RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 PKHD1L1Q86WI1 4243 aa5□□□□□ -1.61
NUP98-207ENST00000429801 MMP24-AS1A0A0U1RRL7 71 aa4.99□□□□□ -1.61
NUP98-207ENST00000429801 SPINT4Q6UDR6 99 aa4.98□□□□□ -1.61
NUP98-207ENST00000429801 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
NUP98-207ENST00000429801 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
NUP98-207ENST00000429801 HERC2O95714 4834 aa4.95□□□□□ -1.62
NUP98-207ENST00000429801 DMAC1Q96GE9 116 aa4.94□□□□□ -1.62
NUP98-207ENST00000429801 SPINK1P00995 79 aa4.94□□□□□ -1.62
NUP98-207ENST00000429801 KRTAP10-8P60410 259 aa4.94□□□□□ -1.62
NUP98-207ENST00000429801 ACYP2P14621 99 aa4.93□□□□□ -1.62
NUP98-207ENST00000429801 Q5W150 140 aa4.92□□□□□ -1.62
NUP98-207ENST00000429801 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
NUP98-207ENST00000429801 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
NUP98-207ENST00000429801 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
NUP98-207ENST00000429801 TP53AIP1Q9HCN2 124 aa4.9□□□□□ -1.62
NUP98-207ENST00000429801 MYCBP2O75592 4640 aa4.9□□□□□ -1.63
NUP98-207ENST00000429801 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
NUP98-207ENST00000429801 TNXBP22105 4242 aa4.87□□□□□ -1.63
NUP98-207ENST00000429801 Q96NJ1 140 aa4.87□□□□□ -1.63
NUP98-207ENST00000429801 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
NUP98-207ENST00000429801 H0YAA0 97 aa4.85□□□□□ -1.63
NUP98-207ENST00000429801 K7ERS5 55 aa4.84□□□□□ -1.63
NUP98-207ENST00000429801 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
NUP98-207ENST00000429801 TPRXLQ17RH7 258 aa4.8□□□□□ -1.64
NUP98-207ENST00000429801 DMBT1Q9UGM3 2413 aaPredicted RBP4.79□□□□□ -1.64
NUP98-207ENST00000429801 A0A1B0GVX0 72 aa4.78□□□□□ -1.64
NUP98-207ENST00000429801 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
NUP98-207ENST00000429801 MRPL34Q9BQ48 92 aaKnown RBP4.76□□□□□ -1.65
NUP98-207ENST00000429801 PCLOQ9Y6V0 5065 aa4.76□□□□□ -1.65
NUP98-207ENST00000429801 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
NUP98-207ENST00000429801 C9orf92A6NGG3 77 aa4.69□□□□□ -1.66
NUP98-207ENST00000429801 HERC1Q15751 4861 aa4.62□□□□□ -1.67
NUP98-207ENST00000429801 XP32Q5T750 250 aa4.62□□□□□ -1.67
NUP98-207ENST00000429801 A0A1B0GU33 70 aa4.62□□□□□ -1.67
NUP98-207ENST00000429801 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
NUP98-207ENST00000429801 IGKV2-30P06310 120 aa4.58□□□□□ -1.68
NUP98-207ENST00000429801 RPL37P61927 97 aaKnown RBP4.58□□□□□ -1.68
NUP98-207ENST00000429801 LPAP08519 4548 aa4.58□□□□□ -1.68
NUP98-207ENST00000429801 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
NUP98-207ENST00000429801 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
NUP98-207ENST00000429801 LRP2P98164 4655 aa4.53□□□□□ -1.68
NUP98-207ENST00000429801 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
NUP98-207ENST00000429801 COX6B2Q6YFQ2 88 aa4.46□□□□□ -1.7
NUP98-207ENST00000429801 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
NUP98-207ENST00000429801 A0A0D9SG42 100 aa4.41□□□□□ -1.7
NUP98-207ENST00000429801 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
NUP98-207ENST00000429801 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
NUP98-207ENST00000429801 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
NUP98-207ENST00000429801 UBR4Q5T4S7 5183 aa4.35□□□□□ -1.71
NUP98-207ENST00000429801 PLAC4Q8WY50 150 aa4.34□□□□□ -1.72
NUP98-207ENST00000429801 MUC2Q02817 5179 aa4.32□□□□□ -1.72
NUP98-207ENST00000429801 RNF213Q63HN8 5207 aa4.28□□□□□ -1.72
NUP98-207ENST00000429801 S4R3F8 94 aa4.28□□□□□ -1.72
NUP98-207ENST00000429801 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
NUP98-207ENST00000429801 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
NUP98-207ENST00000429801 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
NUP98-207ENST00000429801 KRTAP10-6P60371 365 aaPredicted RBP4.23□□□□□ -1.73
NUP98-207ENST00000429801 R4GN34 69 aa4.21□□□□□ -1.74
NUP98-207ENST00000429801 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.75
NUP98-207ENST00000429801 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
NUP98-207ENST00000429801 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
NUP98-207ENST00000429801 MT1HP80294 61 aa4.13□□□□□ -1.75
NUP98-207ENST00000429801 M0R2T5 61 aa4.11□□□□□ -1.75
NUP98-207ENST00000429801 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
NUP98-207ENST00000429801 INE1O15225 51 aa3.94□□□□□ -1.78
NUP98-207ENST00000429801 MT2AP02795 61 aa3.93□□□□□ -1.78
NUP98-207ENST00000429801 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
NUP98-207ENST00000429801 MT1FP04733 61 aa3.9□□□□□ -1.78
NUP98-207ENST00000429801 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
NUP98-207ENST00000429801 M0QZ58 72 aa3.88□□□□□ -1.79
NUP98-207ENST00000429801 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
NUP98-207ENST00000429801 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
NUP98-207ENST00000429801 KRTAP19-1Q8IUB9 90 aa3.8□□□□□ -1.8
NUP98-207ENST00000429801 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
NUP98-207ENST00000429801 KRTAP19-8Q3LI54 63 aa3.73□□□□□ -1.81
NUP98-207ENST00000429801 MT1BP07438 61 aa3.67□□□□□ -1.82
NUP98-207ENST00000429801 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
NUP98-207ENST00000429801 USH2AO75445 5202 aa3.63□□□□□ -1.83
NUP98-207ENST00000429801 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
NUP98-207ENST00000429801 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
NUP98-207ENST00000429801 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.84
NUP98-207ENST00000429801 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
NUP98-207ENST00000429801 FSIP2Q5CZC0 6907 aa3.56□□□□□ -1.84
NUP98-207ENST00000429801 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
NUP98-207ENST00000429801 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
NUP98-207ENST00000429801 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
NUP98-207ENST00000429801 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
NUP98-207ENST00000429801 MT1XP80297 61 aa3.53□□□□□ -1.84
NUP98-207ENST00000429801 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
NUP98-207ENST00000429801 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
NUP98-207ENST00000429801 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
NUP98-207ENST00000429801 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
NUP98-207ENST00000429801 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
NUP98-207ENST00000429801 TNP1P09430 55 aa3.44□□□□□ -1.86
NUP98-207ENST00000429801 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.86
NUP98-207ENST00000429801 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.86
NUP98-207ENST00000429801 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
NUP98-207ENST00000429801 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
NUP98-207ENST00000429801 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
NUP98-207ENST00000429801 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms