RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 A8MU10 97 aa1.75□□□□□ -2.13
SHPRH-205ENST00000433355 VPS13BQ7Z7G8 4022 aa1.75□□□□□ -2.13
SHPRH-205ENST00000433355 DNAH1Q9P2D7 4330 aa1.75□□□□□ -2.13
SHPRH-205ENST00000433355 DNAH10Q8IVF4 4471 aa1.75□□□□□ -2.13
SHPRH-205ENST00000433355 DNAH6Q9C0G6 4158 aa1.75□□□□□ -2.13
SHPRH-205ENST00000433355 ZNF469Q96JG9 3925 aaPredicted RBP1.75□□□□□ -2.13
SHPRH-205ENST00000433355 INE1O15225 51 aa1.74□□□□□ -2.13
SHPRH-205ENST00000433355 HUWE1Q7Z6Z7 4374 aaKnown RBP1.73□□□□□ -2.13
SHPRH-205ENST00000433355 HYDINQ4G0P3 5121 aa1.72□□□□□ -2.13
SHPRH-205ENST00000433355 SPRR2GQ9BYE4 73 aa1.72□□□□□ -2.13
SHPRH-205ENST00000433355 LCE2CQ5TA81 110 aa1.71□□□□□ -2.14
SHPRH-205ENST00000433355 CSMD2Q7Z408 3487 aa1.71□□□□□ -2.14
SHPRH-205ENST00000433355 KRTAP12-2P59991 146 aa1.71□□□□□ -2.14
SHPRH-205ENST00000433355 RYR2Q92736 4967 aa1.71□□□□□ -2.14
SHPRH-205ENST00000433355 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
SHPRH-205ENST00000433355 PRKDCP78527 4128 aaKnown RBP1.7□□□□□ -2.14
SHPRH-205ENST00000433355 NDUFAF8A1L188 74 aa1.69□□□□□ -2.14
SHPRH-205ENST00000433355 LCE2AQ5TA79 106 aaPredicted RBP1.68□□□□□ -2.14
SHPRH-205ENST00000433355 KRTAP15-1Q3LI76 137 aa1.66□□□□□ -2.14
SHPRH-205ENST00000433355 KMT2AQ03164 3969 aa1.66□□□□□ -2.14
SHPRH-205ENST00000433355 FRAS1Q86XX4 4008 aa1.66□□□□□ -2.14
SHPRH-205ENST00000433355 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.14
SHPRH-205ENST00000433355 KRTAP10-10P60014 251 aa1.65□□□□□ -2.14
SHPRH-205ENST00000433355 DNAH17Q9UFH2 4485 aa1.64□□□□□ -2.15
SHPRH-205ENST00000433355 LCE2BO14633 110 aa1.63□□□□□ -2.15
SHPRH-205ENST00000433355 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
SHPRH-205ENST00000433355 LRP1BQ9NZR2 4599 aa1.63□□□□□ -2.15
SHPRH-205ENST00000433355 KRTAP19-8Q3LI54 63 aa1.63□□□□□ -2.15
SHPRH-205ENST00000433355 KIAA1109Q2LD37 5005 aa1.63□□□□□ -2.15
SHPRH-205ENST00000433355 DNHD1Q96M86 4753 aa1.63□□□□□ -2.15
SHPRH-205ENST00000433355 KRTAP17-1Q9BYP8 105 aa1.62□□□□□ -2.15
SHPRH-205ENST00000433355 PKHD1P08F94 4074 aa1.62□□□□□ -2.15
SHPRH-205ENST00000433355 DYNC2H1Q8NCM8 4307 aaKnown RBP1.61□□□□□ -2.15
SHPRH-205ENST00000433355 DYNC1H1Q14204 4646 aaKnown RBP1.6□□□□□ -2.15
SHPRH-205ENST00000433355 SPRR5A0A1B0GTR4 108 aa1.6□□□□□ -2.15
SHPRH-205ENST00000433355 KMT2CQ8NEZ4 4911 aaKnown RBP1.6□□□□□ -2.15
SHPRH-205ENST00000433355 DNAH11Q96DT5 4516 aa1.59□□□□□ -2.15
SHPRH-205ENST00000433355 DNAH2Q9P225 4427 aa1.59□□□□□ -2.15
SHPRH-205ENST00000433355 RYR3Q15413 4870 aa1.59□□□□□ -2.16
SHPRH-205ENST00000433355 DNAH5Q8TE73 4624 aa1.59□□□□□ -2.16
SHPRH-205ENST00000433355 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
SHPRH-205ENST00000433355 ANK3Q12955 4377 aaKnown RBP1.58□□□□□ -2.16
SHPRH-205ENST00000433355 MYCBP2O75592 4640 aa1.58□□□□□ -2.16
SHPRH-205ENST00000433355 STARD9Q9P2P6 4700 aa1.57□□□□□ -2.16
SHPRH-205ENST00000433355 RNF213Q63HN8 5207 aa1.57□□□□□ -2.16
SHPRH-205ENST00000433355 ABCA13Q86UQ4 5058 aa1.57□□□□□ -2.16
SHPRH-205ENST00000433355 DNAH9Q9NYC9 4486 aa1.56□□□□□ -2.16
SHPRH-205ENST00000433355 UBR4Q5T4S7 5183 aa1.55□□□□□ -2.16
SHPRH-205ENST00000433355 LORP23490 312 aaPredicted RBP1.54□□□□□ -2.16
SHPRH-205ENST00000433355 EPPK1P58107 5090 aaKnown RBP1.54□□□□□ -2.16
SHPRH-205ENST00000433355 VPS13DQ5THJ4 4388 aa1.53□□□□□ -2.16
SHPRH-205ENST00000433355 FAT2Q9NYQ8 4349 aa1.53□□□□□ -2.16
SHPRH-205ENST00000433355 HERC2O95714 4834 aa1.53□□□□□ -2.17
SHPRH-205ENST00000433355 MT2AP02795 61 aa1.52□□□□□ -2.17
SHPRH-205ENST00000433355 BIRC6Q9NR09 4857 aa1.52□□□□□ -2.17
SHPRH-205ENST00000433355 APOBP04114 4563 aaKnown RBP1.52□□□□□ -2.17
SHPRH-205ENST00000433355 PLECQ15149 4684 aaKnown RBP1.51□□□□□ -2.17
SHPRH-205ENST00000433355 HSPG2P98160 4391 aa1.51□□□□□ -2.17
SHPRH-205ENST00000433355 MT1HP80294 61 aa1.5□□□□□ -2.17
SHPRH-205ENST00000433355 LRP1Q07954 4544 aaKnown RBP1.5□□□□□ -2.17
SHPRH-205ENST00000433355 SACSQ9NZJ4 4579 aa1.5□□□□□ -2.17
SHPRH-205ENST00000433355 KRTAP19-1Q8IUB9 90 aa1.5□□□□□ -2.17
SHPRH-205ENST00000433355 PKHD1L1Q86WI1 4243 aa1.49□□□□□ -2.17
SHPRH-205ENST00000433355 KRTAP19-2Q3LHN2 52 aa1.48□□□□□ -2.17
SHPRH-205ENST00000433355 DNAH8Q96JB1 4490 aa1.46□□□□□ -2.18
SHPRH-205ENST00000433355 HERC1Q15751 4861 aa1.46□□□□□ -2.18
SHPRH-205ENST00000433355 KRTAP10-5P60370 271 aa1.45□□□□□ -2.18
SHPRH-205ENST00000433355 KRTAP4-5Q9BYR2 181 aa1.45□□□□□ -2.18
SHPRH-205ENST00000433355 MT1FP04733 61 aa1.44□□□□□ -2.18
SHPRH-205ENST00000433355 LCE3CQ5T5A8 94 aa1.44□□□□□ -2.18
SHPRH-205ENST00000433355 KRTAP4-1Q9BYQ7 146 aa1.43□□□□□ -2.18
SHPRH-205ENST00000433355 HMCN2Q8NDA2 5059 aa1.42□□□□□ -2.18
SHPRH-205ENST00000433355 LCE3AQ5TA76 89 aa1.42□□□□□ -2.18
SHPRH-205ENST00000433355 MT1XP80297 61 aa1.42□□□□□ -2.18
SHPRH-205ENST00000433355 PKD1P98161 4303 aa1.42□□□□□ -2.18
SHPRH-205ENST00000433355 KRTAP9-8Q9BYQ0 159 aa1.41□□□□□ -2.18
SHPRH-205ENST00000433355 KRTAP9-3Q9BYQ3 159 aa1.41□□□□□ -2.18
SHPRH-205ENST00000433355 FAT3Q8TDW7 4589 aa1.41□□□□□ -2.18
SHPRH-205ENST00000433355 MT1GP13640 62 aa1.4□□□□□ -2.18
SHPRH-205ENST00000433355 MUC17Q685J3 4493 aa1.4□□□□□ -2.19
SHPRH-205ENST00000433355 MT1BP07438 61 aa1.39□□□□□ -2.19
SHPRH-205ENST00000433355 KRTAP19-6Q3LI70 58 aa1.39□□□□□ -2.19
SHPRH-205ENST00000433355 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
SHPRH-205ENST00000433355 LCE1FQ5T754 118 aa1.38□□□□□ -2.19
SHPRH-205ENST00000433355 KRTAP10-7P60409 375 aaPredicted RBP1.38□□□□□ -2.19
SHPRH-205ENST00000433355 MT1LQ93083 61 aa1.37□□□□□ -2.19
SHPRH-205ENST00000433355 FAT1Q14517 4588 aa1.37□□□□□ -2.19
SHPRH-205ENST00000433355 MT1EP04732 61 aa1.36□□□□□ -2.19
SHPRH-205ENST00000433355 USH2AO75445 5202 aa1.35□□□□□ -2.19
SHPRH-205ENST00000433355 TNXBP22105 4242 aa1.34□□□□□ -2.19
SHPRH-205ENST00000433355 LCE1AQ5T7P2 110 aa1.34□□□□□ -2.19
SHPRH-205ENST00000433355 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
SHPRH-205ENST00000433355 LRP2P98164 4655 aa1.31□□□□□ -2.2
SHPRH-205ENST00000433355 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
SHPRH-205ENST00000433355 KRTAP2-3P0C7H8 128 aa1.3□□□□□ -2.2
SHPRH-205ENST00000433355 KRTAP2-4Q9BYR9 128 aa1.3□□□□□ -2.2
SHPRH-205ENST00000433355 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
SHPRH-205ENST00000433355 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
SHPRH-205ENST00000433355 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
SHPRH-205ENST00000433355 MT1MQ8N339 61 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms