RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 ETDBQ3ZM63 59 aa8.06□□□□□ -1.12
SREBF1-206ENST00000423161 LOC101927531A0A1B0GV80 90 aa8.05□□□□□ -1.12
SREBF1-206ENST00000423161 F8W1H4 67 aa8.04□□□□□ -1.12
SREBF1-206ENST00000423161 KRTAP5-9P26371 169 aa8.04□□□□□ -1.12
SREBF1-206ENST00000423161 KRTAP20-1Q3LI63 56 aa8.01□□□□□ -1.13
SREBF1-206ENST00000423161 NDUFC1O43677 76 aa7.96□□□□□ -1.14
SREBF1-206ENST00000423161 H0YAA0 97 aa7.95□□□□□ -1.14
SREBF1-206ENST00000423161 KMT2DO14686 5537 aa7.93□□□□□ -1.14
SREBF1-206ENST00000423161 H0Y9P7 68 aa7.92□□□□□ -1.14
SREBF1-206ENST00000423161 UQCRQO14949 82 aa7.92□□□□□ -1.14
SREBF1-206ENST00000423161 ATOX1O00244 68 aa7.91□□□□□ -1.14
SREBF1-206ENST00000423161 ACYP1P07311 99 aa7.89□□□□□ -1.15
SREBF1-206ENST00000423161 HIST1H4AP62805 103 aaKnown RBP7.89□□□□□ -1.15
SREBF1-206ENST00000423161 ATP5EP2Q5VTU8 51 aa7.89□□□□□ -1.15
SREBF1-206ENST00000423161 MDN1Q9NU22 5596 aa7.88□□□□□ -1.15
SREBF1-206ENST00000423161 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
SREBF1-206ENST00000423161 A8MUN3 132 aa7.85□□□□□ -1.15
SREBF1-206ENST00000423161 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
SREBF1-206ENST00000423161 PCP4L1A6NKN8 68 aa7.82□□□□□ -1.16
SREBF1-206ENST00000423161 PRO2289Q9P1D8 64 aa7.81□□□□□ -1.16
SREBF1-206ENST00000423161 MT1XP80297 61 aa7.77□□□□□ -1.17
SREBF1-206ENST00000423161 LINC00208Q96KT6 92 aa7.77□□□□□ -1.17
SREBF1-206ENST00000423161 SPRR2FQ96RM1 72 aa7.77□□□□□ -1.17
SREBF1-206ENST00000423161 PLAC4Q8WY50 150 aa7.75□□□□□ -1.17
SREBF1-206ENST00000423161 KRTAP2-3P0C7H8 128 aa7.73□□□□□ -1.17
SREBF1-206ENST00000423161 KRTAP2-4Q9BYR9 128 aa7.73□□□□□ -1.17
SREBF1-206ENST00000423161 SPRR2EP22531 72 aa7.71□□□□□ -1.18
SREBF1-206ENST00000423161 SPRR2BP35325 72 aa7.71□□□□□ -1.18
SREBF1-206ENST00000423161 SPRR2AP35326 72 aa7.71□□□□□ -1.18
SREBF1-206ENST00000423161 MP68P56378 58 aa7.69□□□□□ -1.18
SREBF1-206ENST00000423161 R4GN34 69 aa7.69□□□□□ -1.18
SREBF1-206ENST00000423161 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
SREBF1-206ENST00000423161 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
SREBF1-206ENST00000423161 P0C880 135 aa7.66□□□□□ -1.18
SREBF1-206ENST00000423161 OCR1Q9BZK8 76 aa7.66□□□□□ -1.18
SREBF1-206ENST00000423161 C20orf197Q8N268 126 aa7.65□□□□□ -1.18
SREBF1-206ENST00000423161 M0QZ58 72 aa7.63□□□□□ -1.19
SREBF1-206ENST00000423161 KRTAP12-2P59991 146 aa7.62□□□□□ -1.19
SREBF1-206ENST00000423161 LCE1AQ5T7P2 110 aa7.56□□□□□ -1.2
SREBF1-206ENST00000423161 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
SREBF1-206ENST00000423161 H3BPC8 53 aa7.54□□□□□ -1.2
SREBF1-206ENST00000423161 LINC01554Q52M75 96 aa7.54□□□□□ -1.2
SREBF1-206ENST00000423161 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
SREBF1-206ENST00000423161 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
SREBF1-206ENST00000423161 KRTAP2-2Q9BYT5 123 aa7.47□□□□□ -1.21
SREBF1-206ENST00000423161 KRTAP2-1Q9BYU5 128 aa7.47□□□□□ -1.21
SREBF1-206ENST00000423161 SPRR2DP22532 72 aa7.46□□□□□ -1.22
SREBF1-206ENST00000423161 SCGB1A1P11684 91 aa7.42□□□□□ -1.22
SREBF1-206ENST00000423161 KRTAP10-7P60409 375 aaPredicted RBP7.42□□□□□ -1.22
SREBF1-206ENST00000423161 TRAV7A0A075B6U4 112 aa7.38□□□□□ -1.23
SREBF1-206ENST00000423161 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
SREBF1-206ENST00000423161 A0A1B0GV90 55 aa7.36□□□□□ -1.23
SREBF1-206ENST00000423161 MT-ATP8P03928 68 aa7.34□□□□□ -1.23
SREBF1-206ENST00000423161 ACYP2P14621 99 aa7.33□□□□□ -1.24
SREBF1-206ENST00000423161 J3QR89 54 aa7.32□□□□□ -1.24
SREBF1-206ENST00000423161 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
SREBF1-206ENST00000423161 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
SREBF1-206ENST00000423161 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
SREBF1-206ENST00000423161 SMIM20Q8N5G0 67 aa7.15□□□□□ -1.26
SREBF1-206ENST00000423161 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
SREBF1-206ENST00000423161 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
SREBF1-206ENST00000423161 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
SREBF1-206ENST00000423161 SPANXA2-OT1Q8N9U9 137 aa6.98□□□□□ -1.29
SREBF1-206ENST00000423161 KRTAP19-7Q3SYF9 63 aa6.94□□□□□ -1.3
SREBF1-206ENST00000423161 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
SREBF1-206ENST00000423161 K7ERU9 68 aa6.92□□□□□ -1.3
SREBF1-206ENST00000423161 MT1EP04732 61 aa6.9□□□□□ -1.3
SREBF1-206ENST00000423161 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.3
SREBF1-206ENST00000423161 KRTAP19-3Q7Z4W3 81 aa6.89□□□□□ -1.31
SREBF1-206ENST00000423161 A0A0D9SG42 100 aa6.83□□□□□ -1.32
SREBF1-206ENST00000423161 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
SREBF1-206ENST00000423161 COA5Q86WW8 74 aa6.82□□□□□ -1.32
SREBF1-206ENST00000423161 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
SREBF1-206ENST00000423161 SEC61GP60059 68 aa6.79□□□□□ -1.32
SREBF1-206ENST00000423161 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
SREBF1-206ENST00000423161 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
SREBF1-206ENST00000423161 GPR98Q8WXG9 6306 aa6.76□□□□□ -1.33
SREBF1-206ENST00000423161 SPINT4Q6UDR6 99 aa6.75□□□□□ -1.33
SREBF1-206ENST00000423161 CYSTM1Q9H1C7 97 aa6.75□□□□□ -1.33
SREBF1-206ENST00000423161 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
SREBF1-206ENST00000423161 MT1GP13640 62 aa6.7□□□□□ -1.34
SREBF1-206ENST00000423161 A0A1B0GU33 70 aa6.69□□□□□ -1.34
SREBF1-206ENST00000423161 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
SREBF1-206ENST00000423161 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
SREBF1-206ENST00000423161 LCE1DQ5T752 114 aa6.64□□□□□ -1.35
SREBF1-206ENST00000423161 MT1MQ8N339 61 aa6.59□□□□□ -1.35
SREBF1-206ENST00000423161 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
SREBF1-206ENST00000423161 MT1LQ93083 61 aa6.57□□□□□ -1.36
SREBF1-206ENST00000423161 COX7CP15954 63 aa6.54□□□□□ -1.36
SREBF1-206ENST00000423161 MT4P47944 62 aa6.54□□□□□ -1.36
SREBF1-206ENST00000423161 SMIM26A0A096LP01 95 aa6.51□□□□□ -1.37
SREBF1-206ENST00000423161 H7BZZ5 65 aa6.51□□□□□ -1.37
SREBF1-206ENST00000423161 HMCN1Q96RW7 5635 aa6.49□□□□□ -1.37
SREBF1-206ENST00000423161 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
SREBF1-206ENST00000423161 A0A1B0GU69 56 aa6.48□□□□□ -1.37
SREBF1-206ENST00000423161 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
SREBF1-206ENST00000423161 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
SREBF1-206ENST00000423161 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
SREBF1-206ENST00000423161 A8MU10 97 aa6.46□□□□□ -1.38
SREBF1-206ENST00000423161 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms