RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 A8MUN3 132 aa8.1□□□□□ -1.11
CALD1-209ENST00000436461 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
CALD1-209ENST00000436461 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
CALD1-209ENST00000436461 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
CALD1-209ENST00000436461 H7BZZ5 65 aa8.03□□□□□ -1.12
CALD1-209ENST00000436461 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.13
CALD1-209ENST00000436461 TMEM258P61165 79 aa8□□□□□ -1.13
CALD1-209ENST00000436461 KRTAP9-8Q9BYQ0 159 aa8□□□□□ -1.13
CALD1-209ENST00000436461 NDUFC1O43677 76 aa8□□□□□ -1.13
CALD1-209ENST00000436461 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
CALD1-209ENST00000436461 ACYP2P14621 99 aa7.97□□□□□ -1.13
CALD1-209ENST00000436461 CSAG1Q6PB30 78 aa7.96□□□□□ -1.13
CALD1-209ENST00000436461 MT2AP02795 61 aa7.94□□□□□ -1.14
CALD1-209ENST00000436461 MT1FP04733 61 aa7.9□□□□□ -1.14
CALD1-209ENST00000436461 CHKB-CPT1BH3BT56 60 aa7.85□□□□□ -1.15
CALD1-209ENST00000436461 KRTAP10-10P60014 251 aa7.85□□□□□ -1.15
CALD1-209ENST00000436461 COA5Q86WW8 74 aa7.83□□□□□ -1.16
CALD1-209ENST00000436461 PRO0628Q9UI54 55 aa7.75□□□□□ -1.17
CALD1-209ENST00000436461 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
CALD1-209ENST00000436461 ADM2Q7Z4H4 148 aa7.73□□□□□ -1.17
CALD1-209ENST00000436461 SPTSSBQ8NFR3 76 aa7.73□□□□□ -1.17
CALD1-209ENST00000436461 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
CALD1-209ENST00000436461 KRTAP9-3Q9BYQ3 159 aa7.72□□□□□ -1.17
CALD1-209ENST00000436461 H0YAA0 97 aa7.7□□□□□ -1.18
CALD1-209ENST00000436461 KRTAP9-2Q9BYQ4 174 aa7.7□□□□□ -1.18
CALD1-209ENST00000436461 SMIM26A0A096LP01 95 aa7.68□□□□□ -1.18
CALD1-209ENST00000436461 P0C880 135 aa7.65□□□□□ -1.18
CALD1-209ENST00000436461 LCE2BO14633 110 aa7.61□□□□□ -1.19
CALD1-209ENST00000436461 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
CALD1-209ENST00000436461 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
CALD1-209ENST00000436461 USH2AO75445 5202 aa7.57□□□□□ -1.2
CALD1-209ENST00000436461 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
CALD1-209ENST00000436461 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
CALD1-209ENST00000436461 R4GN34 69 aa7.46□□□□□ -1.21
CALD1-209ENST00000436461 M0QZ58 72 aa7.45□□□□□ -1.22
CALD1-209ENST00000436461 V9GYY9 64 aa7.45□□□□□ -1.22
CALD1-209ENST00000436461 SEC61GP60059 68 aa7.44□□□□□ -1.22
CALD1-209ENST00000436461 SSPOA2VEC9 5147 aa7.42□□□□□ -1.22
CALD1-209ENST00000436461 A0A1B0GU69 56 aa7.4□□□□□ -1.22
CALD1-209ENST00000436461 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
CALD1-209ENST00000436461 MT1BP07438 61 aa7.38□□□□□ -1.23
CALD1-209ENST00000436461 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
CALD1-209ENST00000436461 LINC01554Q52M75 96 aa7.36□□□□□ -1.23
CALD1-209ENST00000436461 Q1T7F1 81 aa7.35□□□□□ -1.23
CALD1-209ENST00000436461 Q5VV11 94 aa7.35□□□□□ -1.23
CALD1-209ENST00000436461 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
CALD1-209ENST00000436461 CRCT1Q9UGL9 99 aa7.34□□□□□ -1.23
CALD1-209ENST00000436461 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
CALD1-209ENST00000436461 A0A1B0GU33 70 aa7.3□□□□□ -1.24
CALD1-209ENST00000436461 SPATA8Q6RVD6 105 aa7.28□□□□□ -1.24
CALD1-209ENST00000436461 PMAIP1Q13794 54 aa7.27□□□□□ -1.25
CALD1-209ENST00000436461 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
CALD1-209ENST00000436461 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
CALD1-209ENST00000436461 KRTAP19-6Q3LI70 58 aa7.19□□□□□ -1.26
CALD1-209ENST00000436461 A0A0D9SG42 100 aa7.19□□□□□ -1.26
CALD1-209ENST00000436461 PSPHP1O15172 72 aa7.19□□□□□ -1.26
CALD1-209ENST00000436461 PLAC4Q8WY50 150 aa7.17□□□□□ -1.26
CALD1-209ENST00000436461 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
CALD1-209ENST00000436461 A8MU10 97 aa7.12□□□□□ -1.27
CALD1-209ENST00000436461 A6NN06 94 aa7.09□□□□□ -1.28
CALD1-209ENST00000436461 UQCR11O14957 56 aa7.07□□□□□ -1.28
CALD1-209ENST00000436461 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
CALD1-209ENST00000436461 MT1XP80297 61 aa7.04□□□□□ -1.28
CALD1-209ENST00000436461 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
CALD1-209ENST00000436461 KTN1-AS1Q86SY8 53 aa7.04□□□□□ -1.28
CALD1-209ENST00000436461 KRTAP12-1P59990 96 aa7.02□□□□□ -1.29
CALD1-209ENST00000436461 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
CALD1-209ENST00000436461 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
CALD1-209ENST00000436461 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
CALD1-209ENST00000436461 PRO2289Q9P1D8 64 aa6.94□□□□□ -1.3
CALD1-209ENST00000436461 A6NED7 52 aa6.93□□□□□ -1.3
CALD1-209ENST00000436461 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
CALD1-209ENST00000436461 MACF1Q9UPN3 7388 aaKnown RBP6.92□□□□□ -1.3
CALD1-209ENST00000436461 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.83□□□□□ -1.32
CALD1-209ENST00000436461 KMT2DO14686 5537 aa6.78□□□□□ -1.32
CALD1-209ENST00000436461 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
CALD1-209ENST00000436461 KRTAP10-7P60409 375 aaPredicted RBP6.76□□□□□ -1.33
CALD1-209ENST00000436461 K7ERS5 55 aa6.68□□□□□ -1.34
CALD1-209ENST00000436461 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
CALD1-209ENST00000436461 KRTAP10-12P60413 245 aa6.65□□□□□ -1.35
CALD1-209ENST00000436461 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
CALD1-209ENST00000436461 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
CALD1-209ENST00000436461 KRTAP9-7A8MTY7 169 aa6.59□□□□□ -1.35
CALD1-209ENST00000436461 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
CALD1-209ENST00000436461 TNP1P09430 55 aa6.5□□□□□ -1.37
CALD1-209ENST00000436461 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
CALD1-209ENST00000436461 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
CALD1-209ENST00000436461 KRTAP5-9P26371 169 aa6.41□□□□□ -1.38
CALD1-209ENST00000436461 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
CALD1-209ENST00000436461 ROMO1P60602 79 aa6.38□□□□□ -1.39
CALD1-209ENST00000436461 LCE3AQ5TA76 89 aa6.38□□□□□ -1.39
CALD1-209ENST00000436461 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
CALD1-209ENST00000436461 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
CALD1-209ENST00000436461 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
CALD1-209ENST00000436461 H3BS24 57 aa6.29□□□□□ -1.4
CALD1-209ENST00000436461 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
CALD1-209ENST00000436461 KRTAP19-5Q3LI72 72 aa6.26□□□□□ -1.41
CALD1-209ENST00000436461 NEBP20929 6669 aa6.2□□□□□ -1.42
CALD1-209ENST00000436461 MT1EP04732 61 aa6.19□□□□□ -1.42
CALD1-209ENST00000436461 SPRR2EP22531 72 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms