86□□□□□ -1.79
HERPUD2-206ENST00000438224 UQCRQO14949 82 aa3.86□□□□□ -1.79
HERPUD2-206ENST00000438224 LINC00643Q86TS7 51 aa3.86□□□□□ -1.79
HERPUD2-206ENST00000438224 SMIM20Q8N5G0 67 aa3.86□□□□□ -1.79
HERPUD2-206ENST00000438224 FAM236AA0A1B0GUQ0 79 aa3.85□□□□□ -1.79
HERPUD2-206ENST00000438224 FAM236BA0A1B0GV22 79 aa3.85□□□□□ -1.79
HERPUD2-206ENST00000438224 MT1BP07438 61 aa3.85□□□□□ -1.79
HERPUD2-206ENST00000438224 A6NED7 52 aa3.84□□□□□ -1.79
HERPUD2-206ENST00000438224 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
HERPUD2-206ENST00000438224 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
HERPUD2-206ENST00000438224 ADM2Q7Z4H4 148 aa3.83□□□□□ -1.8
HERPUD2-206ENST00000438224 KLKP1Q107X0 134 aa3.82□□□□□ -1.8
HERPUD2-206ENST00000438224 A8MUN3 132 aa3.81□□□□□ -1.8
HERPUD2-206ENST00000438224 ATOX1O00244 68 aa3.81□□□□□ -1.8
HERPUD2-206ENST00000438224 LINC00208Q96KT6 92 aa3.8□□□□□ -1.8
HERPUD2-206ENST00000438224 Q5VV11 94 aa3.77□□□□□ -1.81
HERPUD2-206ENST00000438224 NDUFC1O43677 76 aa3.74□□□□□ -1.81
HERPUD2-206ENST00000438224 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
HERPUD2-206ENST00000438224 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
HERPUD2-206ENST00000438224 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
HERPUD2-206ENST00000438224 A6NN06 94 aa3.73□□□□□ -1.81
HERPUD2-206ENST00000438224 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
HERPUD2-206ENST00000438224 H0YAA0 97 aa3.72□□□□□ -1.81
HERPUD2-206ENST00000438224 J3QR89 54 aa3.72□□□□□ -1.81
HERPUD2-206ENST00000438224 IMUPQ9GZP8 106 aa3.72□□□□□ -1.81
HERPUD2-206ENST00000438224 CRIPTQ9P021 101 aa3.71□□□□□ -1.82
HERPUD2-206ENST00000438224 H3BPC8 53 aa3.69□□□□□ -1.82
HERPUD2-206ENST00000438224 MT-ATP8P03928 68 aa3.69□□□□□ -1.82
HERPUD2-206ENST00000438224 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
HERPUD2-206ENST00000438224 NEBP20929 6669 aa3.68□□□□□ -1.82
HERPUD2-206ENST00000438224 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
HERPUD2-206ENST00000438224 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
HERPUD2-206ENST00000438224 SPINT4Q6UDR6 99 aa3.68□□□□□ -1.82
HERPUD2-206ENST00000438224 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
HERPUD2-206ENST00000438224 P0C880 135 aa3.67□□□□□ -1.82
HERPUD2-206ENST00000438224 SCGB1A1P11684 91 aa3.67□□□□□ -1.82
HERPUD2-206ENST00000438224 A8MU10 97 aa3.63□□□□□ -1.83
HERPUD2-206ENST00000438224 K7ERU9 68 aa3.62□□□□□ -1.83
HERPUD2-206ENST00000438224 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
HERPUD2-206ENST00000438224 TRAV7A0A075B6U4 112 aa3.61□□□□□ -1.83
HERPUD2-206ENST00000438224 A0A1B0GU33 70 aa3.61□□□□□ -1.83
HERPUD2-206ENST00000438224 MT1XP80297 61 aa3.61□□□□□ -1.83
HERPUD2-206ENST00000438224 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
HERPUD2-206ENST00000438224 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
HERPUD2-206ENST00000438224 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
HERPUD2-206ENST00000438224 M0QZ58 72 aa3.57□□□□□ -1.84
HERPUD2-206ENST00000438224 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
HERPUD2-206ENST00000438224 SNURFQ9Y675 71 aa3.57□□□□□ -1.84
HERPUD2-206ENST00000438224 R4GN34 69 aa3.57□□□□□ -1.84
HERPUD2-206ENST00000438224 ACYP2P14621 99 aa3.55□□□□□ -1.84
HERPUD2-206ENST00000438224 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
HERPUD2-206ENST00000438224 LINC01554Q52M75 96 aa3.54□□□□□ -1.84
HERPUD2-206ENST00000438224 RPS28P62857 69 aaKnown RBP3.53□□□□□ -1.84
HERPUD2-206ENST00000438224 PLAC4Q8WY50 150 aa3.53□□□□□ -1.84
HERPUD2-206ENST00000438224 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
HERPUD2-206ENST00000438224 SERP2Q8N6R1 65 aa3.5□□□□□ -1.85
HERPUD2-206ENST00000438224 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
HERPUD2-206ENST00000438224 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
HERPUD2-206ENST00000438224 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
HERPUD2-206ENST00000438224 KMT2DO14686 5537 aa3.48□□□□□ -1.85
HERPUD2-206ENST00000438224 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
HERPUD2-206ENST00000438224 CHKB-CPT1BH3BT56 60 aa3.47□□□□□ -1.85
HERPUD2-206ENST00000438224 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
HERPUD2-206ENST00000438224 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
HERPUD2-206ENST00000438224 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms