RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 NDUFC1O43677 76 aa5.37□□□□□ -1.55
CHD4-202ENST00000430771 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
CHD4-202ENST00000430771 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
CHD4-202ENST00000430771 LCA10Q71F78 164 aa5.33□□□□□ -1.56
CHD4-202ENST00000430771 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
CHD4-202ENST00000430771 CCDC179H3BU77 68 aa5.3□□□□□ -1.56
CHD4-202ENST00000430771 ACYP2P14621 99 aa5.3□□□□□ -1.56
CHD4-202ENST00000430771 H7BZZ5 65 aa5.29□□□□□ -1.56
CHD4-202ENST00000430771 CSAG1Q6PB30 78 aa5.29□□□□□ -1.56
CHD4-202ENST00000430771 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
CHD4-202ENST00000430771 CHKB-CPT1BH3BT56 60 aa5.25□□□□□ -1.57
CHD4-202ENST00000430771 ATP5EP56381 51 aaPredicted RBP5.22□□□□□ -1.57
CHD4-202ENST00000430771 SPTSSBQ8NFR3 76 aa5.22□□□□□ -1.57
CHD4-202ENST00000430771 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
CHD4-202ENST00000430771 MT2AP02795 61 aa5.2□□□□□ -1.58
CHD4-202ENST00000430771 TMEM258P61165 79 aa5.18□□□□□ -1.58
CHD4-202ENST00000430771 COA5Q86WW8 74 aa5.18□□□□□ -1.58
CHD4-202ENST00000430771 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
CHD4-202ENST00000430771 H0YAA0 97 aa5.15□□□□□ -1.59
CHD4-202ENST00000430771 MT1FP04733 61 aa5.15□□□□□ -1.59
CHD4-202ENST00000430771 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
CHD4-202ENST00000430771 PCP4P48539 62 aa5.11□□□□□ -1.59
CHD4-202ENST00000430771 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
CHD4-202ENST00000430771 CRIPTQ9P021 101 aa5.05□□□□□ -1.6
CHD4-202ENST00000430771 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
CHD4-202ENST00000430771 SERP1Q9Y6X1 66 aa5□□□□□ -1.61
CHD4-202ENST00000430771 SEC61GP60059 68 aa4.99□□□□□ -1.61
CHD4-202ENST00000430771 P0C880 135 aa4.98□□□□□ -1.61
CHD4-202ENST00000430771 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
CHD4-202ENST00000430771 R4GN34 69 aa4.96□□□□□ -1.62
CHD4-202ENST00000430771 KRTAP19-1Q8IUB9 90 aa4.94□□□□□ -1.62
CHD4-202ENST00000430771 M0QZ58 72 aa4.93□□□□□ -1.62
CHD4-202ENST00000430771 A0A1B0GU69 56 aa4.92□□□□□ -1.62
CHD4-202ENST00000430771 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
CHD4-202ENST00000430771 KRTAP9-6A0A140TA67 174 aa4.88□□□□□ -1.63
CHD4-202ENST00000430771 Q5VV11 94 aa4.88□□□□□ -1.63
CHD4-202ENST00000430771 USH2AO75445 5202 aa4.87□□□□□ -1.63
CHD4-202ENST00000430771 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
CHD4-202ENST00000430771 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
CHD4-202ENST00000430771 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
CHD4-202ENST00000430771 V9GYY9 64 aa4.85□□□□□ -1.63
CHD4-202ENST00000430771 A0A1B0GU33 70 aa4.83□□□□□ -1.64
CHD4-202ENST00000430771 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
CHD4-202ENST00000430771 SMIM26A0A096LP01 95 aa4.82□□□□□ -1.64
CHD4-202ENST00000430771 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
CHD4-202ENST00000430771 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
CHD4-202ENST00000430771 MT1BP07438 61 aa4.81□□□□□ -1.64
CHD4-202ENST00000430771 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
CHD4-202ENST00000430771 Q1T7F1 81 aa4.78□□□□□ -1.64
CHD4-202ENST00000430771 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
CHD4-202ENST00000430771 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
CHD4-202ENST00000430771 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
CHD4-202ENST00000430771 A6NN06 94 aa4.76□□□□□ -1.65
CHD4-202ENST00000430771 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
CHD4-202ENST00000430771 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
CHD4-202ENST00000430771 UQCR11O14957 56 aa4.72□□□□□ -1.65
CHD4-202ENST00000430771 PSPHP1O15172 72 aa4.71□□□□□ -1.66
CHD4-202ENST00000430771 A0A0D9SG42 100 aa4.7□□□□□ -1.66
CHD4-202ENST00000430771 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
CHD4-202ENST00000430771 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
CHD4-202ENST00000430771 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
CHD4-202ENST00000430771 A8MU10 97 aa4.63□□□□□ -1.67
CHD4-202ENST00000430771 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
CHD4-202ENST00000430771 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
CHD4-202ENST00000430771 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
CHD4-202ENST00000430771 A6NED7 52 aa4.61□□□□□ -1.67
CHD4-202ENST00000430771 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
CHD4-202ENST00000430771 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
CHD4-202ENST00000430771 MT1XP80297 61 aa4.6□□□□□ -1.67
CHD4-202ENST00000430771 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
CHD4-202ENST00000430771 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
CHD4-202ENST00000430771 K7ERS5 55 aa4.53□□□□□ -1.68
CHD4-202ENST00000430771 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
CHD4-202ENST00000430771 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
CHD4-202ENST00000430771 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
CHD4-202ENST00000430771 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
CHD4-202ENST00000430771 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
CHD4-202ENST00000430771 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
CHD4-202ENST00000430771 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
CHD4-202ENST00000430771 TNP1P09430 55 aa4.34□□□□□ -1.71
CHD4-202ENST00000430771 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
CHD4-202ENST00000430771 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
CHD4-202ENST00000430771 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
CHD4-202ENST00000430771 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
CHD4-202ENST00000430771 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
CHD4-202ENST00000430771 KMT2DO14686 5537 aa4.26□□□□□ -1.73
CHD4-202ENST00000430771 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
CHD4-202ENST00000430771 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
CHD4-202ENST00000430771 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
CHD4-202ENST00000430771 ROMO1P60602 79 aa4.24□□□□□ -1.73
CHD4-202ENST00000430771 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
CHD4-202ENST00000430771 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
CHD4-202ENST00000430771 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
CHD4-202ENST00000430771 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
CHD4-202ENST00000430771 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
CHD4-202ENST00000430771 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
CHD4-202ENST00000430771 MT1EP04732 61 aa4.07□□□□□ -1.76
CHD4-202ENST00000430771 SPRR2EP22531 72 aa4.07□□□□□ -1.76
CHD4-202ENST00000430771 SPRR2BP35325 72 aa4.07□□□□□ -1.76
CHD4-202ENST00000430771 SPRR2AP35326 72 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms