RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 MT1FP04733 61 aa7.07□□□□□ -1.28
GARNL3-204ENST00000429629 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
GARNL3-204ENST00000429629 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
GARNL3-204ENST00000429629 NDUFC1O43677 76 aa7.03□□□□□ -1.28
GARNL3-204ENST00000429629 C20orf197Q8N268 126 aa7.01□□□□□ -1.29
GARNL3-204ENST00000429629 COX7CP15954 63 aa7□□□□□ -1.29
GARNL3-204ENST00000429629 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
GARNL3-204ENST00000429629 SNURFQ9Y675 71 aa6.99□□□□□ -1.29
GARNL3-204ENST00000429629 SPANXA2-OT1Q8N9U9 137 aa6.98□□□□□ -1.29
GARNL3-204ENST00000429629 ACYP2P14621 99 aa6.96□□□□□ -1.3
GARNL3-204ENST00000429629 H0YAA0 97 aa6.94□□□□□ -1.3
GARNL3-204ENST00000429629 ANAPC13Q9BS18 74 aa6.88□□□□□ -1.31
GARNL3-204ENST00000429629 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
GARNL3-204ENST00000429629 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
GARNL3-204ENST00000429629 CRIPTQ9P021 101 aa6.85□□□□□ -1.31
GARNL3-204ENST00000429629 SPTSSBQ8NFR3 76 aa6.84□□□□□ -1.31
GARNL3-204ENST00000429629 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.31
GARNL3-204ENST00000429629 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
GARNL3-204ENST00000429629 H7BZZ5 65 aa6.81□□□□□ -1.32
GARNL3-204ENST00000429629 USH2AO75445 5202 aa6.8□□□□□ -1.32
GARNL3-204ENST00000429629 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
GARNL3-204ENST00000429629 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
GARNL3-204ENST00000429629 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
GARNL3-204ENST00000429629 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
GARNL3-204ENST00000429629 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
GARNL3-204ENST00000429629 CYSTM1Q9H1C7 97 aa6.75□□□□□ -1.33
GARNL3-204ENST00000429629 CCDC179H3BU77 68 aa6.71□□□□□ -1.34
GARNL3-204ENST00000429629 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
GARNL3-204ENST00000429629 COA5Q86WW8 74 aa6.69□□□□□ -1.34
GARNL3-204ENST00000429629 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
GARNL3-204ENST00000429629 P0C880 135 aa6.64□□□□□ -1.35
GARNL3-204ENST00000429629 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
GARNL3-204ENST00000429629 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
GARNL3-204ENST00000429629 Q5VV11 94 aa6.62□□□□□ -1.35
GARNL3-204ENST00000429629 MT1BP07438 61 aa6.6□□□□□ -1.35
GARNL3-204ENST00000429629 R4GN34 69 aa6.59□□□□□ -1.35
GARNL3-204ENST00000429629 TMEM258P61165 79 aa6.55□□□□□ -1.36
GARNL3-204ENST00000429629 M0QZ58 72 aa6.53□□□□□ -1.36
GARNL3-204ENST00000429629 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-204ENST00000429629 SEC61GP60059 68 aa6.5□□□□□ -1.37
GARNL3-204ENST00000429629 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
GARNL3-204ENST00000429629 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
GARNL3-204ENST00000429629 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
GARNL3-204ENST00000429629 A6NN06 94 aa6.39□□□□□ -1.39
GARNL3-204ENST00000429629 LINC01554Q52M75 96 aa6.36□□□□□ -1.39
GARNL3-204ENST00000429629 A0A1B0GU33 70 aa6.35□□□□□ -1.39
GARNL3-204ENST00000429629 A0A1B0GU69 56 aa6.35□□□□□ -1.39
GARNL3-204ENST00000429629 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
GARNL3-204ENST00000429629 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
GARNL3-204ENST00000429629 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
GARNL3-204ENST00000429629 PRO2289Q9P1D8 64 aa6.32□□□□□ -1.4
GARNL3-204ENST00000429629 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
GARNL3-204ENST00000429629 PCP4P48539 62 aa6.29□□□□□ -1.4
GARNL3-204ENST00000429629 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
GARNL3-204ENST00000429629 MT1XP80297 61 aa6.26□□□□□ -1.41
GARNL3-204ENST00000429629 SPATA8Q6RVD6 105 aa6.2□□□□□ -1.42
GARNL3-204ENST00000429629 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
GARNL3-204ENST00000429629 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
GARNL3-204ENST00000429629 V9GYY9 64 aa6.18□□□□□ -1.42
GARNL3-204ENST00000429629 RPS28P62857 69 aaKnown RBP6.16□□□□□ -1.42
GARNL3-204ENST00000429629 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
GARNL3-204ENST00000429629 A0A0D9SG42 100 aa6.13□□□□□ -1.43
GARNL3-204ENST00000429629 Q1T7F1 81 aa6.13□□□□□ -1.43
GARNL3-204ENST00000429629 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
GARNL3-204ENST00000429629 UQCR11O14957 56 aa6.1□□□□□ -1.43
GARNL3-204ENST00000429629 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
GARNL3-204ENST00000429629 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
GARNL3-204ENST00000429629 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
GARNL3-204ENST00000429629 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
GARNL3-204ENST00000429629 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
GARNL3-204ENST00000429629 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.44
GARNL3-204ENST00000429629 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
GARNL3-204ENST00000429629 A8MU10 97 aa6.03□□□□□ -1.44
GARNL3-204ENST00000429629 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
GARNL3-204ENST00000429629 PSPHP1O15172 72 aa5.96□□□□□ -1.46
GARNL3-204ENST00000429629 KRTAP5-9P26371 169 aa5.95□□□□□ -1.46
GARNL3-204ENST00000429629 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
GARNL3-204ENST00000429629 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
GARNL3-204ENST00000429629 KRTAP9-9Q9BYP9 154 aa5.89□□□□□ -1.47
GARNL3-204ENST00000429629 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
GARNL3-204ENST00000429629 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
GARNL3-204ENST00000429629 KMT2DO14686 5537 aa5.86□□□□□ -1.47
GARNL3-204ENST00000429629 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
GARNL3-204ENST00000429629 K7ERS5 55 aa5.82□□□□□ -1.48
GARNL3-204ENST00000429629 A6NED7 52 aa5.81□□□□□ -1.48
GARNL3-204ENST00000429629 H3BS24 57 aa5.79□□□□□ -1.48
GARNL3-204ENST00000429629 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
GARNL3-204ENST00000429629 SPRR2FQ96RM1 72 aa5.77□□□□□ -1.49
GARNL3-204ENST00000429629 MUC12Q9UKN1 5478 aa5.76□□□□□ -1.49
GARNL3-204ENST00000429629 TNP1P09430 55 aa5.75□□□□□ -1.49
GARNL3-204ENST00000429629 NEBP20929 6669 aa5.72□□□□□ -1.49
GARNL3-204ENST00000429629 MDN1Q9NU22 5596 aa5.7□□□□□ -1.5
GARNL3-204ENST00000429629 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
GARNL3-204ENST00000429629 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
GARNL3-204ENST00000429629 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
GARNL3-204ENST00000429629 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
GARNL3-204ENST00000429629 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
GARNL3-204ENST00000429629 SPRR2EP22531 72 aa5.6□□□□□ -1.51
GARNL3-204ENST00000429629 SPRR2BP35325 72 aa5.6□□□□□ -1.51
GARNL3-204ENST00000429629 SPRR2AP35326 72 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms