RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 XP32Q5T750 250 aa7.69□□□□□ -1.18
RFTN1-203ENST00000432519 KRTAP4-5Q9BYR2 181 aa7.68□□□□□ -1.18
RFTN1-203ENST00000432519 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.19
RFTN1-203ENST00000432519 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
RFTN1-203ENST00000432519 PRAC1Q96KF2 57 aa7.59□□□□□ -1.19
RFTN1-203ENST00000432519 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
RFTN1-203ENST00000432519 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
RFTN1-203ENST00000432519 UQCR11O14957 56 aa7.53□□□□□ -1.2
RFTN1-203ENST00000432519 MIR22HGQ0VDD5 57 aa7.51□□□□□ -1.21
RFTN1-203ENST00000432519 HERC2O95714 4834 aa7.49□□□□□ -1.21
RFTN1-203ENST00000432519 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
RFTN1-203ENST00000432519 H3BS24 57 aa7.48□□□□□ -1.21
RFTN1-203ENST00000432519 H0YAA0 97 aa7.43□□□□□ -1.22
RFTN1-203ENST00000432519 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
RFTN1-203ENST00000432519 A0A1B0GU33 70 aa7.38□□□□□ -1.23
RFTN1-203ENST00000432519 LINC01554Q52M75 96 aa7.36□□□□□ -1.23
RFTN1-203ENST00000432519 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
RFTN1-203ENST00000432519 S4R3F8 94 aa7.34□□□□□ -1.23
RFTN1-203ENST00000432519 KRTAP10-6P60371 365 aaPredicted RBP7.33□□□□□ -1.24
RFTN1-203ENST00000432519 BIRC6Q9NR09 4857 aa7.32□□□□□ -1.24
RFTN1-203ENST00000432519 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
RFTN1-203ENST00000432519 MUC17Q685J3 4493 aa7.3□□□□□ -1.24
RFTN1-203ENST00000432519 MUC2Q02817 5179 aa7.28□□□□□ -1.24
RFTN1-203ENST00000432519 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
RFTN1-203ENST00000432519 J3QL48 77 aa7.24□□□□□ -1.25
RFTN1-203ENST00000432519 P0C880 135 aa7.24□□□□□ -1.25
RFTN1-203ENST00000432519 KRTAP4-1Q9BYQ7 146 aa7.23□□□□□ -1.25
RFTN1-203ENST00000432519 HERC1Q15751 4861 aa7.22□□□□□ -1.25
RFTN1-203ENST00000432519 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
RFTN1-203ENST00000432519 PCLOQ9Y6V0 5065 aa7.22□□□□□ -1.25
RFTN1-203ENST00000432519 A0A0D9SG42 100 aa7.14□□□□□ -1.27
RFTN1-203ENST00000432519 SEC61BP60468 96 aaKnown RBP7.12□□□□□ -1.27
RFTN1-203ENST00000432519 HMCN2Q8NDA2 5059 aa7.05□□□□□ -1.28
RFTN1-203ENST00000432519 KRTAP19-2Q3LHN2 52 aa7.04□□□□□ -1.28
RFTN1-203ENST00000432519 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
RFTN1-203ENST00000432519 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
RFTN1-203ENST00000432519 K7ERS5 55 aa6.95□□□□□ -1.3
RFTN1-203ENST00000432519 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
RFTN1-203ENST00000432519 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
RFTN1-203ENST00000432519 ROMO1P60602 79 aa6.92□□□□□ -1.3
RFTN1-203ENST00000432519 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
RFTN1-203ENST00000432519 KRTAP12-1P59990 96 aa6.91□□□□□ -1.3
RFTN1-203ENST00000432519 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
RFTN1-203ENST00000432519 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
RFTN1-203ENST00000432519 M0QZ58 72 aa6.86□□□□□ -1.31
RFTN1-203ENST00000432519 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
RFTN1-203ENST00000432519 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
RFTN1-203ENST00000432519 R4GN34 69 aa6.81□□□□□ -1.32
RFTN1-203ENST00000432519 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
RFTN1-203ENST00000432519 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
RFTN1-203ENST00000432519 NDUFAF8A1L188 74 aa6.53□□□□□ -1.36
RFTN1-203ENST00000432519 MT1HP80294 61 aa6.51□□□□□ -1.37
RFTN1-203ENST00000432519 M0R2T5 61 aa6.46□□□□□ -1.37
RFTN1-203ENST00000432519 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
RFTN1-203ENST00000432519 CAMK2N1Q7Z7J9 78 aa6.43□□□□□ -1.38
RFTN1-203ENST00000432519 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.39
RFTN1-203ENST00000432519 MT1FP04733 61 aa6.37□□□□□ -1.39
RFTN1-203ENST00000432519 MT2AP02795 61 aa6.35□□□□□ -1.39
RFTN1-203ENST00000432519 SPRR2GQ9BYE4 73 aa6.34□□□□□ -1.39
RFTN1-203ENST00000432519 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
RFTN1-203ENST00000432519 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
RFTN1-203ENST00000432519 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
RFTN1-203ENST00000432519 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
RFTN1-203ENST00000432519 TNP1P09430 55 aa6.12□□□□□ -1.43
RFTN1-203ENST00000432519 MT1BP07438 61 aa6.1□□□□□ -1.43
RFTN1-203ENST00000432519 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
RFTN1-203ENST00000432519 KRTAP9-3Q9BYQ3 159 aa6.08□□□□□ -1.44
RFTN1-203ENST00000432519 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
RFTN1-203ENST00000432519 USH2AO75445 5202 aa6.05□□□□□ -1.44
RFTN1-203ENST00000432519 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
RFTN1-203ENST00000432519 KRTAP10-5P60370 271 aa6□□□□□ -1.45
RFTN1-203ENST00000432519 MT1XP80297 61 aa5.99□□□□□ -1.45
RFTN1-203ENST00000432519 LCE2AQ5TA79 106 aaPredicted RBP5.94□□□□□ -1.46
RFTN1-203ENST00000432519 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
RFTN1-203ENST00000432519 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
RFTN1-203ENST00000432519 LCE2BO14633 110 aa5.92□□□□□ -1.46
RFTN1-203ENST00000432519 KRTAP10-7P60409 375 aaPredicted RBP5.83□□□□□ -1.48
RFTN1-203ENST00000432519 KMT2DO14686 5537 aa5.81□□□□□ -1.48
RFTN1-203ENST00000432519 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
RFTN1-203ENST00000432519 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
RFTN1-203ENST00000432519 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
RFTN1-203ENST00000432519 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
RFTN1-203ENST00000432519 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
RFTN1-203ENST00000432519 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
RFTN1-203ENST00000432519 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
RFTN1-203ENST00000432519 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
RFTN1-203ENST00000432519 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
RFTN1-203ENST00000432519 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
RFTN1-203ENST00000432519 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
RFTN1-203ENST00000432519 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
RFTN1-203ENST00000432519 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
RFTN1-203ENST00000432519 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
RFTN1-203ENST00000432519 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
RFTN1-203ENST00000432519 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
RFTN1-203ENST00000432519 MT1EP04732 61 aa5.19□□□□□ -1.58
RFTN1-203ENST00000432519 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
RFTN1-203ENST00000432519 LCE2DQ5TA82 110 aaPredicted RBP5.17□□□□□ -1.58
RFTN1-203ENST00000432519 MT1LQ93083 61 aa5.15□□□□□ -1.59
RFTN1-203ENST00000432519 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
RFTN1-203ENST00000432519 INE1O15225 51 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms