RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.65
PKNOX1-203ENST00000432907 LYSTQ99698 3801 aa4.71□□□□□ -1.66
PKNOX1-203ENST00000432907 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
PKNOX1-203ENST00000432907 DYNC2H1Q8NCM8 4307 aaKnown RBP4.68□□□□□ -1.66
PKNOX1-203ENST00000432907 MT1HL1P0DM35 61 aa4.66□□□□□ -1.66
PKNOX1-203ENST00000432907 VPS13DQ5THJ4 4388 aa4.6□□□□□ -1.67
PKNOX1-203ENST00000432907 PLECQ15149 4684 aaKnown RBP4.59□□□□□ -1.67
PKNOX1-203ENST00000432907 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
PKNOX1-203ENST00000432907 DNAH7Q8WXX0 4024 aa4.58□□□□□ -1.68
PKNOX1-203ENST00000432907 DNHD1Q96M86 4753 aa4.56□□□□□ -1.68
PKNOX1-203ENST00000432907 DNAH8Q96JB1 4490 aa4.55□□□□□ -1.68
PKNOX1-203ENST00000432907 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
PKNOX1-203ENST00000432907 HECTD4Q9Y4D8 3996 aa4.53□□□□□ -1.68
PKNOX1-203ENST00000432907 DNAH17Q9UFH2 4485 aa4.52□□□□□ -1.69
PKNOX1-203ENST00000432907 DNAH11Q96DT5 4516 aa4.51□□□□□ -1.69
PKNOX1-203ENST00000432907 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
PKNOX1-203ENST00000432907 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
PKNOX1-203ENST00000432907 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
PKNOX1-203ENST00000432907 PRKDCP78527 4128 aaKnown RBP4.47□□□□□ -1.69
PKNOX1-203ENST00000432907 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
PKNOX1-203ENST00000432907 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
PKNOX1-203ENST00000432907 FRAS1Q86XX4 4008 aa4.47□□□□□ -1.69
PKNOX1-203ENST00000432907 STARD9Q9P2P6 4700 aa4.46□□□□□ -1.69
PKNOX1-203ENST00000432907 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
PKNOX1-203ENST00000432907 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
PKNOX1-203ENST00000432907 DYNC1H1Q14204 4646 aaKnown RBP4.41□□□□□ -1.7
PKNOX1-203ENST00000432907 DNAH6Q9C0G6 4158 aa4.41□□□□□ -1.7
PKNOX1-203ENST00000432907 KMT2AQ03164 3969 aa4.38□□□□□ -1.71
PKNOX1-203ENST00000432907 LRP1BQ9NZR2 4599 aa4.36□□□□□ -1.71
PKNOX1-203ENST00000432907 FAT2Q9NYQ8 4349 aa4.33□□□□□ -1.72
PKNOX1-203ENST00000432907 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
PKNOX1-203ENST00000432907 PKD1P98161 4303 aa4.28□□□□□ -1.72
PKNOX1-203ENST00000432907 SACSQ9NZJ4 4579 aa4.26□□□□□ -1.73
PKNOX1-203ENST00000432907 FAT1Q14517 4588 aa4.24□□□□□ -1.73
PKNOX1-203ENST00000432907 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
PKNOX1-203ENST00000432907 RYR2Q92736 4967 aa4.18□□□□□ -1.74
PKNOX1-203ENST00000432907 RYR1P21817 5038 aa4.15□□□□□ -1.74
PKNOX1-203ENST00000432907 HYDINQ4G0P3 5121 aa4.14□□□□□ -1.75
PKNOX1-203ENST00000432907 PKHD1L1Q86WI1 4243 aa4.14□□□□□ -1.75
PKNOX1-203ENST00000432907 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
PKNOX1-203ENST00000432907 RYR3Q15413 4870 aa4.12□□□□□ -1.75
PKNOX1-203ENST00000432907 KRTAP17-1Q9BYP8 105 aa4.1□□□□□ -1.75
PKNOX1-203ENST00000432907 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
PKNOX1-203ENST00000432907 KIAA1109Q2LD37 5005 aa4.09□□□□□ -1.75
PKNOX1-203ENST00000432907 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
PKNOX1-203ENST00000432907 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.76
PKNOX1-203ENST00000432907 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
PKNOX1-203ENST00000432907 MT1HP80294 61 aa4□□□□□ -1.77
PKNOX1-203ENST00000432907 HSPG2P98160 4391 aa3.99□□□□□ -1.77
PKNOX1-203ENST00000432907 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
PKNOX1-203ENST00000432907 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
PKNOX1-203ENST00000432907 FAT3Q8TDW7 4589 aa3.96□□□□□ -1.78
PKNOX1-203ENST00000432907 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
PKNOX1-203ENST00000432907 TNXBP22105 4242 aa3.94□□□□□ -1.78
PKNOX1-203ENST00000432907 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
PKNOX1-203ENST00000432907 HERC2O95714 4834 aa3.92□□□□□ -1.78
PKNOX1-203ENST00000432907 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.78
PKNOX1-203ENST00000432907 MT2AP02795 61 aa3.89□□□□□ -1.79
PKNOX1-203ENST00000432907 KMT2CQ8NEZ4 4911 aaKnown RBP3.88□□□□□ -1.79
PKNOX1-203ENST00000432907 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
PKNOX1-203ENST00000432907 MT1FP04733 61 aa3.81□□□□□ -1.8
PKNOX1-203ENST00000432907 HERC1Q15751 4861 aa3.78□□□□□ -1.8
PKNOX1-203ENST00000432907 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
PKNOX1-203ENST00000432907 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
PKNOX1-203ENST00000432907 EPPK1P58107 5090 aaKnown RBP3.73□□□□□ -1.81
PKNOX1-203ENST00000432907 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
PKNOX1-203ENST00000432907 KRTAP19-1Q8IUB9 90 aa3.72□□□□□ -1.81
PKNOX1-203ENST00000432907 LCE2CQ5TA81 110 aa3.71□□□□□ -1.82
PKNOX1-203ENST00000432907 LRP2P98164 4655 aa3.68□□□□□ -1.82
PKNOX1-203ENST00000432907 KRTAP19-8Q3LI54 63 aa3.68□□□□□ -1.82
PKNOX1-203ENST00000432907 LPAP08519 4548 aa3.67□□□□□ -1.82
PKNOX1-203ENST00000432907 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
PKNOX1-203ENST00000432907 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
PKNOX1-203ENST00000432907 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
PKNOX1-203ENST00000432907 MT1XP80297 61 aa3.63□□□□□ -1.83
PKNOX1-203ENST00000432907 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
PKNOX1-203ENST00000432907 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
PKNOX1-203ENST00000432907 MUC17Q685J3 4493 aa3.59□□□□□ -1.83
PKNOX1-203ENST00000432907 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
PKNOX1-203ENST00000432907 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
PKNOX1-203ENST00000432907 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
PKNOX1-203ENST00000432907 MT1BP07438 61 aa3.54□□□□□ -1.84
PKNOX1-203ENST00000432907 MT1GP13640 62 aa3.52□□□□□ -1.85
PKNOX1-203ENST00000432907 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
PKNOX1-203ENST00000432907 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
PKNOX1-203ENST00000432907 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.85
PKNOX1-203ENST00000432907 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.85
PKNOX1-203ENST00000432907 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
PKNOX1-203ENST00000432907 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
PKNOX1-203ENST00000432907 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
PKNOX1-203ENST00000432907 KRTAP4-7Q9BYR0 210 aa3.41□□□□□ -1.86
PKNOX1-203ENST00000432907 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
PKNOX1-203ENST00000432907 LCE2BO14633 110 aa3.39□□□□□ -1.87
PKNOX1-203ENST00000432907 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
PKNOX1-203ENST00000432907 MUC2Q02817 5179 aa3.36□□□□□ -1.87
PKNOX1-203ENST00000432907 PRM1P04553 51 aa3.33□□□□□ -1.88
PKNOX1-203ENST00000432907 LCE2DQ5TA82 110 aaPredicted RBP3.33□□□□□ -1.88
PKNOX1-203ENST00000432907 MT1LQ93083 61 aa3.31□□□□□ -1.88
PKNOX1-203ENST00000432907 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
PKNOX1-203ENST00000432907 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms