RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
RHBDF1-204ENST00000428730 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
RHBDF1-204ENST00000428730 FAT1Q14517 4588 aa8.45□□□□□ -1.06
RHBDF1-204ENST00000428730 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
RHBDF1-204ENST00000428730 KRTAP15-1Q3LI76 137 aa8.44□□□□□ -1.06
RHBDF1-204ENST00000428730 DNHD1Q96M86 4753 aa8.4□□□□□ -1.06
RHBDF1-204ENST00000428730 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
RHBDF1-204ENST00000428730 S4R3F8 94 aa8.36□□□□□ -1.07
RHBDF1-204ENST00000428730 DYNC1H1Q14204 4646 aaKnown RBP8.34□□□□□ -1.07
RHBDF1-204ENST00000428730 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
RHBDF1-204ENST00000428730 APOBP04114 4563 aaKnown RBP8.32□□□□□ -1.08
RHBDF1-204ENST00000428730 HSPG2P98160 4391 aa8.28□□□□□ -1.08
RHBDF1-204ENST00000428730 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
RHBDF1-204ENST00000428730 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
RHBDF1-204ENST00000428730 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
RHBDF1-204ENST00000428730 FAT3Q8TDW7 4589 aa8.2□□□□□ -1.1
RHBDF1-204ENST00000428730 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
RHBDF1-204ENST00000428730 XP32Q5T750 250 aa8.15□□□□□ -1.11
RHBDF1-204ENST00000428730 TNXBP22105 4242 aa8.06□□□□□ -1.12
RHBDF1-204ENST00000428730 LPAP08519 4548 aa8.04□□□□□ -1.12
RHBDF1-204ENST00000428730 A0A1B0GVY2 172 aa7.92□□□□□ -1.14
RHBDF1-204ENST00000428730 M0QZ58 72 aa7.91□□□□□ -1.14
RHBDF1-204ENST00000428730 KMT2CQ8NEZ4 4911 aaKnown RBP7.88□□□□□ -1.15
RHBDF1-204ENST00000428730 A0A0A0MQY5 61 aa7.86□□□□□ -1.15
RHBDF1-204ENST00000428730 PLAC4Q8WY50 150 aa7.84□□□□□ -1.15
RHBDF1-204ENST00000428730 LRP2P98164 4655 aa7.81□□□□□ -1.16
RHBDF1-204ENST00000428730 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
RHBDF1-204ENST00000428730 R4GN34 69 aa7.74□□□□□ -1.17
RHBDF1-204ENST00000428730 RYR2Q92736 4967 aa7.7□□□□□ -1.18
RHBDF1-204ENST00000428730 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
RHBDF1-204ENST00000428730 Q5VSD8 79 aa7.68□□□□□ -1.18
RHBDF1-204ENST00000428730 KRTAP17-1Q9BYP8 105 aa7.61□□□□□ -1.19
RHBDF1-204ENST00000428730 MT1HL1P0DM35 61 aa7.55□□□□□ -1.2
RHBDF1-204ENST00000428730 RYR1P21817 5038 aa7.53□□□□□ -1.2
RHBDF1-204ENST00000428730 KIAA1109Q2LD37 5005 aa7.45□□□□□ -1.22
RHBDF1-204ENST00000428730 ABCA13Q86UQ4 5058 aa7.44□□□□□ -1.22
RHBDF1-204ENST00000428730 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
RHBDF1-204ENST00000428730 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
RHBDF1-204ENST00000428730 RYR3Q15413 4870 aa7.38□□□□□ -1.23
RHBDF1-204ENST00000428730 MUC17Q685J3 4493 aa7.35□□□□□ -1.23
RHBDF1-204ENST00000428730 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
RHBDF1-204ENST00000428730 SPRR5A0A1B0GTR4 108 aa7.15□□□□□ -1.26
RHBDF1-204ENST00000428730 KRTAP21-3Q3LHN1 58 aa7.15□□□□□ -1.26
RHBDF1-204ENST00000428730 TNP1P09430 55 aa7.13□□□□□ -1.27
RHBDF1-204ENST00000428730 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
RHBDF1-204ENST00000428730 MUC2Q02817 5179 aa7.12□□□□□ -1.27
RHBDF1-204ENST00000428730 KRTAP19-2Q3LHN2 52 aa7.11□□□□□ -1.27
RHBDF1-204ENST00000428730 EPPK1P58107 5090 aaKnown RBP7.04□□□□□ -1.28
RHBDF1-204ENST00000428730 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
RHBDF1-204ENST00000428730 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.3
RHBDF1-204ENST00000428730 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
RHBDF1-204ENST00000428730 PCLOQ9Y6V0 5065 aa6.92□□□□□ -1.3
RHBDF1-204ENST00000428730 HERC1Q15751 4861 aa6.83□□□□□ -1.32
RHBDF1-204ENST00000428730 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
RHBDF1-204ENST00000428730 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
RHBDF1-204ENST00000428730 FAT4Q6V0I7 4981 aa6.74□□□□□ -1.33
RHBDF1-204ENST00000428730 J3QL48 77 aa6.71□□□□□ -1.33
RHBDF1-204ENST00000428730 HERC2O95714 4834 aa6.68□□□□□ -1.34
RHBDF1-204ENST00000428730 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
RHBDF1-204ENST00000428730 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
RHBDF1-204ENST00000428730 BIRC6Q9NR09 4857 aa6.62□□□□□ -1.35
RHBDF1-204ENST00000428730 INE1O15225 51 aa6.59□□□□□ -1.35
RHBDF1-204ENST00000428730 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
RHBDF1-204ENST00000428730 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
RHBDF1-204ENST00000428730 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
RHBDF1-204ENST00000428730 UBR4Q5T4S7 5183 aa6.45□□□□□ -1.38
RHBDF1-204ENST00000428730 M0R2T5 61 aa6.42□□□□□ -1.38
RHBDF1-204ENST00000428730 KRTAP12-3P60328 96 aa6.4□□□□□ -1.38
RHBDF1-204ENST00000428730 MT1FP04733 61 aa6.38□□□□□ -1.39
RHBDF1-204ENST00000428730 KRTAP10-12P60413 245 aa6.37□□□□□ -1.39
RHBDF1-204ENST00000428730 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
RHBDF1-204ENST00000428730 KRTAP10-5P60370 271 aa6.34□□□□□ -1.4
RHBDF1-204ENST00000428730 RNF213Q63HN8 5207 aa6.32□□□□□ -1.4
RHBDF1-204ENST00000428730 MT2AP02795 61 aa6.32□□□□□ -1.4
RHBDF1-204ENST00000428730 MT1XP80297 61 aa6.32□□□□□ -1.4
RHBDF1-204ENST00000428730 MT1HP80294 61 aa6.28□□□□□ -1.4
RHBDF1-204ENST00000428730 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
RHBDF1-204ENST00000428730 MT1BP07438 61 aa6.24□□□□□ -1.41
RHBDF1-204ENST00000428730 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
RHBDF1-204ENST00000428730 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
RHBDF1-204ENST00000428730 KMT2DO14686 5537 aa6.06□□□□□ -1.44
RHBDF1-204ENST00000428730 KRTAP19-5Q3LI72 72 aa6.04□□□□□ -1.44
RHBDF1-204ENST00000428730 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
RHBDF1-204ENST00000428730 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
RHBDF1-204ENST00000428730 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
RHBDF1-204ENST00000428730 USH2AO75445 5202 aa5.88□□□□□ -1.47
RHBDF1-204ENST00000428730 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
RHBDF1-204ENST00000428730 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
RHBDF1-204ENST00000428730 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
RHBDF1-204ENST00000428730 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
RHBDF1-204ENST00000428730 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
RHBDF1-204ENST00000428730 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
RHBDF1-204ENST00000428730 LCE2BO14633 110 aa5.67□□□□□ -1.5
RHBDF1-204ENST00000428730 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
RHBDF1-204ENST00000428730 MT1LQ93083 61 aa5.48□□□□□ -1.53
RHBDF1-204ENST00000428730 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
RHBDF1-204ENST00000428730 MT1EP04732 61 aa5.4□□□□□ -1.55
RHBDF1-204ENST00000428730 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
RHBDF1-204ENST00000428730 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
RHBDF1-204ENST00000428730 MT1GP13640 62 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms