RNA–Protein interactions for RNA: ENST00000424649.6

PXN-204, Transcript of paxillin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PXN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-204ENST00000424649 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
PXN-204ENST00000424649 P0C880 135 aa6.48□□□□□ -1.37
PXN-204ENST00000424649 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
PXN-204ENST00000424649 FAT3Q8TDW7 4589 aa6.45□□□□□ -1.38
PXN-204ENST00000424649 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
PXN-204ENST00000424649 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
PXN-204ENST00000424649 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
PXN-204ENST00000424649 RYR2Q92736 4967 aa6.38□□□□□ -1.39
PXN-204ENST00000424649 XP32Q5T750 250 aa6.37□□□□□ -1.39
PXN-204ENST00000424649 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
PXN-204ENST00000424649 NDUFAF8A1L188 74 aa6.34□□□□□ -1.4
PXN-204ENST00000424649 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
PXN-204ENST00000424649 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
PXN-204ENST00000424649 KMT2CQ8NEZ4 4911 aaKnown RBP6.31□□□□□ -1.4
PXN-204ENST00000424649 M0QZ58 72 aa6.3□□□□□ -1.4
PXN-204ENST00000424649 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
PXN-204ENST00000424649 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
PXN-204ENST00000424649 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
PXN-204ENST00000424649 R4GN34 69 aa6.28□□□□□ -1.4
PXN-204ENST00000424649 HSPG2P98160 4391 aa6.23□□□□□ -1.41
PXN-204ENST00000424649 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.41
PXN-204ENST00000424649 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.42
PXN-204ENST00000424649 LRP2P98164 4655 aa6.18□□□□□ -1.42
PXN-204ENST00000424649 PKHD1L1Q86WI1 4243 aa6.18□□□□□ -1.42
PXN-204ENST00000424649 RYR3Q15413 4870 aa6.16□□□□□ -1.42
PXN-204ENST00000424649 RYR1P21817 5038 aa6.16□□□□□ -1.42
PXN-204ENST00000424649 J3QL48 77 aa6.14□□□□□ -1.43
PXN-204ENST00000424649 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
PXN-204ENST00000424649 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
PXN-204ENST00000424649 LPAP08519 4548 aa6.13□□□□□ -1.43
PXN-204ENST00000424649 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
PXN-204ENST00000424649 TNXBP22105 4242 aa6.03□□□□□ -1.44
PXN-204ENST00000424649 MT1HL1P0DM35 61 aa5.99□□□□□ -1.45
PXN-204ENST00000424649 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
PXN-204ENST00000424649 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
PXN-204ENST00000424649 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
PXN-204ENST00000424649 SEC61BP60468 96 aaKnown RBP5.93□□□□□ -1.46
PXN-204ENST00000424649 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
PXN-204ENST00000424649 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
PXN-204ENST00000424649 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
PXN-204ENST00000424649 MUC2Q02817 5179 aa5.88□□□□□ -1.47
PXN-204ENST00000424649 ABCA13Q86UQ4 5058 aa5.86□□□□□ -1.47
PXN-204ENST00000424649 M0R2T5 61 aa5.82□□□□□ -1.48
PXN-204ENST00000424649 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
PXN-204ENST00000424649 TNP1P09430 55 aa5.63□□□□□ -1.51
PXN-204ENST00000424649 HERC2O95714 4834 aa5.61□□□□□ -1.51
PXN-204ENST00000424649 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
PXN-204ENST00000424649 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
PXN-204ENST00000424649 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
PXN-204ENST00000424649 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
PXN-204ENST00000424649 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
PXN-204ENST00000424649 HERC1Q15751 4861 aa5.46□□□□□ -1.54
PXN-204ENST00000424649 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
PXN-204ENST00000424649 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
PXN-204ENST00000424649 PCLOQ9Y6V0 5065 aa5.34□□□□□ -1.55
PXN-204ENST00000424649 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
PXN-204ENST00000424649 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
PXN-204ENST00000424649 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
PXN-204ENST00000424649 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
PXN-204ENST00000424649 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
PXN-204ENST00000424649 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
PXN-204ENST00000424649 MT1FP04733 61 aa5.08□□□□□ -1.6
PXN-204ENST00000424649 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
PXN-204ENST00000424649 MT1HP80294 61 aa5.05□□□□□ -1.6
PXN-204ENST00000424649 MT2AP02795 61 aa5.02□□□□□ -1.61
PXN-204ENST00000424649 SPRR2GQ9BYE4 73 aa5.01□□□□□ -1.61
PXN-204ENST00000424649 USH2AO75445 5202 aa5.01□□□□□ -1.61
PXN-204ENST00000424649 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
PXN-204ENST00000424649 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
PXN-204ENST00000424649 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
PXN-204ENST00000424649 KMT2DO14686 5537 aa4.97□□□□□ -1.61
PXN-204ENST00000424649 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
PXN-204ENST00000424649 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
PXN-204ENST00000424649 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
PXN-204ENST00000424649 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
PXN-204ENST00000424649 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
PXN-204ENST00000424649 MT1XP80297 61 aa4.82□□□□□ -1.64
PXN-204ENST00000424649 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
PXN-204ENST00000424649 MT1BP07438 61 aa4.8□□□□□ -1.64
PXN-204ENST00000424649 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
PXN-204ENST00000424649 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
PXN-204ENST00000424649 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
PXN-204ENST00000424649 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
PXN-204ENST00000424649 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
PXN-204ENST00000424649 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
PXN-204ENST00000424649 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
PXN-204ENST00000424649 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
PXN-204ENST00000424649 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
PXN-204ENST00000424649 INE1O15225 51 aa4.63□□□□□ -1.67
PXN-204ENST00000424649 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
PXN-204ENST00000424649 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
PXN-204ENST00000424649 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
PXN-204ENST00000424649 LCE2BO14633 110 aa4.54□□□□□ -1.68
PXN-204ENST00000424649 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
PXN-204ENST00000424649 FCGBPQ9Y6R7 5405 aaPredicted RBP4.52□□□□□ -1.69
PXN-204ENST00000424649 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.7
PXN-204ENST00000424649 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
PXN-204ENST00000424649 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
PXN-204ENST00000424649 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
PXN-204ENST00000424649 MT1GP13640 62 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms