RNA–Protein interactions for RNA: ENST00000435803.5

ABCA13-204, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCA13, Length 17,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-204ENST00000435803 ANK3Q12955 4377 aaKnown RBP2.43□□□□□ -2.02
ABCA13-204ENST00000435803 DNAH17Q9UFH2 4485 aa2.43□□□□□ -2.02
ABCA13-204ENST00000435803 SMG1Q96Q15 3661 aaKnown RBP2.42□□□□□ -2.02
ABCA13-204ENST00000435803 WDFY3Q8IZQ1 3526 aa2.42□□□□□ -2.02
ABCA13-204ENST00000435803 DNAH8Q96JB1 4490 aa2.41□□□□□ -2.02
ABCA13-204ENST00000435803 KRTAP10-6P60371 365 aaPredicted RBP2.4□□□□□ -2.03
ABCA13-204ENST00000435803 ASPMQ8IZT6 3477 aa2.39□□□□□ -2.03
ABCA13-204ENST00000435803 MUC3AQ02505 3323 aa2.34□□□□□ -2.04
ABCA13-204ENST00000435803 DNAH9Q9NYC9 4486 aa2.33□□□□□ -2.04
ABCA13-204ENST00000435803 PLECQ15149 4684 aaKnown RBP2.33□□□□□ -2.04
ABCA13-204ENST00000435803 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
ABCA13-204ENST00000435803 KRTAP3-1Q9BYR8 98 aa2.32□□□□□ -2.04
ABCA13-204ENST00000435803 RELNP78509 3460 aa2.32□□□□□ -2.04
ABCA13-204ENST00000435803 CSMD1Q96PZ7 3565 aa2.31□□□□□ -2.04
ABCA13-204ENST00000435803 PKD1P98161 4303 aa2.3□□□□□ -2.04
ABCA13-204ENST00000435803 DNAH5Q8TE73 4624 aa2.3□□□□□ -2.04
ABCA13-204ENST00000435803 DYNC1H1Q14204 4646 aaKnown RBP2.3□□□□□ -2.04
ABCA13-204ENST00000435803 CSMD3Q7Z407 3707 aa2.29□□□□□ -2.04
ABCA13-204ENST00000435803 A0A1B0GVY2 172 aa2.29□□□□□ -2.04
ABCA13-204ENST00000435803 HSPG2P98160 4391 aa2.29□□□□□ -2.04
ABCA13-204ENST00000435803 KRTAP3-2Q9BYR7 98 aa2.28□□□□□ -2.05
ABCA13-204ENST00000435803 PKHD1L1Q86WI1 4243 aa2.27□□□□□ -2.05
ABCA13-204ENST00000435803 CUBNO60494 3623 aa2.25□□□□□ -2.05
ABCA13-204ENST00000435803 LRP1Q07954 4544 aaKnown RBP2.24□□□□□ -2.05
ABCA13-204ENST00000435803 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
ABCA13-204ENST00000435803 APOBP04114 4563 aaKnown RBP2.23□□□□□ -2.05
ABCA13-204ENST00000435803 TNXBP22105 4242 aa2.23□□□□□ -2.05
ABCA13-204ENST00000435803 KRTAP10-12P60413 245 aa2.23□□□□□ -2.05
ABCA13-204ENST00000435803 FAT2Q9NYQ8 4349 aa2.22□□□□□ -2.05
ABCA13-204ENST00000435803 KRTAP3-3Q9BYR6 98 aa2.2□□□□□ -2.06
ABCA13-204ENST00000435803 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
ABCA13-204ENST00000435803 MT3P25713 68 aa2.18□□□□□ -2.06
ABCA13-204ENST00000435803 SVEP1Q4LDE5 3571 aa2.15□□□□□ -2.06
ABCA13-204ENST00000435803 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
ABCA13-204ENST00000435803 RYR1P21817 5038 aa2.11□□□□□ -2.07
ABCA13-204ENST00000435803 KRTAP4-5Q9BYR2 181 aa2.1□□□□□ -2.07
ABCA13-204ENST00000435803 CSMD2Q7Z408 3487 aa2.08□□□□□ -2.08
ABCA13-204ENST00000435803 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
ABCA13-204ENST00000435803 FAT1Q14517 4588 aa2.06□□□□□ -2.08
ABCA13-204ENST00000435803 LRP1BQ9NZR2 4599 aa2.04□□□□□ -2.08
ABCA13-204ENST00000435803 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.09
ABCA13-204ENST00000435803 LORP23490 312 aaPredicted RBP2.02□□□□□ -2.09
ABCA13-204ENST00000435803 MT1HL1P0DM35 61 aa2.02□□□□□ -2.09
ABCA13-204ENST00000435803 KRTAP8-1Q8IUC2 63 aa2.01□□□□□ -2.09
ABCA13-204ENST00000435803 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
ABCA13-204ENST00000435803 DNHD1Q96M86 4753 aa1.98□□□□□ -2.09
ABCA13-204ENST00000435803 KRTAP10-4P60372 401 aaPredicted RBP1.96□□□□□ -2.09
ABCA13-204ENST00000435803 LCE3CQ5T5A8 94 aa1.96□□□□□ -2.1
ABCA13-204ENST00000435803 STARD9Q9P2P6 4700 aa1.93□□□□□ -2.1
ABCA13-204ENST00000435803 KRTAP10-5P60370 271 aa1.92□□□□□ -2.1
ABCA13-204ENST00000435803 RYR3Q15413 4870 aa1.9□□□□□ -2.11
ABCA13-204ENST00000435803 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
ABCA13-204ENST00000435803 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
ABCA13-204ENST00000435803 RYR2Q92736 4967 aa1.84□□□□□ -2.11
ABCA13-204ENST00000435803 LRP2P98164 4655 aa1.84□□□□□ -2.11
ABCA13-204ENST00000435803 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.12
ABCA13-204ENST00000435803 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.12
ABCA13-204ENST00000435803 HYDINQ4G0P3 5121 aa1.82□□□□□ -2.12
ABCA13-204ENST00000435803 HMCN2Q8NDA2 5059 aa1.8□□□□□ -2.12
ABCA13-204ENST00000435803 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
ABCA13-204ENST00000435803 KRTAP4-1Q9BYQ7 146 aa1.8□□□□□ -2.12
ABCA13-204ENST00000435803 HERC2O95714 4834 aa1.79□□□□□ -2.12
ABCA13-204ENST00000435803 KRTAP19-5Q3LI72 72 aa1.77□□□□□ -2.13
ABCA13-204ENST00000435803 MUC17Q685J3 4493 aa1.77□□□□□ -2.13
ABCA13-204ENST00000435803 MT1GP13640 62 aa1.75□□□□□ -2.13
ABCA13-204ENST00000435803 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
ABCA13-204ENST00000435803 MT1LQ93083 61 aa1.74□□□□□ -2.13
ABCA13-204ENST00000435803 LPAP08519 4548 aa1.74□□□□□ -2.13
ABCA13-204ENST00000435803 LCE3DQ9BYE3 92 aa1.73□□□□□ -2.13
ABCA13-204ENST00000435803 KRTAP17-1Q9BYP8 105 aa1.73□□□□□ -2.13
ABCA13-204ENST00000435803 KMT2CQ8NEZ4 4911 aaKnown RBP1.72□□□□□ -2.13
ABCA13-204ENST00000435803 HERC1Q15751 4861 aa1.72□□□□□ -2.13
ABCA13-204ENST00000435803 MT1HP80294 61 aa1.71□□□□□ -2.14
ABCA13-204ENST00000435803 MT1FP04733 61 aa1.7□□□□□ -2.14
ABCA13-204ENST00000435803 PCLOQ9Y6V0 5065 aa1.7□□□□□ -2.14
ABCA13-204ENST00000435803 MT2AP02795 61 aa1.69□□□□□ -2.14
ABCA13-204ENST00000435803 MT1EP04732 61 aa1.69□□□□□ -2.14
ABCA13-204ENST00000435803 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
ABCA13-204ENST00000435803 KRTAP19-1Q8IUB9 90 aa1.66□□□□□ -2.14
ABCA13-204ENST00000435803 MT1XP80297 61 aa1.66□□□□□ -2.14
ABCA13-204ENST00000435803 SPRR2AP35326 72 aa1.65□□□□□ -2.14
ABCA13-204ENST00000435803 MT1AP04731 61 aa1.65□□□□□ -2.15
ABCA13-204ENST00000435803 KRTAP2-3P0C7H8 128 aa1.64□□□□□ -2.15
ABCA13-204ENST00000435803 KRTAP2-4Q9BYR9 128 aa1.64□□□□□ -2.15
ABCA13-204ENST00000435803 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
ABCA13-204ENST00000435803 SPRR2BP35325 72 aa1.64□□□□□ -2.15
ABCA13-204ENST00000435803 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
ABCA13-204ENST00000435803 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
ABCA13-204ENST00000435803 LCE2CQ5TA81 110 aa1.62□□□□□ -2.15
ABCA13-204ENST00000435803 EPPK1P58107 5090 aaKnown RBP1.61□□□□□ -2.15
ABCA13-204ENST00000435803 RNF213Q63HN8 5207 aa1.59□□□□□ -2.16
ABCA13-204ENST00000435803 UBR4Q5T4S7 5183 aa1.59□□□□□ -2.16
ABCA13-204ENST00000435803 LCE2AQ5TA79 106 aaPredicted RBP1.57□□□□□ -2.16
ABCA13-204ENST00000435803 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
ABCA13-204ENST00000435803 MT1MQ8N339 61 aa1.57□□□□□ -2.16
ABCA13-204ENST00000435803 KRTAP9-3Q9BYQ3 159 aa1.57□□□□□ -2.16
ABCA13-204ENST00000435803 ABCA13Q86UQ4 5058 aa1.57□□□□□ -2.16
ABCA13-204ENST00000435803 LCE2BO14633 110 aa1.56□□□□□ -2.16
ABCA13-204ENST00000435803 KMT2DO14686 5537 aa1.55□□□□□ -2.16
ABCA13-204ENST00000435803 LCE3BQ5TA77 95 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms