RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 A0A1B0GU69 56 aa6.35□□□□□ -1.39
CTCFL-209ENST00000433949 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
CTCFL-209ENST00000433949 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
CTCFL-209ENST00000433949 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
CTCFL-209ENST00000433949 LCA10Q71F78 164 aa6.33□□□□□ -1.4
CTCFL-209ENST00000433949 RPL37P61927 97 aaKnown RBP6.31□□□□□ -1.4
CTCFL-209ENST00000433949 A6NN06 94 aa6.29□□□□□ -1.4
CTCFL-209ENST00000433949 XP32Q5T750 250 aa6.28□□□□□ -1.4
CTCFL-209ENST00000433949 LRP2P98164 4655 aa6.28□□□□□ -1.4
CTCFL-209ENST00000433949 COX6B2Q6YFQ2 88 aa6.27□□□□□ -1.4
CTCFL-209ENST00000433949 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.4
CTCFL-209ENST00000433949 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
CTCFL-209ENST00000433949 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
CTCFL-209ENST00000433949 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
CTCFL-209ENST00000433949 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
CTCFL-209ENST00000433949 TPRXLQ17RH7 258 aa6.23□□□□□ -1.41
CTCFL-209ENST00000433949 UQCR11O14957 56 aa6.23□□□□□ -1.41
CTCFL-209ENST00000433949 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
CTCFL-209ENST00000433949 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
CTCFL-209ENST00000433949 UBR4Q5T4S7 5183 aa6.14□□□□□ -1.43
CTCFL-209ENST00000433949 MUC2Q02817 5179 aa6.12□□□□□ -1.43
CTCFL-209ENST00000433949 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
CTCFL-209ENST00000433949 A0A1B0GU33 70 aa6.06□□□□□ -1.44
CTCFL-209ENST00000433949 S4R3F8 94 aa6.06□□□□□ -1.44
CTCFL-209ENST00000433949 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
CTCFL-209ENST00000433949 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
CTCFL-209ENST00000433949 H3BS24 57 aa6.02□□□□□ -1.45
CTCFL-209ENST00000433949 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
CTCFL-209ENST00000433949 H0YAA0 97 aa5.99□□□□□ -1.45
CTCFL-209ENST00000433949 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
CTCFL-209ENST00000433949 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
CTCFL-209ENST00000433949 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
CTCFL-209ENST00000433949 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
CTCFL-209ENST00000433949 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
CTCFL-209ENST00000433949 CSAG1Q6PB30 78 aa5.9□□□□□ -1.46
CTCFL-209ENST00000433949 K7ERS5 55 aa5.87□□□□□ -1.47
CTCFL-209ENST00000433949 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
CTCFL-209ENST00000433949 P0C880 135 aa5.8□□□□□ -1.48
CTCFL-209ENST00000433949 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
CTCFL-209ENST00000433949 LCE2BO14633 110 aa5.76□□□□□ -1.49
CTCFL-209ENST00000433949 M0QZ58 72 aa5.75□□□□□ -1.49
CTCFL-209ENST00000433949 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
CTCFL-209ENST00000433949 A0A0D9SG42 100 aa5.71□□□□□ -1.49
CTCFL-209ENST00000433949 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
CTCFL-209ENST00000433949 ROMO1P60602 79 aa5.64□□□□□ -1.51
CTCFL-209ENST00000433949 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
CTCFL-209ENST00000433949 R4GN34 69 aa5.62□□□□□ -1.51
CTCFL-209ENST00000433949 KRTAP25-1Q3LHN0 102 aa5.62□□□□□ -1.51
CTCFL-209ENST00000433949 M0R2T5 61 aa5.61□□□□□ -1.51
CTCFL-209ENST00000433949 MT1HP80294 61 aa5.6□□□□□ -1.51
CTCFL-209ENST00000433949 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
CTCFL-209ENST00000433949 LCE2AQ5TA79 106 aaPredicted RBP5.6□□□□□ -1.51
CTCFL-209ENST00000433949 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
CTCFL-209ENST00000433949 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
CTCFL-209ENST00000433949 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
CTCFL-209ENST00000433949 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
CTCFL-209ENST00000433949 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
CTCFL-209ENST00000433949 KRTAP9-8Q9BYQ0 159 aa5.36□□□□□ -1.55
CTCFL-209ENST00000433949 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
CTCFL-209ENST00000433949 MT2AP02795 61 aa5.34□□□□□ -1.55
CTCFL-209ENST00000433949 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
CTCFL-209ENST00000433949 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
CTCFL-209ENST00000433949 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
CTCFL-209ENST00000433949 MT1FP04733 61 aa5.32□□□□□ -1.56
CTCFL-209ENST00000433949 KRTAP9-6A0A140TA67 174 aa5.31□□□□□ -1.56
CTCFL-209ENST00000433949 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
CTCFL-209ENST00000433949 CAMK2N1Q7Z7J9 78 aa5.29□□□□□ -1.56
CTCFL-209ENST00000433949 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
CTCFL-209ENST00000433949 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
CTCFL-209ENST00000433949 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
CTCFL-209ENST00000433949 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
CTCFL-209ENST00000433949 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
CTCFL-209ENST00000433949 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
CTCFL-209ENST00000433949 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
CTCFL-209ENST00000433949 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
CTCFL-209ENST00000433949 PP632Q6XCG6 107 aa5.15□□□□□ -1.58
CTCFL-209ENST00000433949 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
CTCFL-209ENST00000433949 USH2AO75445 5202 aa5.13□□□□□ -1.59
CTCFL-209ENST00000433949 TNP1P09430 55 aa5.1□□□□□ -1.59
CTCFL-209ENST00000433949 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
CTCFL-209ENST00000433949 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
CTCFL-209ENST00000433949 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
CTCFL-209ENST00000433949 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
CTCFL-209ENST00000433949 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
CTCFL-209ENST00000433949 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
CTCFL-209ENST00000433949 MT1BP07438 61 aa4.97□□□□□ -1.61
CTCFL-209ENST00000433949 SSPOA2VEC9 5147 aa4.94□□□□□ -1.62
CTCFL-209ENST00000433949 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
CTCFL-209ENST00000433949 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
CTCFL-209ENST00000433949 MT1XP80297 61 aa4.84□□□□□ -1.63
CTCFL-209ENST00000433949 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
CTCFL-209ENST00000433949 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
CTCFL-209ENST00000433949 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
CTCFL-209ENST00000433949 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
CTCFL-209ENST00000433949 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
CTCFL-209ENST00000433949 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
CTCFL-209ENST00000433949 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
CTCFL-209ENST00000433949 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
CTCFL-209ENST00000433949 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
CTCFL-209ENST00000433949 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms