RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 MT2AP02795 61 aa8.97□□□□□ -0.97
MCF2L-214ENST00000423251 KLKP1Q107X0 134 aa8.94□□□□□ -0.98
MCF2L-214ENST00000423251 C20orf197Q8N268 126 aa8.94□□□□□ -0.98
MCF2L-214ENST00000423251 S4R3F8 94 aa8.94□□□□□ -0.98
MCF2L-214ENST00000423251 FCGBPQ9Y6R7 5405 aaPredicted RBP8.91□□□□□ -0.98
MCF2L-214ENST00000423251 MT1FP04733 61 aa8.9□□□□□ -0.98
MCF2L-214ENST00000423251 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
MCF2L-214ENST00000423251 LCA10Q71F78 164 aa8.88□□□□□ -0.99
MCF2L-214ENST00000423251 LCE2BO14633 110 aa8.87□□□□□ -0.99
MCF2L-214ENST00000423251 NDUFC1O43677 76 aa8.87□□□□□ -0.99
MCF2L-214ENST00000423251 A8MUN3 132 aa8.86□□□□□ -0.99
MCF2L-214ENST00000423251 CSAG1Q6PB30 78 aa8.86□□□□□ -0.99
MCF2L-214ENST00000423251 SNURFQ9Y675 71 aa8.86□□□□□ -0.99
MCF2L-214ENST00000423251 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
MCF2L-214ENST00000423251 KRTAP9-3Q9BYQ3 159 aa8.81□□□□□ -1
MCF2L-214ENST00000423251 CCDC179H3BU77 68 aa8.8□□□□□ -1
MCF2L-214ENST00000423251 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
MCF2L-214ENST00000423251 PCP4P48539 62 aa8.79□□□□□ -1
MCF2L-214ENST00000423251 MACF1Q9UPN3 7388 aaKnown RBP8.73□□□□□ -1.01
MCF2L-214ENST00000423251 SPANXA2-OT1Q8N9U9 137 aa8.73□□□□□ -1.01
MCF2L-214ENST00000423251 DMAC1Q96GE9 116 aa8.71□□□□□ -1.02
MCF2L-214ENST00000423251 H7BZZ5 65 aa8.7□□□□□ -1.02
MCF2L-214ENST00000423251 SYNE2Q8WXH0 6885 aaKnown RBP8.68□□□□□ -1.02
MCF2L-214ENST00000423251 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-214ENST00000423251 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
MCF2L-214ENST00000423251 TMEM258P61165 79 aa8.63□□□□□ -1.03
MCF2L-214ENST00000423251 ACYP2P14621 99 aa8.59□□□□□ -1.03
MCF2L-214ENST00000423251 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
MCF2L-214ENST00000423251 H0YAA0 97 aa8.56□□□□□ -1.04
MCF2L-214ENST00000423251 CRIPTQ9P021 101 aa8.47□□□□□ -1.05
MCF2L-214ENST00000423251 SPRR2GQ9BYE4 73 aa8.46□□□□□ -1.06
MCF2L-214ENST00000423251 CHKB-CPT1BH3BT56 60 aa8.45□□□□□ -1.06
MCF2L-214ENST00000423251 ADM2Q7Z4H4 148 aa8.45□□□□□ -1.06
MCF2L-214ENST00000423251 SPTSSBQ8NFR3 76 aa8.42□□□□□ -1.06
MCF2L-214ENST00000423251 COA5Q86WW8 74 aa8.4□□□□□ -1.06
MCF2L-214ENST00000423251 KRTAP6-3Q3LI67 103 aa8.36□□□□□ -1.07
MCF2L-214ENST00000423251 KRTAP19-8Q3LI54 63 aa8.35□□□□□ -1.07
MCF2L-214ENST00000423251 SERP1Q9Y6X1 66 aa8.34□□□□□ -1.07
MCF2L-214ENST00000423251 Q5VV11 94 aa8.31□□□□□ -1.08
MCF2L-214ENST00000423251 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
MCF2L-214ENST00000423251 P0C880 135 aa8.3□□□□□ -1.08
MCF2L-214ENST00000423251 MT1BP07438 61 aa8.28□□□□□ -1.08
MCF2L-214ENST00000423251 R4GN34 69 aa8.21□□□□□ -1.1
MCF2L-214ENST00000423251 NEBP20929 6669 aa8.19□□□□□ -1.1
MCF2L-214ENST00000423251 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
MCF2L-214ENST00000423251 M0QZ58 72 aa8.15□□□□□ -1.1
MCF2L-214ENST00000423251 SEC61GP60059 68 aa8.11□□□□□ -1.11
MCF2L-214ENST00000423251 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
MCF2L-214ENST00000423251 SMIM26A0A096LP01 95 aa8.09□□□□□ -1.11
MCF2L-214ENST00000423251 A6NN06 94 aa8.09□□□□□ -1.11
MCF2L-214ENST00000423251 V9GYY9 64 aa8.08□□□□□ -1.12
MCF2L-214ENST00000423251 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
MCF2L-214ENST00000423251 PRR15LQ9BU68 103 aa8.03□□□□□ -1.12
MCF2L-214ENST00000423251 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
MCF2L-214ENST00000423251 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
MCF2L-214ENST00000423251 A0A1B0GU69 56 aa8□□□□□ -1.13
MCF2L-214ENST00000423251 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
MCF2L-214ENST00000423251 Q1T7F1 81 aa7.97□□□□□ -1.13
MCF2L-214ENST00000423251 KRTAP20-1Q3LI63 56 aa7.92□□□□□ -1.14
MCF2L-214ENST00000423251 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
MCF2L-214ENST00000423251 PRO2289Q9P1D8 64 aa7.88□□□□□ -1.15
MCF2L-214ENST00000423251 KRTAP5-9P26371 169 aa7.85□□□□□ -1.15
MCF2L-214ENST00000423251 MT1XP80297 61 aa7.85□□□□□ -1.15
MCF2L-214ENST00000423251 A0A1B0GU33 70 aa7.84□□□□□ -1.15
MCF2L-214ENST00000423251 KMT2DO14686 5537 aa7.82□□□□□ -1.16
MCF2L-214ENST00000423251 MDN1Q9NU22 5596 aa7.8□□□□□ -1.16
MCF2L-214ENST00000423251 PSPHP1O15172 72 aa7.79□□□□□ -1.16
MCF2L-214ENST00000423251 UQCR11O14957 56 aa7.74□□□□□ -1.17
MCF2L-214ENST00000423251 SPATA8Q6RVD6 105 aa7.73□□□□□ -1.17
MCF2L-214ENST00000423251 A0A0D9SG42 100 aa7.67□□□□□ -1.18
MCF2L-214ENST00000423251 A6NED7 52 aa7.63□□□□□ -1.19
MCF2L-214ENST00000423251 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
MCF2L-214ENST00000423251 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
MCF2L-214ENST00000423251 KRTAP2-3P0C7H8 128 aa7.59□□□□□ -1.19
MCF2L-214ENST00000423251 MIR22HGQ0VDD5 57 aa7.59□□□□□ -1.19
MCF2L-214ENST00000423251 KRTAP2-4Q9BYR9 128 aa7.59□□□□□ -1.19
MCF2L-214ENST00000423251 SPRR2FQ96RM1 72 aa7.57□□□□□ -1.2
MCF2L-214ENST00000423251 SPINT4Q6UDR6 99 aa7.56□□□□□ -1.2
MCF2L-214ENST00000423251 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
MCF2L-214ENST00000423251 SPRR2EP22531 72 aa7.54□□□□□ -1.2
MCF2L-214ENST00000423251 SPRR2BP35325 72 aa7.54□□□□□ -1.2
MCF2L-214ENST00000423251 SPRR2AP35326 72 aa7.54□□□□□ -1.2
MCF2L-214ENST00000423251 A8MU10 97 aa7.51□□□□□ -1.21
MCF2L-214ENST00000423251 KRTAP10-7P60409 375 aaPredicted RBP7.48□□□□□ -1.21
MCF2L-214ENST00000423251 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
MCF2L-214ENST00000423251 CDC42SE1Q9NRR8 79 aa7.46□□□□□ -1.22
MCF2L-214ENST00000423251 K7ERS5 55 aa7.43□□□□□ -1.22
MCF2L-214ENST00000423251 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
MCF2L-214ENST00000423251 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
MCF2L-214ENST00000423251 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
MCF2L-214ENST00000423251 LCE1AQ5T7P2 110 aa7.38□□□□□ -1.23
MCF2L-214ENST00000423251 BRK1Q8WUW1 75 aa7.34□□□□□ -1.23
MCF2L-214ENST00000423251 KRTAP2-2Q9BYT5 123 aa7.34□□□□□ -1.23
MCF2L-214ENST00000423251 KRTAP2-1Q9BYU5 128 aa7.34□□□□□ -1.23
MCF2L-214ENST00000423251 SPRR2DP22532 72 aa7.29□□□□□ -1.24
MCF2L-214ENST00000423251 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
MCF2L-214ENST00000423251 TNP1P09430 55 aa7.12□□□□□ -1.27
MCF2L-214ENST00000423251 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
MCF2L-214ENST00000423251 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
MCF2L-214ENST00000423251 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms