RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
VPS37A-202ENST00000425020 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
VPS37A-202ENST00000425020 TNP1P09430 55 aa4.98□□□□□ -1.61
VPS37A-202ENST00000425020 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
VPS37A-202ENST00000425020 KRTAP10-4P60372 401 aaPredicted RBP4.94□□□□□ -1.62
VPS37A-202ENST00000425020 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
VPS37A-202ENST00000425020 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
VPS37A-202ENST00000425020 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
VPS37A-202ENST00000425020 MT1HL1P0DM35 61 aa4.9□□□□□ -1.62
VPS37A-202ENST00000425020 VPS13DQ5THJ4 4388 aa4.89□□□□□ -1.63
VPS37A-202ENST00000425020 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
VPS37A-202ENST00000425020 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
VPS37A-202ENST00000425020 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
VPS37A-202ENST00000425020 DNAH7Q8WXX0 4024 aa4.87□□□□□ -1.63
VPS37A-202ENST00000425020 DNAH17Q9UFH2 4485 aa4.87□□□□□ -1.63
VPS37A-202ENST00000425020 DYNC1H1Q14204 4646 aaKnown RBP4.87□□□□□ -1.63
VPS37A-202ENST00000425020 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
VPS37A-202ENST00000425020 RYR1P21817 5038 aa4.85□□□□□ -1.63
VPS37A-202ENST00000425020 KIAA1109Q2LD37 5005 aa4.83□□□□□ -1.64
VPS37A-202ENST00000425020 DNAH6Q9C0G6 4158 aa4.83□□□□□ -1.64
VPS37A-202ENST00000425020 VPS13BQ7Z7G8 4022 aa4.81□□□□□ -1.64
VPS37A-202ENST00000425020 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
VPS37A-202ENST00000425020 LRP1Q07954 4544 aaKnown RBP4.8□□□□□ -1.64
VPS37A-202ENST00000425020 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
VPS37A-202ENST00000425020 SACSQ9NZJ4 4579 aa4.77□□□□□ -1.65
VPS37A-202ENST00000425020 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
VPS37A-202ENST00000425020 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
VPS37A-202ENST00000425020 HYDINQ4G0P3 5121 aa4.69□□□□□ -1.66
VPS37A-202ENST00000425020 PKHD1P08F94 4074 aa4.67□□□□□ -1.66
VPS37A-202ENST00000425020 RYR3Q15413 4870 aa4.66□□□□□ -1.66
VPS37A-202ENST00000425020 DNAH3Q8TD57 4116 aa4.65□□□□□ -1.66
VPS37A-202ENST00000425020 DYNC2H1Q8NCM8 4307 aaKnown RBP4.65□□□□□ -1.66
VPS37A-202ENST00000425020 HECTD4Q9Y4D8 3996 aa4.64□□□□□ -1.67
VPS37A-202ENST00000425020 LRP2P98164 4655 aa4.61□□□□□ -1.67
VPS37A-202ENST00000425020 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
VPS37A-202ENST00000425020 FAT2Q9NYQ8 4349 aa4.57□□□□□ -1.68
VPS37A-202ENST00000425020 KRTAP17-1Q9BYP8 105 aa4.57□□□□□ -1.68
VPS37A-202ENST00000425020 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
VPS37A-202ENST00000425020 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
VPS37A-202ENST00000425020 KMT2CQ8NEZ4 4911 aaKnown RBP4.52□□□□□ -1.69
VPS37A-202ENST00000425020 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.69
VPS37A-202ENST00000425020 LPAP08519 4548 aa4.4□□□□□ -1.71
VPS37A-202ENST00000425020 HERC2O95714 4834 aa4.38□□□□□ -1.71
VPS37A-202ENST00000425020 RYR2Q92736 4967 aa4.38□□□□□ -1.71
VPS37A-202ENST00000425020 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
VPS37A-202ENST00000425020 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
VPS37A-202ENST00000425020 HSPG2P98160 4391 aa4.34□□□□□ -1.71
VPS37A-202ENST00000425020 PKD1P98161 4303 aa4.31□□□□□ -1.72
VPS37A-202ENST00000425020 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
VPS37A-202ENST00000425020 PCLOQ9Y6V0 5065 aa4.28□□□□□ -1.72
VPS37A-202ENST00000425020 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
VPS37A-202ENST00000425020 MUC2Q02817 5179 aa4.24□□□□□ -1.73
VPS37A-202ENST00000425020 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.73
VPS37A-202ENST00000425020 MT1HP80294 61 aa4.17□□□□□ -1.74
VPS37A-202ENST00000425020 MT2AP02795 61 aa4.16□□□□□ -1.74
VPS37A-202ENST00000425020 MT1FP04733 61 aa4.15□□□□□ -1.74
VPS37A-202ENST00000425020 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
VPS37A-202ENST00000425020 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
VPS37A-202ENST00000425020 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
VPS37A-202ENST00000425020 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
VPS37A-202ENST00000425020 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
VPS37A-202ENST00000425020 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
VPS37A-202ENST00000425020 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
VPS37A-202ENST00000425020 HERC1Q15751 4861 aa4.05□□□□□ -1.76
VPS37A-202ENST00000425020 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
VPS37A-202ENST00000425020 TNXBP22105 4242 aa4.05□□□□□ -1.76
VPS37A-202ENST00000425020 KRTAP23-1A1A580 65 aa4.02□□□□□ -1.77
VPS37A-202ENST00000425020 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
VPS37A-202ENST00000425020 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
VPS37A-202ENST00000425020 BIRC6Q9NR09 4857 aa3.93□□□□□ -1.78
VPS37A-202ENST00000425020 MUC17Q685J3 4493 aa3.92□□□□□ -1.78
VPS37A-202ENST00000425020 LCE2CQ5TA81 110 aa3.92□□□□□ -1.78
VPS37A-202ENST00000425020 INE1O15225 51 aa3.92□□□□□ -1.78
VPS37A-202ENST00000425020 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
VPS37A-202ENST00000425020 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
VPS37A-202ENST00000425020 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
VPS37A-202ENST00000425020 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
VPS37A-202ENST00000425020 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
VPS37A-202ENST00000425020 MT1XP80297 61 aa3.85□□□□□ -1.79
VPS37A-202ENST00000425020 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
VPS37A-202ENST00000425020 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
VPS37A-202ENST00000425020 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
VPS37A-202ENST00000425020 HMCN2Q8NDA2 5059 aa3.84□□□□□ -1.79
VPS37A-202ENST00000425020 MT1BP07438 61 aa3.84□□□□□ -1.79
VPS37A-202ENST00000425020 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
VPS37A-202ENST00000425020 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
VPS37A-202ENST00000425020 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
VPS37A-202ENST00000425020 USH2AO75445 5202 aa3.72□□□□□ -1.81
VPS37A-202ENST00000425020 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
VPS37A-202ENST00000425020 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
VPS37A-202ENST00000425020 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
VPS37A-202ENST00000425020 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
VPS37A-202ENST00000425020 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
VPS37A-202ENST00000425020 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.82
VPS37A-202ENST00000425020 LCE2BO14633 110 aa3.65□□□□□ -1.82
VPS37A-202ENST00000425020 KMT2DO14686 5537 aa3.63□□□□□ -1.83
VPS37A-202ENST00000425020 MT1GP13640 62 aa3.58□□□□□ -1.84
VPS37A-202ENST00000425020 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
VPS37A-202ENST00000425020 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
VPS37A-202ENST00000425020 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms