RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 A0A1B0GU33 70 aa6.81□□□□□ -1.32
TOP2B-203ENST00000424225 KMT2CQ8NEZ4 4911 aaKnown RBP6.8□□□□□ -1.32
TOP2B-203ENST00000424225 COX6B2Q6YFQ2 88 aa6.78□□□□□ -1.32
TOP2B-203ENST00000424225 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
TOP2B-203ENST00000424225 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
TOP2B-203ENST00000424225 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
TOP2B-203ENST00000424225 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
TOP2B-203ENST00000424225 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
TOP2B-203ENST00000424225 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
TOP2B-203ENST00000424225 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
TOP2B-203ENST00000424225 SMR3BP02814 79 aaPredicted RBP6.69□□□□□ -1.34
TOP2B-203ENST00000424225 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
TOP2B-203ENST00000424225 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
TOP2B-203ENST00000424225 LRP2P98164 4655 aa6.65□□□□□ -1.34
TOP2B-203ENST00000424225 A0A0D9SG42 100 aa6.63□□□□□ -1.35
TOP2B-203ENST00000424225 RYR1P21817 5038 aa6.62□□□□□ -1.35
TOP2B-203ENST00000424225 BIRC6Q9NR09 4857 aa6.6□□□□□ -1.35
TOP2B-203ENST00000424225 RYR3Q15413 4870 aa6.59□□□□□ -1.36
TOP2B-203ENST00000424225 RPS29P62273 56 aaKnown RBP6.58□□□□□ -1.36
TOP2B-203ENST00000424225 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
TOP2B-203ENST00000424225 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
TOP2B-203ENST00000424225 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
TOP2B-203ENST00000424225 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
TOP2B-203ENST00000424225 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.37
TOP2B-203ENST00000424225 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
TOP2B-203ENST00000424225 HERC2O95714 4834 aa6.45□□□□□ -1.38
TOP2B-203ENST00000424225 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
TOP2B-203ENST00000424225 S4R3F8 94 aa6.4□□□□□ -1.39
TOP2B-203ENST00000424225 K7ERS5 55 aa6.38□□□□□ -1.39
TOP2B-203ENST00000424225 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
TOP2B-203ENST00000424225 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
TOP2B-203ENST00000424225 MUC17Q685J3 4493 aa6.35□□□□□ -1.39
TOP2B-203ENST00000424225 XP32Q5T750 250 aa6.34□□□□□ -1.39
TOP2B-203ENST00000424225 MUC2Q02817 5179 aa6.31□□□□□ -1.4
TOP2B-203ENST00000424225 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
TOP2B-203ENST00000424225 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.41
TOP2B-203ENST00000424225 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
TOP2B-203ENST00000424225 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
TOP2B-203ENST00000424225 Q5VSD8 79 aa6.08□□□□□ -1.44
TOP2B-203ENST00000424225 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
TOP2B-203ENST00000424225 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
TOP2B-203ENST00000424225 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
TOP2B-203ENST00000424225 M0QZ58 72 aa5.97□□□□□ -1.45
TOP2B-203ENST00000424225 KRTAP19-2Q3LHN2 52 aa5.93□□□□□ -1.46
TOP2B-203ENST00000424225 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.47
TOP2B-203ENST00000424225 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
TOP2B-203ENST00000424225 R4GN34 69 aa5.82□□□□□ -1.48
TOP2B-203ENST00000424225 J3QL48 77 aa5.73□□□□□ -1.49
TOP2B-203ENST00000424225 HERC1Q15751 4861 aa5.73□□□□□ -1.49
TOP2B-203ENST00000424225 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
TOP2B-203ENST00000424225 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
TOP2B-203ENST00000424225 A0A0A0MQY5 61 aa5.65□□□□□ -1.5
TOP2B-203ENST00000424225 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.51
TOP2B-203ENST00000424225 RNF213Q63HN8 5207 aa5.6□□□□□ -1.51
TOP2B-203ENST00000424225 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
TOP2B-203ENST00000424225 LUZP6Q538Z0 58 aa5.59□□□□□ -1.51
TOP2B-203ENST00000424225 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
TOP2B-203ENST00000424225 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
TOP2B-203ENST00000424225 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
TOP2B-203ENST00000424225 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
TOP2B-203ENST00000424225 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
TOP2B-203ENST00000424225 TNP1P09430 55 aa5.32□□□□□ -1.56
TOP2B-203ENST00000424225 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
TOP2B-203ENST00000424225 M0R2T5 61 aa5.28□□□□□ -1.56
TOP2B-203ENST00000424225 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
TOP2B-203ENST00000424225 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
TOP2B-203ENST00000424225 KMT2DO14686 5537 aa5.26□□□□□ -1.57
TOP2B-203ENST00000424225 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
TOP2B-203ENST00000424225 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
TOP2B-203ENST00000424225 USH2AO75445 5202 aa5.18□□□□□ -1.58
TOP2B-203ENST00000424225 MT1FP04733 61 aa5.17□□□□□ -1.58
TOP2B-203ENST00000424225 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
TOP2B-203ENST00000424225 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
TOP2B-203ENST00000424225 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
TOP2B-203ENST00000424225 MT1HP80294 61 aa5.09□□□□□ -1.59
TOP2B-203ENST00000424225 MT1XP80297 61 aa5.09□□□□□ -1.6
TOP2B-203ENST00000424225 MT2AP02795 61 aa5.08□□□□□ -1.6
TOP2B-203ENST00000424225 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
TOP2B-203ENST00000424225 MT1BP07438 61 aa5.05□□□□□ -1.6
TOP2B-203ENST00000424225 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
TOP2B-203ENST00000424225 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
TOP2B-203ENST00000424225 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
TOP2B-203ENST00000424225 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.62
TOP2B-203ENST00000424225 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
TOP2B-203ENST00000424225 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
TOP2B-203ENST00000424225 KRTAP10-10P60014 251 aa4.92□□□□□ -1.62
TOP2B-203ENST00000424225 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
TOP2B-203ENST00000424225 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
TOP2B-203ENST00000424225 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
TOP2B-203ENST00000424225 INE1O15225 51 aa4.8□□□□□ -1.64
TOP2B-203ENST00000424225 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
TOP2B-203ENST00000424225 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
TOP2B-203ENST00000424225 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
TOP2B-203ENST00000424225 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
TOP2B-203ENST00000424225 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
TOP2B-203ENST00000424225 LCE2BO14633 110 aa4.69□□□□□ -1.66
TOP2B-203ENST00000424225 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
TOP2B-203ENST00000424225 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
TOP2B-203ENST00000424225 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
TOP2B-203ENST00000424225 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms