RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 HUWE1Q7Z6Z7 4374 aaKnown RBP5.59□□□□□ -1.51
FGFR1-211ENST00000425967 VPS13CQ709C8 3753 aa5.57□□□□□ -1.52
FGFR1-211ENST00000425967 DNAH9Q9NYC9 4486 aa5.56□□□□□ -1.52
FGFR1-211ENST00000425967 KRTAP10-4P60372 401 aaPredicted RBP5.52□□□□□ -1.53
FGFR1-211ENST00000425967 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
FGFR1-211ENST00000425967 KRTAP4-5Q9BYR2 181 aa5.51□□□□□ -1.53
FGFR1-211ENST00000425967 DNAH1Q9P2D7 4330 aa5.49□□□□□ -1.53
FGFR1-211ENST00000425967 DNAH7Q8WXX0 4024 aa5.47□□□□□ -1.53
FGFR1-211ENST00000425967 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
FGFR1-211ENST00000425967 VPS13DQ5THJ4 4388 aa5.41□□□□□ -1.54
FGFR1-211ENST00000425967 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
FGFR1-211ENST00000425967 DNAH17Q9UFH2 4485 aa5.37□□□□□ -1.55
FGFR1-211ENST00000425967 LORP23490 312 aaPredicted RBP5.33□□□□□ -1.56
FGFR1-211ENST00000425967 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
FGFR1-211ENST00000425967 CSMD3Q7Z407 3707 aa5.3□□□□□ -1.56
FGFR1-211ENST00000425967 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
FGFR1-211ENST00000425967 DNAH8Q96JB1 4490 aa5.29□□□□□ -1.56
FGFR1-211ENST00000425967 DNAH10Q8IVF4 4471 aa5.27□□□□□ -1.57
FGFR1-211ENST00000425967 DNAH2Q9P225 4427 aa5.25□□□□□ -1.57
FGFR1-211ENST00000425967 PLECQ15149 4684 aaKnown RBP5.24□□□□□ -1.57
FGFR1-211ENST00000425967 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
FGFR1-211ENST00000425967 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
FGFR1-211ENST00000425967 PKHD1L1Q86WI1 4243 aa5.17□□□□□ -1.58
FGFR1-211ENST00000425967 FAT2Q9NYQ8 4349 aa5.14□□□□□ -1.59
FGFR1-211ENST00000425967 STARD9Q9P2P6 4700 aa5.14□□□□□ -1.59
FGFR1-211ENST00000425967 DNHD1Q96M86 4753 aa5.12□□□□□ -1.59
FGFR1-211ENST00000425967 FRAS1Q86XX4 4008 aa5.12□□□□□ -1.59
FGFR1-211ENST00000425967 DNAH11Q96DT5 4516 aa5.11□□□□□ -1.59
FGFR1-211ENST00000425967 DYNC1H1Q14204 4646 aaKnown RBP5.09□□□□□ -1.6
FGFR1-211ENST00000425967 LYSTQ99698 3801 aa5.06□□□□□ -1.6
FGFR1-211ENST00000425967 MT1HP80294 61 aa5.05□□□□□ -1.6
FGFR1-211ENST00000425967 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
FGFR1-211ENST00000425967 SACSQ9NZJ4 4579 aa5.02□□□□□ -1.61
FGFR1-211ENST00000425967 VPS13BQ7Z7G8 4022 aa5.01□□□□□ -1.61
FGFR1-211ENST00000425967 RYR2Q92736 4967 aa4.99□□□□□ -1.61
FGFR1-211ENST00000425967 HECTD4Q9Y4D8 3996 aa4.99□□□□□ -1.61
FGFR1-211ENST00000425967 MT2AP02795 61 aa4.99□□□□□ -1.61
FGFR1-211ENST00000425967 FAT1Q14517 4588 aa4.98□□□□□ -1.61
FGFR1-211ENST00000425967 PKD1P98161 4303 aa4.97□□□□□ -1.61
FGFR1-211ENST00000425967 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
FGFR1-211ENST00000425967 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
FGFR1-211ENST00000425967 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
FGFR1-211ENST00000425967 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.63
FGFR1-211ENST00000425967 LRP1BQ9NZR2 4599 aa4.85□□□□□ -1.63
FGFR1-211ENST00000425967 KMT2AQ03164 3969 aa4.85□□□□□ -1.63
FGFR1-211ENST00000425967 MT1FP04733 61 aa4.85□□□□□ -1.63
FGFR1-211ENST00000425967 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.64
FGFR1-211ENST00000425967 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
FGFR1-211ENST00000425967 RYR1P21817 5038 aa4.82□□□□□ -1.64
FGFR1-211ENST00000425967 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
FGFR1-211ENST00000425967 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
FGFR1-211ENST00000425967 HYDINQ4G0P3 5121 aa4.76□□□□□ -1.65
FGFR1-211ENST00000425967 BIRC6Q9NR09 4857 aa4.68□□□□□ -1.66
FGFR1-211ENST00000425967 HSPG2P98160 4391 aa4.67□□□□□ -1.66
FGFR1-211ENST00000425967 TNXBP22105 4242 aa4.65□□□□□ -1.67
FGFR1-211ENST00000425967 MYCBP2O75592 4640 aa4.61□□□□□ -1.67
FGFR1-211ENST00000425967 SPRR2EP22531 72 aa4.61□□□□□ -1.67
FGFR1-211ENST00000425967 SPRR2BP35325 72 aa4.61□□□□□ -1.67
FGFR1-211ENST00000425967 SPRR2AP35326 72 aa4.61□□□□□ -1.67
FGFR1-211ENST00000425967 MUC17Q685J3 4493 aa4.61□□□□□ -1.67
FGFR1-211ENST00000425967 FAT3Q8TDW7 4589 aa4.6□□□□□ -1.67
FGFR1-211ENST00000425967 RYR3Q15413 4870 aa4.6□□□□□ -1.67
FGFR1-211ENST00000425967 HERC2O95714 4834 aa4.58□□□□□ -1.68
FGFR1-211ENST00000425967 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
FGFR1-211ENST00000425967 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
FGFR1-211ENST00000425967 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
FGFR1-211ENST00000425967 KRTAP17-1Q9BYP8 105 aa4.53□□□□□ -1.68
FGFR1-211ENST00000425967 KMT2CQ8NEZ4 4911 aaKnown RBP4.53□□□□□ -1.68
FGFR1-211ENST00000425967 SPRR2DP22532 72 aa4.47□□□□□ -1.69
FGFR1-211ENST00000425967 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
FGFR1-211ENST00000425967 MT1XP80297 61 aa4.44□□□□□ -1.7
FGFR1-211ENST00000425967 LCE2BO14633 110 aa4.44□□□□□ -1.7
FGFR1-211ENST00000425967 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
FGFR1-211ENST00000425967 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
FGFR1-211ENST00000425967 HERC1Q15751 4861 aa4.41□□□□□ -1.7
FGFR1-211ENST00000425967 MT1GP13640 62 aa4.41□□□□□ -1.7
FGFR1-211ENST00000425967 MT1BP07438 61 aa4.38□□□□□ -1.71
FGFR1-211ENST00000425967 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
FGFR1-211ENST00000425967 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
FGFR1-211ENST00000425967 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
FGFR1-211ENST00000425967 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
FGFR1-211ENST00000425967 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
FGFR1-211ENST00000425967 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
FGFR1-211ENST00000425967 LRP2P98164 4655 aa4.26□□□□□ -1.73
FGFR1-211ENST00000425967 LCE2CQ5TA81 110 aa4.25□□□□□ -1.73
FGFR1-211ENST00000425967 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
FGFR1-211ENST00000425967 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
FGFR1-211ENST00000425967 PCLOQ9Y6V0 5065 aa4.2□□□□□ -1.74
FGFR1-211ENST00000425967 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
FGFR1-211ENST00000425967 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
FGFR1-211ENST00000425967 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
FGFR1-211ENST00000425967 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
FGFR1-211ENST00000425967 LPAP08519 4548 aa4.09□□□□□ -1.75
FGFR1-211ENST00000425967 MT1LQ93083 61 aa4.09□□□□□ -1.76
FGFR1-211ENST00000425967 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
FGFR1-211ENST00000425967 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
FGFR1-211ENST00000425967 MT1EP04732 61 aa4.04□□□□□ -1.76
FGFR1-211ENST00000425967 MT3P25713 68 aa3.98□□□□□ -1.77
FGFR1-211ENST00000425967 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.77
FGFR1-211ENST00000425967 MT1MQ8N339 61 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms